Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0331G1514 Vigna mungo HOM05D001329 ORTHO05D004946 0.0e+00 1090.5 562 100.0
Phvul.010G143800 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 6.7e-299 1030.0 562 93.6
Glyma.08G199700 Glycine max HOM05D001329 ORTHO05D004946 8.3e-273 943.3 565 87.1
Psat4g196800 Pisum sativum HOM05D001329 ORTHO05D004946 1.3e-241 839.7 563 78.0
Medtr8g014670 Medicago truncatula HOM05D001329 ORTHO05D004946 1.7e-241 839.3 565 77.3
arahy.Tifrunner.gnm1.ann1.KL0FMA Arachis hypogaea HOM05D001329 ORTHO05D002618 1.1e-232 810.1 553 76.1
Ca_23279_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 2.4e-232 808.9 568 76.1
Lalb_Chr04g0263001 Lupinus albus HOM05D001329 ORTHO05D004946 3.2e-232 808.5 571 73.4
TPR.G15143 Trifolium pratense HOM05D001329 ORTHO05D004946 1.6e-228 796.2 554 75.8
arahy.Tifrunner.gnm1.ann1.B6KHKZ Arachis hypogaea HOM05D001329 ORTHO05D002618 5.6e-221 771.2 516 77.7
Lj3g0020598 Lotus japonicus HOM05D001329 ORTHO05D004946 1.4e-200 703.4 400 90.2
GSVIVG01016954001 Vitis vinifera HOM05D001329 ORTHO05D004946 1.4e-200 703.4 484 73.6
Eucgr.J02692 Eucalyptus grandis HOM05D001329 ORTHO05D004946 7.1e-200 701.0 486 72.0
Potri.001G191200 Populus trichocarpa HOM05D001329 ORTHO05D004946 6.1e-199 698.0 521 69.5
Eucgr.J02926 Eucalyptus grandis HOM05D001329 ORTHO05D004946 1.0e-198 697.2 519 68.6
TAR626G1508 Trochodendron aralioides HOM05D001329 ORTHO05D004946 8.2e-196 687.6 483 72.0
TAR626G1659 Trochodendron aralioides HOM05D001329 ORTHO05D004946 8.2e-196 687.6 483 72.0
Manes.11G031600 Manihot esculenta HOM05D001329 ORTHO05D004946 1.1e-195 687.2 485 70.9
Ciclev10025165m.g Citrus clementina HOM05D001329 ORTHO05D004946 4.1e-195 685.3 523 68.6
Lalb_Chr24g0396201 Lupinus albus HOM05D001329 ORTHO05D004946 9.0e-195 684.1 487 72.1
Nn8g39015 Nelumbo nucifera HOM05D001329 ORTHO05D004946 2.6e-194 682.6 482 70.7
QL05p019057 Quercus lobata HOM05D001329 ORTHO05D004946 4.5e-194 681.8 484 71.3
TWI18G0587 Tripterygium wilfordii HOM05D001329 ORTHO05D004946 1.3e-193 680.2 487 70.8
Duzib235G0146 Durio zibethinus HOM05D001329 ORTHO05D004946 3.8e-193 678.7 523 67.5
PGR102G1644 Punica granatum HOM05D001329 ORTHO05D004946 5.0e-193 678.3 525 67.0
Thecc.06G102200 Theobroma cacao HOM05D001329 ORTHO05D004946 1.2e-191 673.7 492 70.3
TPR.G6578 Trifolium pratense HOM05D001329 ORTHO05D004946 2.7e-191 672.5 489 69.9
ClCG07G013420 Citrullus lanatus HOM05D001329 ORTHO05D004946 7.9e-191 671.0 486 69.5
ClCG07G013460 Citrullus lanatus HOM05D001329 ORTHO05D004946 1.8e-190 669.8 486 69.5
Cc04_g02430 Coffea canephora HOM05D001329 ORTHO05D004946 1.8e-190 669.8 486 68.9
MD17G1180500 Malus domestica HOM05D001329 ORTHO05D004946 3.0e-190 669.1 483 71.6
