Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0331G1663 Vigna mungo HOM05D005569 ORTHO05D007052 2.4e-94 349.0 197 100.0
arahy.Tifrunner.gnm1.ann1.DT0EHL Arachis hypogaea HOM05D005569 ORTHO05D007052 2.5e-67 259.2 170 79.4
arahy.Tifrunner.gnm1.ann1.0XD544 Arachis hypogaea HOM05D005569 ORTHO05D007052 2.1e-66 256.1 170 78.8
Lj3g0021821 Lotus japonicus HOM05D005569 ORTHO05D007052 1.4e-65 253.4 167 80.8
Medtr4g005340 Medicago truncatula HOM05D005569 ORTHO05D007052 5.3e-65 251.5 162 80.9
Ca_20982_v3 Cicer arietinum L. HOM05D005569 ORTHO05D007052 6.9e-65 251.1 175 75.4
Glyma.07G001900 Glycine max HOM05D005569 ORTHO05D007052 1.5e-64 250.0 171 80.1
Psat7g265160 Pisum sativum HOM05D005569 ORTHO05D007052 2.6e-64 249.2 169 78.1
TPR.G38774 Trifolium pratense HOM05D005569 ORTHO05D007052 2.6e-64 249.2 169 77.5
Prupe.3G023400 Prunus persica HOM05D005569 ORTHO05D007052 5.6e-59 231.5 164 72.6
Ciclev10032913m.g Citrus clementina HOM05D005569 ORTHO05D007052 9.6e-59 230.7 158 74.1
RcHm_v2.0_Chr2g0149331 Rosa chinensis HOM05D005569 ORTHO05D007052 9.6e-59 230.7 165 72.1
Aqoxy7G02714 Aquilegia oxysepala HOM05D005569 ORTHO05D007052 2.1e-58 229.6 164 72.6
MD17G1161700 Malus domestica HOM05D005569 ORTHO05D007052 2.8e-58 229.2 156 73.7
MD09G1166000 Malus domestica HOM05D005569 ORTHO05D007052 8.1e-58 227.6 156 73.1
TAR626G0082 Trochodendron aralioides HOM05D005569 ORTHO05D007052 8.1e-58 227.6 160 74.4
FvH4_6g36900 Fragaria vesca HOM05D005569 ORTHO05D007052 1.8e-57 226.5 165 71.5
FAN14G0087 Fragaria x ananassa HOM05D000810 ORTHO05D003737 1.8e-57 226.5 165 71.5
Potri.008G004200 Populus trichocarpa HOM05D005569 ORTHO05D007052 1.8e-57 226.5 165 69.7
COL.COLO4_31145 Corchorus olitorius HOM05D000810 ORTHO05D003737 2.4e-57 226.1 171 69.0
Gohir.A05G114900 Gossypium hirsutum HOM05D005569 ORTHO05D007052 3.1e-57 225.7 167 72.5
Thecc.06G056000 Theobroma cacao HOM05D005569 ORTHO05D007052 5.3e-57 224.9 165 71.5
Sc15g0001130 Simmondsia chinensis HOM05D005569 ORTHO05D007052 6.9e-57 224.6 168 69.6
FAN09G0120 Fragaria x ananassa HOM05D005569 ORTHO05D007052 9.0e-57 224.2 165 70.9
Lalb_Chr01g0011651 Lupinus albus HOM05D005569 ORTHO05D007052 9.0e-57 224.2 176 72.2
Gohir.D05G115300 Gossypium hirsutum HOM05D005569 ORTHO05D007052 2.0e-56 223.0 167 71.9
Gorai.009G119400 Gossypium raimondii HOM05D005569 ORTHO05D007052 2.0e-56 223.0 167 71.9
Phvul.010G164400 Phaseolus vulgaris HOM05D005569 ORTHO05D007052 2.6e-56 222.6 174 69.0
Sed0017383 Sechium edule HOM05D005569 ORTHO05D007052 3.8e-55 218.8 160 66.2
ClCG09G020780 Citrullus lanatus HOM05D005569 ORTHO05D007052 4.9e-55 218.4 160 66.9
Hma1.2p1_1111F.1_g258450 Hydrangea macrophylla HOM05D005569 ORTHO05D007052 6.4e-55 218.0 171 68.4
CsaV3_5G025600 Cucumis sativus L. HOM05D005569 ORTHO05D007052 1.4e-54 216.9 160 65.6
Eucgr.J00350 Eucalyptus grandis HOM05D005569 ORTHO05D007052 1.4e-54 216.9 161 72.7
PSO063G3520 Papaver somniferum HOM05D005569 ORTHO05D007052 1.4e-54 216.9 160 70.0
