Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0331G1566 Vigna mungo HOM05D006066 ORTHO05D007720 6.5e-111 404.1 201 100.0
Phvul.010G014500 Phaseolus vulgaris HOM05D006066 ORTHO05D007720 5.5e-78 294.7 180 84.4
Glyma.19G124200 Glycine max HOM05D006066 ORTHO05D007720 9.4e-70 267.3 181 75.1
Lj3g0025737 Lotus japonicus HOM05D006066 ORTHO05D007720 2.3e-52 209.5 180 59.4
arahy.Tifrunner.gnm1.ann1.50JBL9 Arachis hypogaea HOM05D006066 ORTHO05D007720 1.9e-46 189.9 183 56.8
arahy.Tifrunner.gnm1.ann1.9R7KTD Arachis hypogaea HOM05D006066 ORTHO05D007720 1.1e-44 184.1 183 55.2
Lalb_Chr07g0194051 Lupinus albus HOM05D006066 ORTHO05D007720 1.9e-41 173.3 189 51.9
Psat2g159600 Pisum sativum HOM05D006066 ORTHO05D007720 2.4e-41 172.9 185 53.0
Medtr4g022660 Medicago truncatula HOM05D006066 ORTHO05D007720 2.0e-35 153.3 186 50.0
Medtr7g026915 Medicago truncatula HOM05D006066 ORTHO05D007720 4.6e-32 142.1 119 59.7
TPR.G5589 Trifolium pratense HOM05D006066 ORTHO05D007720 4.0e-28 129.0 121 56.2
MD10G1165500 Malus domestica HOM05D006066 ORTHO05D007720 6.2e-21 105.1 189 36.5
RcHm_v2.0_Chr6g0284991 Rosa chinensis HOM05D006066 ORTHO05D007720 1.1e-20 104.4 189 34.9
Thecc.01G227100 Theobroma cacao HOM05D006066 ORTHO05D007720 3.4e-19 99.4 189 34.4
FAN15G1679 Fragaria x ananassa HOM05D006066 ORTHO05D007720 4.4e-19 99.0 189 36.5
Nn1g07817 Nelumbo nucifera HOM05D006066 ORTHO05D007720 5.8e-19 98.6 194 32.5
Gohir.D11G143350 Gossypium hirsutum HOM05D006066 ORTHO05D007720 9.9e-19 97.8 191 33.5
FvH4_2g19201 Fragaria vesca HOM05D006066 ORTHO05D007720 1.7e-18 97.1 189 36.5
FAN24G1416 Fragaria x ananassa HOM05D006066 ORTHO05D000168 2.2e-18 96.7 198 35.4
Duzib133G0184 Durio zibethinus HOM05D006066 ORTHO05D007720 3.8e-18 95.9 186 35.5
FAN27G1043 Fragaria x ananassa HOM05D006066 ORTHO05D007720 8.4e-18 94.7 205 35.6
TWI36G0510 Tripterygium wilfordii HOM05D006066 ORTHO05D007720 1.4e-17 94.0 192 33.9
Hund18348 Selenicereus undatus HOM05D006066 ORTHO05D007720 4.2e-17 92.4 191 31.9
Sc24g0003620 Simmondsia chinensis HOM05D006066 ORTHO05D007720 4.2e-17 92.4 190 33.7
CiPaw.01G110500 Carya illinoinensis HOM05D006066 ORTHO05D007720 5.4e-17 92.0 183 35.0
AUR62031844 Chenopodium quinoa HOM05D006066 ORTHO05D007720 1.6e-16 90.5 193 31.6
Prupe.8G204000 Prunus persica HOM05D006066 ORTHO05D007720 1.6e-16 90.5 128 39.8
Atru.chr11.2652 Acer truncatum HOM05D006066 ORTHO05D007720 2.7e-16 89.7 184 34.2
QL06p028120 Quercus lobata HOM05D006066 ORTHO05D007720 3.5e-16 89.4 121 43.8
Manes.11G092400 Manihot esculenta HOM05D006066 ORTHO05D007720 4.6e-16 89.0 192 33.9
Cfa008679 Carpinus fangiana HOM05D006066 ORTHO05D007720 1.7e-15 87.0 168 33.9
EL10Ac7g17774 Beta vulgaris HOM05D006066 ORTHO05D007720 1.1e-14 84.3 191 30.9
CANSAT01G1110 Cannabis sativa HOM05D006066 ORTHO05D007720 1.5e-14 84.0 193 33.2
Actinidia09488 Actinidia chinensis HOM05D006066 ORTHO05D007720 1.9e-14 83.6 189 28.6
DCAR_018556 Daucus carota HOM05D006066 ORTHO05D007720 1.9e-14 83.6 125 37.6
CsaV3_3G029870 Cucumis sativus L. HOM05D006066 ORTHO05D007720 2.5e-14 83.2 124 37.1
Gohir.A11G137000 Gossypium hirsutum HOM05D006066 ORTHO05D007720 4.3e-14 82.4 174 31.6
HanXRQChr04g0110731 Helianthus annuus HOM05D006066 ORTHO05D007720 5.6e-14 82.0 125 39.2
ECA236G0120 Erigeron canadensis HOM05D006066 ORTHO05D007720 7.3e-14 81.6 128 37.5
Solyc09g061380.3 Solanum lycopersicum HOM05D006066 ORTHO05D007720 7.3e-14 81.6 195 32.8
Sopen09g024200 Solanum pennellii HOM05D006066 ORTHO05D007720 7.3e-14 81.6 195 32.8
PGR119G0212 Punica granatum HOM05D006066 ORTHO05D007720 1.3e-13 80.9 185 30.8
BcaC05g29758 Brassica carinata HOM05D006066 ORTHO05D007720 1.6e-13 80.5 108 38.9