Lsat_1_v5_gn_4_98041 Lactuca sativa HOM05D001329 ORTHO05D004946 8.8e-190 667.5 516 67.8
Lj3g0004043 Lotus japonicus HOM05D001329 ORTHO05D004946 3.3e-189 665.6 484 70.0
THA.LOC104803142 Tarenaya hassleriana HOM05D001329 ORTHO05D004946 1.7e-188 663.3 540 65.0
Ah.01g017270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 1.4e-187 660.2 487 69.0
Aqoxy7G03959 Aquilegia oxysepala HOM05D001329 ORTHO05D004946 1.4e-187 660.2 483 69.2
Sed0006591 Sechium edule HOM05D001329 ORTHO05D004946 1.4e-187 660.2 505 67.1
HanXRQChr05g0139791 Helianthus annuus HOM05D001329 ORTHO05D004946 2.4e-187 659.4 514 66.0
Nitab4.5_0004969g0080 Nicotiana tabacum HOM05D001329 ORTHO05D004946 2.4e-187 659.4 488 69.3
Peaxi162Scf00038g01146 Petunia axillaris HOM05D001329 ORTHO05D004946 6.9e-187 657.9 483 69.6
CANSAT56G2668 Cannabis sativa HOM05D001329 ORTHO05D004946 9.1e-187 657.5 488 68.6
Glyma.15G021000 Glycine max HOM05D001329 ORTHO05D004946 1.2e-186 657.1 558 62.9
Gorai.011G070300 Gossypium raimondii HOM05D001329 ORTHO05D004946 1.2e-186 657.1 484 68.8
arahy.Tifrunner.gnm1.ann1.V5Z0HR Arachis hypogaea HOM05D001329 ORTHO05D004946 2.0e-186 656.4 519 65.1
Medtr2g100640 Medicago truncatula HOM05D001329 ORTHO05D004946 5.9e-186 654.8 557 63.6
VMungo1080G1498 Vigna mungo HOM05D001329 ORTHO05D004946 5.9e-186 654.8 485 68.0
Sopen03g039950 Solanum pennellii HOM05D001329 ORTHO05D004946 7.7e-186 654.4 476 70.2
Phvul.005G165000 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 1.7e-185 653.3 559 61.7
Solyc03g121120.4 Solanum lycopersicum HOM05D001329 ORTHO05D004946 2.2e-185 652.9 476 70.0
CAN.G1143.24 Capsicum annuum HOM05D001329 ORTHO05D004946 5.0e-185 651.7 473 70.0
Nitab4.5_0005085g0040 Nicotiana tabacum HOM05D001329 ORTHO05D004946 5.0e-185 651.7 488 68.6
CiPaw.01G230000 Carya illinoinensis HOM05D001329 ORTHO05D004946 1.1e-184 650.6 482 70.7
PGSC0003DMG400002521 Solanum tuberosum HOM05D001329 ORTHO05D004946 1.4e-184 650.2 550 63.1
Aa31LG3G5830 Aethionema arabicum HOM05D001329 ORTHO05D004946 2.5e-184 649.4 486 68.5
MBI02_g35318_MAGBIO Magnolia biondii HOM05D001329 ORTHO05D004946 2.7e-183 646.0 482 68.9
EL10Ac9g21183 Beta vulgaris HOM05D001329 ORTHO05D004946 7.4e-181 637.9 482 67.6
BcaC01g04813 Brassica carinata HOM05D001329 ORTHO05D004946 1.3e-180 637.1 563 60.0
Migut.I00963 Erythranthe guttata HOM05D001329 ORTHO05D004946 1.3e-180 637.1 500 66.2
Sp6g12440 Schrenkiella parvula HOM05D001329 ORTHO05D004946 1.3e-180 637.1 538 61.9
Sc12g0010100 Simmondsia chinensis HOM05D001329 ORTHO05D004946 1.3e-180 637.1 482 66.2
A03p27790 Brassica napus HOM05D001329 ORTHO05D004946 2.2e-180 636.3 542 61.4
FvH4_6g32620 Fragaria vesca HOM05D001329 ORTHO05D004946 2.8e-180 636.0 516 66.7