PSO170G0292 Papaver somniferum HOM05D005569 ORTHO05D007052 1.4e-54 216.9 160 70.0
Nn8g41003 Nelumbo nucifera HOM05D005569 ORTHO05D007052 1.9e-54 216.5 158 70.3
MELO3C002923.2 Cucumis melo HOM05D005569 ORTHO05D007052 3.2e-54 215.7 160 66.2
Cpa.g.sc176.7 Carica papaya HOM05D005569 ORTHO05D007052 7.1e-54 214.5 160 69.4
AUR62025672 Chenopodium quinoa HOM05D005569 ORTHO05D007052 7.1e-54 214.5 168 64.9
TWI75G0478 Tripterygium wilfordii HOM05D005569 ORTHO05D007052 7.1e-54 214.5 168 66.7
CSS0046788 Camellia sinensis var. sinensis HOM05D005569 ORTHO05D007052 9.3e-54 214.2 159 69.2
Manes.06G179601 Manihot esculenta HOM05D005569 ORTHO05D007052 9.3e-54 214.2 158 69.6
Hund05672 Selenicereus undatus HOM05D005569 ORTHO05D007052 1.6e-53 213.4 169 66.3
Lsat_1_v5_gn_5_137201 Lactuca sativa HOM05D005569 ORTHO05D007052 2.1e-53 213.0 161 68.9
GSVIVG01029554001 Vitis vinifera HOM05D005569 ORTHO05D007052 4.6e-53 211.8 153 70.6
vmacro12582 Vaccinium macrocarpon HOM05D005569 ORTHO05D007052 6.0e-53 211.5 171 64.9
QL05p088862 Quercus lobata HOM05D005569 ORTHO05D007052 7.9e-53 211.1 152 71.1
FAN05G2575 Fragaria x ananassa HOM05D005569 ORTHO05D007052 2.3e-52 209.5 194 60.3
HanXRQChr12g0359721 Helianthus annuus HOM05D005569 ORTHO05D007052 2.3e-52 209.5 169 64.5
Actinidia00647 Actinidia chinensis HOM05D005569 ORTHO05D007052 3.0e-52 209.1 159 68.6
Lj6P639T26 Lonicera japonica HOM05D005569 ORTHO05D007052 3.9e-52 208.8 153 71.9
CAN.G1445.2 Capsicum annuum HOM05D005569 ORTHO05D007052 5.1e-52 208.4 156 67.9
PGSC0003DMG400001840 Solanum tuberosum HOM05D005569 ORTHO05D007052 5.1e-52 208.4 156 68.6
HanXRQChr10g0311221 Helianthus annuus HOM05D005569 ORTHO05D007052 6.7e-52 208.0 158 68.4
Nitab4.5_0001708g0020 Nicotiana tabacum HOM05D005569 ORTHO05D007052 1.1e-51 207.2 139 74.8
Sopen08g026060 Solanum pennellii HOM05D005569 ORTHO05D007052 1.1e-51 207.2 141 75.2
Solyc08g077470.4 Solanum lycopersicum HOM05D005569 ORTHO05D007052 2.5e-51 206.1 141 74.5
AL2G39310 Arabidopsis lyrata HOM05D005569 ORTHO05D007052 3.3e-51 205.7 139 75.5
Nitab4.5_0007226g0010 Nicotiana tabacum HOM05D005569 ORTHO05D007052 3.3e-51 205.7 147 71.4
THA.LOC104808103 Tarenaya hassleriana HOM05D005569 ORTHO05D007052 4.3e-51 205.3 156 69.9
AT1G78895 Arabidopsis thaliana HOM05D005569 ORTHO05D007052 5.6e-51 204.9 139 76.3
CiPaw.02G129100 Carya illinoinensis HOM05D005569 ORTHO05D007052 5.6e-51 204.9 160 66.9
Nitab4.5_0002354g0080 Nicotiana tabacum HOM05D005569 ORTHO05D007052 7.4e-51 204.5 152 67.1
ECA234G1813 Erigeron canadensis HOM05D005569 ORTHO05D007052 2.1e-50 203.0 160 66.9
BcaB02g07184 Brassica carinata HOM05D005569 ORTHO05D007052 4.8e-50 201.8 140 74.3
CARHR072480 Cardamine hirsuta HOM05D005569 ORTHO05D007052 4.8e-50 201.8 157 68.8
Sp5g33910 Schrenkiella parvula HOM05D005569 ORTHO05D007052 4.8e-50 201.8 158 68.4
CiPaw.01G208600 Carya illinoinensis HOM05D005569 ORTHO05D007052 1.8e-49 199.9 149 69.8
CDE04G0659 Ceratophyllum demersum HOM05D005569 ORTHO05D007052 1.8e-49 199.9 154 66.2