A05p41140 Brassica napus HOM05D006066 ORTHO05D007720 1.6e-13 80.5 108 39.8
AUR62008867 Chenopodium quinoa HOM05D006066 ORTHO05D007720 1.6e-13 80.5 131 35.9
Glyma.16G068300 Glycine max HOM05D006066 ORTHO05D007720 1.6e-13 80.5 53 79.2
THA.LOC104818950 Tarenaya hassleriana HOM05D006066 ORTHO05D007720 1.6e-13 80.5 187 27.8
MELO3C026986.2 Cucumis melo HOM05D006066 ORTHO05D007720 2.1e-13 80.1 128 37.5
Lsat_1_v5_gn_8_90041 Lactuca sativa HOM05D006066 ORTHO05D007720 2.1e-13 80.1 124 37.1
PSO782G0283 Papaver somniferum HOM05D006066 ORTHO05D007720 3.6e-13 79.3 198 27.8
C05p60330 Brassica napus HOM05D006066 ORTHO05D007720 6.2e-13 78.6 108 38.0
BolC5t34680H Brassica oleracea HOM05D006066 ORTHO05D007720 8.1e-13 78.2 108 38.0
BcaC05g29836 Brassica carinata HOM05D006066 ORTHO05D000168 1.1e-12 77.8 108 38.0
Eucgr.K03610 Eucalyptus grandis HOM05D006066 ORTHO05D007720 1.1e-12 77.8 203 29.6
AT3G07060 Arabidopsis thaliana HOM05D006066 ORTHO05D007720 1.4e-12 77.4 111 39.6
COL.COLO4_07189 Corchorus olitorius HOM05D006066 ORTHO05D007720 1.4e-12 77.4 136 30.9
Actinidia23727 Actinidia chinensis HOM05D006066 ORTHO05D007720 2.4e-12 76.6 129 31.8
Aqoxy5G00070 Aquilegia oxysepala HOM05D006066 ORTHO05D007720 2.4e-12 76.6 127 32.3
AL3G18290 Arabidopsis lyrata HOM05D006066 ORTHO05D007720 2.4e-12 76.6 179 31.8
Sp3g06000 Schrenkiella parvula HOM05D006066 ORTHO05D007720 2.4e-12 76.6 176 30.1
CARHR081640 Cardamine hirsuta HOM05D006066 ORTHO05D007720 3.1e-12 76.3 175 32.6
PSO170G1150 Papaver somniferum HOM05D006066 ORTHO05D007720 3.1e-12 76.3 133 32.3
Sed0017682 Sechium edule HOM05D006066 ORTHO05D007720 3.1e-12 76.3 127 34.6
Rhsim01G0256300 Rhododendron simsii HOM05D006066 ORTHO05D007720 4.0e-12 75.9 128 30.5
Carub.0003s0657 Capsella rubella HOM05D006066 ORTHO05D007720 6.9e-12 75.1 176 32.4
CSS0038727 Camellia sinensis var. sinensis HOM05D006066 ORTHO05D007720 9.0e-12 74.7 194 29.4
Cpa.g.sc8.165 Carica papaya HOM05D006066 ORTHO05D007720 9.0e-12 74.7 150 30.7
Thhalv10020116m.g Eutrema salsugineum HOM05D006066 ORTHO05D007720 9.0e-12 74.7 175 30.3
CSS0045030 Camellia sinensis var. sinensis HOM05D006066 ORTHO05D007720 1.5e-11 73.9 128 31.2
BraA05t22840Z Brassica rapa HOM05D006066 ORTHO05D000168 2.0e-11 73.6 112 34.8
Nitab4.5_0000045g0020 Nicotiana tabacum HOM05D006066 ORTHO05D007720 3.4e-11 72.8 192 32.3
Aqoxy2G03103 Aquilegia oxysepala HOM05D006066 ORTHO05D007720 7.6e-11 71.6 129 31.8
ClCG07G001890 Citrullus lanatus HOM05D006066 ORTHO05D007720 7.6e-11 71.6 186 30.6
SEGI_19430 Sequoiadendron giganteum HOM05D006066 ORTHO05D007720 9.9e-11 71.2 190 27.4
vmacro14760 Vaccinium macrocarpon HOM05D006066 ORTHO05D007720 2.2e-10 70.1 128 29.7
CAN.G154.6 Capsicum annuum HOM05D006066 ORTHO05D007720 4.9e-10 68.9 188 32.4
Aa31LG5G17620 Aethionema arabicum HOM05D006066 ORTHO05D007720 6.4e-10 68.6 109 34.9
MSTRG.21425 Avicennia marina HOM05D006066 ORTHO05D007720 6.4e-10 68.6 168 29.8
TAR393G0002 Trochodendron aralioides HOM05D006066 ORTHO05D007720 1.1e-09 67.8 97 36.1
Gorai.007G153600 Gossypium raimondii HOM05D006066 ORTHO05D007720 1.9e-09 67.0 106 34.0
Migut.D00528 Erythranthe guttata HOM05D006066 ORTHO05D007720 5.4e-09 65.5 123 30.1
BcaB05g23643 Brassica carinata HOM05D006066 ORTHO05D007720 9.3e-09 64.7 107 34.6
BcaC03g16146 Brassica carinata HOM05D006066 ORTHO05D007720 9.3e-09 64.7 107 34.6
Lj2A644T10 Lonicera japonica HOM05D006066 ORTHO05D007720 3.5e-08 62.8 99 34.3
Ciclev10024634m.g Citrus clementina HOM05D006066 ORTHO05D007720 2.5e-06 56.6 149 32.9


User provided reference genes

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