BolC3t15673H Brassica oleracea HOM05D001329 ORTHO05D004946 4.8e-180 635.2 541 61.6
C03p33520 Brassica napus HOM05D001329 ORTHO05D004946 1.1e-179 634.0 541 61.6
COL.COLO4_30535 Corchorus olitorius HOM05D001329 ORTHO05D004946 1.8e-179 633.3 484 68.2
BraA03t11990Z Brassica rapa HOM05D001329 ORTHO05D004946 5.3e-179 631.7 566 59.5
Thhalv10013055m.g Eutrema salsugineum HOM05D001329 ORTHO05D004946 5.3e-179 631.7 557 60.5
Rhsim08G0228700 Rhododendron simsii HOM05D001329 ORTHO05D004946 1.2e-178 630.6 572 60.3
Carub.0008s1040 Capsella rubella HOM05D001329 ORTHO05D004946 2.0e-178 629.8 555 60.7
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 3.5e-178 629.0 515 64.1
vmacro18841 Vaccinium macrocarpon HOM05D001329 ORTHO05D004946 4.5e-178 628.6 519 64.7
PSO782G0993 Papaver somniferum HOM05D001329 ORTHO05D004946 1.7e-177 626.7 487 66.3
AT5G50340 Arabidopsis thaliana HOM05D001329 ORTHO05D004946 2.2e-177 626.3 491 64.6
CsaV3_3G023430 Cucumis sativus L. HOM05D001329 ORTHO05D004946 2.2e-177 626.3 482 66.4
RcHm_v2.0_Chr2g0141101 Rosa chinensis HOM05D001329 ORTHO05D004946 5.0e-177 625.2 542 63.7
Gohir.A10G064700 Gossypium hirsutum HOM05D001329 ORTHO05D004946 5.5e-176 621.7 484 66.7
MELO3C013011.2 Cucumis melo HOM05D001329 ORTHO05D004946 9.4e-176 620.9 482 66.6
AL8G24420 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 3.6e-175 619.0 556 60.1
Os06g0151600 Oryza sativa ssp. japonica HOM05D001329 ORTHO05D004946 3.6e-175 619.0 483 65.0
PSO478G0947 Papaver somniferum HOM05D001329 ORTHO05D004946 4.7e-175 618.6 539 61.4
Sabra01G0150400 Salix brachista HOM05D001329 ORTHO05D004946 1.0e-174 617.5 583 58.0
AUR62031953 Chenopodium quinoa HOM05D001329 ORTHO05D004946 2.8e-172 609.4 567 58.2
Prupe.3G056500 Prunus persica HOM05D001329 ORTHO05D004946 1.2e-170 604.0 431 72.4
Dinv30424 Davidia involucrata HOM05D001329 ORTHO05D004946 1.6e-170 603.6 464 68.3
Ca_01173_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 4.5e-170 602.1 527 62.2
BcaB01g02899 Brassica carinata HOM05D001329 ORTHO05D004946 7.7e-170 601.3 483 64.0
ATR0705G162 Amborella trichopoda HOM05D001329 ORTHO05D004946 5.0e-169 598.6 516 60.1
unitig_88.g27600 Utricularia gibba HOM05D001329 ORTHO05D004946 4.2e-168 595.5 501 60.7
GSVIVG01016953001 Vitis vinifera HOM05D001329 ORTHO05D004946 1.4e-166 590.5 537 60.5
Hund07630 Selenicereus undatus HOM05D001329 ORTHO05D004946 2.3e-166 589.7 484 62.8
FAN05G0851 Fragaria x ananassa HOM05D001329 ORTHO05D004946 9.1e-163 577.8 518 62.7
SalBow2G1072 Salvia bowleyana HOM05D001329 ORTHO05D004946 1.6e-159 567.0 489 62.2
DCAR_007591 Daucus carota HOM05D001329 ORTHO05D004946 2.6e-157 559.7 461 63.8
SGA_v2.0_scaffold45G16999 Striga asiatica HOM05D001329 ORTHO05D004946 2.1e-151 540.0 481 60.9
