Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 1.2e-143 513.1 239 100.0
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 3.6e-124 448.4 240 87.5
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 2.1e-116 422.5 239 82.8
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 3.0e-115 418.7 244 82.4
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 9.1e-104 380.6 232 77.6
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 2.1e-100 369.4 239 74.1
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 5.7e-98 361.3 239 73.2
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 4.5e-95 351.7 242 72.7
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 5.9e-95 351.3 234 72.6
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 3.8e-94 348.6 231 72.3
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 1.3e-89 333.6 245 67.8
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 1.2e-87 327.0 233 68.7
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 2.7e-79 299.3 225 61.8
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 1.2e-76 290.4 227 62.6
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 8.9e-75 284.3 224 61.2
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 2.0e-74 283.1 230 58.3
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 4.9e-73 278.5 224 58.9
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 1.1e-72 277.3 225 58.7
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 2.0e-71 273.1 223 58.7
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 6.0e-71 271.6 224 58.5
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 1.0e-70 270.8 227 56.8
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 1.5e-69 266.9 224 57.6
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 3.3e-69 265.8 237 57.8
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 3.3e-69 265.8 226 60.2
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 3.6e-68 262.3 225 56.9
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 1.4e-67 260.4 252 54.4
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 1.8e-67 260.0 225 56.0
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 1.2e-66 257.3 227 55.1
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 2.0e-66 256.5 228 55.7
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 7.5e-66 254.6 221 57.9
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 3.7e-65 252.3 233 53.2
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 8.3e-65 251.1 229 53.7
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 8.3e-65 251.1 221 56.6
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 1.1e-64 250.8 250 50.8
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 4.1e-64 248.8 232 53.9
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 7.0e-64 248.1 227 52.9
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 9.2e-64 247.7 224 54.9
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 1.2e-63 247.3 226 51.8
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 2.0e-63 246.5 224 52.7
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 3.5e-63 245.7 225 56.9
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 4.6e-63 245.4 227 52.4
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 1.3e-62 243.8 220 58.2
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 1.7e-62 243.4 227 52.4
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 2.3e-62 243.0 225 52.4
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 3.9e-62 242.3 222 52.7
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 3.9e-62 242.3 238 49.2
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 5.0e-62 241.9 225 52.9
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 5.0e-62 241.9 225 52.4
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 6.6e-62 241.5 233 54.1
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 1.5e-61 240.4 231 49.8
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 2.5e-61 239.6 229 52.4
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 2.5e-61 239.6 224 53.1
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 4.3e-61 238.8 219 54.8
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 1.6e-60 236.9 230 53.5
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 2.8e-60 236.1 232 55.2
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 3.6e-60 235.7 219 54.8
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 1.1e-59 234.2 236 50.8
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 1.1e-59 234.2 204 57.4
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 1.4e-59 233.8 230 52.2
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 1.4e-59 233.8 218 53.2
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 8.9e-59 231.1 222 52.7
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 1.2e-58 230.7 220 55.9
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 1.2e-58 230.7 218 52.8
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 2.0e-58 229.9 222 53.2
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 2.0e-58 229.9 219 53.4
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 2.6e-58 229.6 231 48.1
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 3.4e-58 229.2 188 57.4
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 7.5e-58 228.0 219 53.4
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 9.9e-58 227.6 222 53.2
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 9.9e-58 227.6 222 53.6
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 1.3e-57 227.3 228 47.8
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 2.9e-57 226.1 218 51.8
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 3.7e-57 225.7 220 50.5
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 8.3e-57 224.6 222 50.0
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 4.1e-56 222.2 222 51.8
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 9.2e-56 221.1 222 49.5
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 1.2e-55 220.7 168 63.1
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 4.6e-55 218.8 228 47.4
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 6.0e-55 218.4 221 51.6
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 1.1e-53 214.2 228 46.5
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 1.5e-53 213.8 225 46.2
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 2.5e-53 213.0 222 48.6
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 2.5e-53 213.0 220 48.6
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 8.1e-52 208.0 161 65.8
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 8.4e-49 198.0 140 65.7
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 6.0e-47 191.8 224 46.4
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 2.3e-46 189.9 140 64.3
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 3.0e-46 189.5 215 46.5
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 8.1e-44 181.4 222 44.1
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 3.4e-42 176.0 217 43.8
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 9.9e-42 174.5 171 53.2
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 9.9e-42 174.5 259 39.0
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 2.1e-36 156.8 123 58.5
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 7.6e-34 148.3 151 49.7
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 1.3e-33 147.5 168 45.2
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 7.1e-32 141.7 104 65.4
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 1.5e-29 134.0 151 46.4
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 7.4e-29 131.7 269 29.4
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 2.9e-25 119.8 182 36.3
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 2.4e-24 116.7 127 46.5
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 2.1e-23 113.6 190 36.8
Haze_03371 Corylus avellana HOM05D007112 ORTHO05D008930 3.3e-21 106.3 102 54.9
Haze_03374 Corylus avellana HOM05D000072 ORTHO05D000026 2.6e-18 96.7 100 51.0
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 2.9e-17 93.2 84 54.8
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 7.1e-16 88.6 117 35.0
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 9.3e-16 88.2 144 38.2
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 3.5e-15 86.3 62 61.3
TWI18G1453 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 3.5e-15 86.3 96 41.7
Nn7g37443 Nelumbo nucifera HOM05D007112 ORTHO05D008930 1.0e-14 84.7 62 53.2
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 2.3e-14 83.6 156 34.0
C04p34930 Brassica napus HOM05D007112 ORTHO05D008930 1.9e-08 63.9 110 35.5
BolC4t25047H Brassica oleracea HOM05D007112 ORTHO05D027530 1.6e-07 60.8 146 30.1


User provided reference genes

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