CDE07G0675 Ceratophyllum demersum HOM05D005569 ORTHO05D007052 1.8e-49 199.9 154 68.2
PGSC0003DMG400026509 Solanum tuberosum HOM05D005569 ORTHO05D007052 3.1e-49 199.1 156 63.5
Carub.0002s2572 Capsella rubella HOM05D005569 ORTHO05D007052 4.0e-49 198.7 158 68.4
Sp1g14960 Schrenkiella parvula HOM05D005569 ORTHO05D007052 4.0e-49 198.7 159 67.3
CAN.G308.17 Capsicum annuum HOM05D005569 ORTHO05D007052 5.3e-49 198.4 152 64.5
Thhalv10019242m.g Eutrema salsugineum HOM05D005569 ORTHO05D007052 6.9e-49 198.0 137 74.5
BcaC07g41383 Brassica carinata HOM05D005569 ORTHO05D007052 1.2e-48 197.2 156 68.6
PGR031G1139 Punica granatum HOM05D005569 ORTHO05D007052 2.0e-48 196.4 195 57.9
Aa31LG4G2110 Aethionema arabicum HOM05D005569 ORTHO05D007052 4.5e-48 195.3 143 72.7
Sopen06g022820 Solanum pennellii HOM05D005569 ORTHO05D007052 7.6e-48 194.5 157 61.1
SGA_v2.0_scaffold4G02105 Striga asiatica HOM05D005569 ORTHO05D007052 1.7e-47 193.4 156 66.0
BcaC07g41456 Brassica carinata HOM05D005569 ORTHO05D007052 2.9e-47 192.6 159 67.3
BolC8t51973H Brassica oleracea HOM05D005569 ORTHO05D007052 2.9e-47 192.6 159 67.3
MSTRG.9559 Avicennia marina HOM05D005569 ORTHO05D007052 3.8e-47 192.2 156 65.4
HPP92_023863 Vanilla planifolia HOM05D005569 ORTHO05D007052 4.9e-47 191.8 135 73.3
BraA07t30385Z Brassica rapa HOM05D005569 ORTHO05D007052 8.4e-47 191.0 158 66.5
FAN02G3798 Fragaria x ananassa HOM05D005569 ORTHO05D007052 8.4e-47 191.0 138 72.5
BraA09t41445Z Brassica rapa HOM05D005569 ORTHO05D007052 1.1e-46 190.7 159 66.7
Migut.D00888 Erythranthe guttata HOM05D005569 ORTHO05D007052 1.1e-46 190.7 156 64.1
CARHR017290 Cardamine hirsuta HOM05D005569 ORTHO05D007052 2.5e-46 189.5 159 64.2
A07p27440 Brassica napus HOM05D005569 ORTHO05D007052 3.2e-46 189.1 144 70.8
BcaC08g45404 Brassica carinata HOM05D005569 ORTHO05D007052 7.1e-46 188.0 144 70.1
C06p30360 Brassica napus HOM05D005569 ORTHO05D007052 7.1e-46 188.0 144 70.1
Carub.0001s1656 Capsella rubella HOM05D005569 ORTHO05D007052 9.3e-46 187.6 136 73.5
AL1G28990 Arabidopsis lyrata HOM05D005569 ORTHO05D007052 1.2e-45 187.2 136 73.5
BolC6t38199H Brassica oleracea HOM05D005569 ORTHO05D007052 2.7e-45 186.0 144 69.4
EL10Ac7g18137 Beta vulgaris HOM05D005569 ORTHO05D007052 4.6e-45 185.3 126 76.2
Actinidia31124 Actinidia chinensis HOM05D005569 ORTHO05D007052 6.0e-45 184.9 152 64.5
MSTRG.4523 Avicennia marina HOM05D005569 ORTHO05D007052 6.0e-45 184.9 150 65.3
AT1G16825 Arabidopsis thaliana HOM05D005569 ORTHO05D007052 7.9e-45 184.5 136 72.1
Nitab4.5_0003757g0060 Nicotiana tabacum HOM05D005569 ORTHO05D007052 3.0e-44 182.6 131 70.2
Oeu049628.2 Olea europaea HOM05D005569 ORTHO05D007052 3.9e-44 182.2 123 75.6
Hund18590 Selenicereus undatus HOM05D005569 ORTHO05D007052 1.5e-43 180.3 146 66.4
Zm00001eb414080 Zea mays HOM05D005569 ORTHO05D007052 1.9e-43 179.9 160 58.8
Peaxi162Scf00084g00024 Petunia axillaris HOM05D005569 ORTHO05D007052 1.1e-41 174.1 129 69.0