SGA_v2.0_scaffold265G46056 Striga asiatica HOM05D001329 ORTHO05D004946 2.2e-148 530.0 502 57.8
Psat5g295200 Pisum sativum HOM05D001329 ORTHO05D004946 1.8e-147 526.9 495 60.2
Gohir.D10G066200 Gossypium hirsutum HOM05D001329 ORTHO05D004946 1.5e-144 517.3 391 69.6
Lj9C514G19 Lonicera japonica HOM05D001329 ORTHO05D004946 1.2e-138 497.7 423 65.0
Mapoly0008s0091 Marchantia polymorpha HOM05D001329 ORTHO05D004946 2.0e-138 496.9 503 52.3
AUR62022239 Chenopodium quinoa HOM05D001329 ORTHO05D004946 6.0e-138 495.4 529 51.8
FAN14G3013 Fragaria x ananassa HOM05D001329 ORTHO05D004946 6.0e-138 495.4 519 56.8
SEGI_18109 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 3.0e-137 493.0 386 65.3
VMungo1080G0220 Vigna mungo HOM05D001329 ORTHO05D004946 4.4e-133 479.2 379 63.3
Pp3c1_36770 Physcomitrium patens HOM05D001329 ORTHO05D004946 1.7e-129 467.2 578 46.9
Zm00001eb270700 Zea mays HOM05D001329 ORTHO05D004946 2.6e-125 453.4 393 60.8
SMO146G0024 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.7e-121 440.7 484 48.8
Atru.chr1.3485 Acer truncatum HOM05D001329 ORTHO05D004946 1.9e-120 437.2 306 72.5
Actinidia32112 Actinidia chinensis HOM05D001329 ORTHO05D004946 9.6e-120 434.9 287 76.7
CBR_g52747 Chara braunii HOM05D001329 ORTHO05D004946 4.8e-111 406.0 545 44.6
arahy.Tifrunner.gnm1.ann1.VU8J7C Arachis hypogaea HOM05D001329 ORTHO05D004946 6.2e-111 405.6 494 48.6
AUR62022260 Chenopodium quinoa HOM05D001329 ORTHO05D004946 6.4e-108 395.6 346 60.7
MCO02G474 Micromonas commoda HOM05D001329 ORTHO05D004946 7.6e-101 372.1 490 43.5
Psat5g239480 Pisum sativum HOM05D001329 ORTHO05D004946 1.8e-97 360.9 325 63.4
AagrBONN_evm.TU.Sc2ySwM_340.358 Anthoceros agrestis HOM05D001329 ORTHO05D004946 9.6e-96 355.1 355 53.0
Ah.16g103270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 3.8e-92 343.2 266 66.5
CSS0049032 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 4.2e-91 339.7 281 66.2
PRCOL_00001245 Prasinoderma coloniale HOM05D001329 ORTHO05D004946 6.0e-90 335.9 558 37.5
CDE02G2442 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 3.9e-89 333.2 268 61.9
CSS0007570 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 1.3e-87 328.2 311 57.2
Cpa.g.sc25.37 Carica papaya HOM05D001329 ORTHO05D004946 9.0e-78 295.4 196 76.5
CARHR258160 Cardamine hirsuta HOM05D001329 ORTHO05D004946 1.7e-76 291.2 300 54.0
HPP92_003950 Vanilla planifolia HOM05D001329 ORTHO05D004946 1.7e-76 291.2 258 60.1
Haze_15874 Corylus avellana HOM05D001329 ORTHO05D004946 2.9e-76 290.4 300 54.3
Haze_15870 Corylus avellana HOM05D001329 ORTHO05D004946 1.1e-75 288.5 287 55.7
CSS0047870 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 6.1e-74 282.7 289 54.0
SHI11143 Sapria himalayana HOM05D000023 ORTHO05D000014 4.5e-69 266.5 293 51.2