C08p44280 Brassica napus HOM05D005569 ORTHO05D007052 3.1e-41 172.6 126 74.6
SalBow4G0561 Salvia bowleyana HOM05D005569 ORTHO05D007052 6.9e-41 171.4 172 56.4
A09p60680 Brassica napus HOM05D005569 ORTHO05D007052 1.2e-40 170.6 126 73.8
DCAR_028944 Daucus carota HOM05D005569 ORTHO05D007052 1.5e-40 170.2 107 82.2
Haze_16187 Corylus avellana HOM05D005569 ORTHO05D007052 2.0e-40 169.9 112 76.8
SEGI_33936 Sequoiadendron giganteum HOM05D005569 ORTHO05D007052 1.0e-39 167.5 129 66.7
Sabra08G0001800 Salix brachista HOM05D005569 ORTHO05D007052 2.5e-38 162.9 105 82.9
MBI16_g18210_MAGBIO Magnolia biondii HOM05D005569 ORTHO05D007052 3.2e-38 162.5 99 81.8
CANSAT01G2461 Cannabis sativa HOM05D005569 ORTHO05D007052 1.3e-36 157.1 100 80.0
AUR62001332 Chenopodium quinoa HOM05D005569 ORTHO05D007052 1.3e-36 157.1 105 77.1
Thhalv10009539m.g Eutrema salsugineum HOM05D005569 ORTHO05D007052 1.3e-34 150.6 99 79.8
Os08g0225100 Oryza sativa ssp. japonica HOM05D005569 ORTHO05D007052 2.2e-34 149.8 127 60.6
SEGI_27689 Sequoiadendron giganteum HOM05D005569 ORTHO05D007052 2.2e-34 149.8 119 63.0
Pp3c8_16360 Physcomitrium patens HOM05D005569 ORTHO05D007052 1.4e-30 137.1 123 59.3
SMO215G0002 Selaginella moellendorffii HOM05D005569 ORTHO05D007052 1.9e-30 136.7 117 62.4
Cc04_g00060 Coffea canephora HOM05D005569 ORTHO05D007052 7.2e-30 134.8 110 62.7
Mapoly0045s0143 Marchantia polymorpha HOM05D005569 ORTHO05D007052 4.6e-29 132.1 131 51.1
ATR0626G016 Amborella trichopoda HOM05D005569 ORTHO05D007052 1.4e-28 130.6 105 60.0
Duzib192G1047 Durio zibethinus HOM05D005569 ORTHO05D007052 4.3e-27 125.6 85 74.1
Atru.chr1.2818 Acer truncatum HOM05D005569 ORTHO05D007052 1.3e-26 124.0 77 81.8
Prupe.3G058300 Prunus persica HOM05D005569 ORTHO05D007052 1.7e-23 113.6 96 63.5
Pp3c24_12140 Physcomitrium patens HOM05D005569 ORTHO05D007052 2.0e-19 100.1 118 55.1
CBR_g49429 Chara braunii HOM05D005569 ORTHO05D007052 2.6e-16 89.7 129 39.5
BcaC07g41384 Brassica carinata HOM05D005569 ORTHO05D007052 3.5e-16 89.4 116 46.6
CBR_g40779 Chara braunii HOM05D005569 ORTHO05D007052 1.0e-15 87.8 129 41.1
unitig_899.g14763 Utricularia gibba HOM05D000070 ORTHO05D003301 1.5e-14 84.0 55 72.7
CBR_g41646 Chara braunii HOM05D000785 ORTHO05D000231 5.5e-14 82.0 122 38.5
Duzib235G0081 Durio zibethinus HOM05D005569 ORTHO05D007052 5.5e-14 82.0 58 72.4
HPP92_023858 Vanilla planifolia HOM05D005569 ORTHO05D007052 8.8e-12 74.7 47 78.7
SEGI_34083 Sequoiadendron giganteum HOM05D000074 ORTHO05D000220 1.1e-09 67.8 49 69.4
C08p44240 Brassica napus HOM05D005569 ORTHO05D007052 1.2e-08 64.3 52 71.2
BolC8t51970H Brassica oleracea HOM05D005569 ORTHO05D007052 1.2e-08 64.3 52 71.2
BolC8t51972H Brassica oleracea HOM05D005569 ORTHO05D000015 1.5e-06 57.4 35 85.7
Glyma.08G224900 Glycine max HOM05D005569 ORTHO05D007052 3.2e-06 56.2 30 76.7
C08p44260 Brassica napus HOM05D005569 ORTHO05D007052 5.5e-06 55.5 32 90.6


User provided reference genes

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