CANSAT56G4024 Cannabis sativa HOM05D001329 ORTHO05D004946 2.5e-67 260.8 192 71.4
AL58U10020 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 3.7e-63 246.9 191 63.9
Cre07.g317908 Chlamydomonas reinhardtii HOM05D001329 ORTHO05D004946 1.2e-61 241.9 534 32.0
RcHm_v2.0_Chr2g0141091 Rosa chinensis HOM05D001329 ORTHO05D004946 3.8e-60 236.9 273 53.5
CDE02G0018 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 5.0e-60 236.5 178 66.9
Actinidia21724 Actinidia chinensis HOM05D001329 ORTHO05D004946 3.6e-58 230.3 251 52.6
CANSAT56G3773 Cannabis sativa HOM05D001329 ORTHO05D004946 1.4e-54 218.4 155 75.5
SMO173G0075 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 5.3e-54 216.5 391 37.1
SMO173G0029 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.5e-51 208.4 371 38.0
SMO173G0086 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 5.5e-51 206.5 253 47.0
Haze_15873 Corylus avellana HOM05D001329 ORTHO05D004946 3.5e-45 187.2 157 68.2
Lsat_1_v5_gn_1_63401 Lactuca sativa HOM05D001329 ORTHO05D004946 6.5e-44 183.0 147 67.3
Oeu063750.1 Olea europaea HOM05D001329 ORTHO05D004946 2.0e-40 171.4 108 75.9
Lsat_1_v5_gn_9_94461 Lactuca sativa HOM05D001329 ORTHO05D004946 1.3e-39 168.7 126 69.0
SMO173G0090 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 5.0e-36 156.8 239 40.2
SMO146G0193 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.5e-35 155.2 255 39.2
Glyma.13G353300 Glycine max HOM05D001329 ORTHO05D004946 1.2e-34 152.1 119 63.9
Psat5g295400 Pisum sativum HOM05D001329 ORTHO05D004946 1.8e-33 148.3 129 53.5
Haze_15869 Corylus avellana HOM05D001329 ORTHO05D004946 5.2e-33 146.7 150 58.7
SEGI_08653 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 9.8e-32 142.5 168 45.2
PSO675G5297 Papaver somniferum HOM05D001329 ORTHO05D004946 1.1e-22 112.5 253 33.2
Hma1.2p1_0430F.1_g151230 Hydrangea macrophylla HOM05D001329 ORTHO05D004946 1.0e-20 105.9 163 38.7
Cpa.g.sc25.35 Carica papaya HOM05D001329 ORTHO05D004946 3.0e-20 104.4 133 41.4
arahy.Tifrunner.gnm1.ann1.3W2ZUL Arachis hypogaea HOM05D001329 ORTHO05D010271 1.5e-19 102.1 73 68.5
SHI11148 Sapria himalayana HOM05D000105 ORTHO05D000023 3.3e-19 100.9 73 63.0
Gohir.A05G129875 Gossypium hirsutum HOM05D001329 ORTHO05D004946 6.2e-18 96.7 69 63.8
PGR102G0501 Punica granatum HOM05D001329 ORTHO05D004946 9.8e-16 89.4 141 39.0
Cpa.g.sc2949.1 Carica papaya HOM05D001329 ORTHO05D004946 1.7e-15 88.6 52 86.5
Eucgr.G00548 Eucalyptus grandis HOM05D001329 ORTHO05D004946 1.7e-15 88.6 59 69.5
Cfa015409 Carpinus fangiana HOM05D007753 ORTHO05D009385 1.1e-14 85.9 61 63.9
Glyma.08G248800 Glycine max HOM05D001329 ORTHO05D004946 2.1e-13 81.6 48 89.6
arahy.Tifrunner.gnm1.ann1.H8VH8W Arachis hypogaea HOM05D008137 ORTHO05D010271 8.6e-12 76.3 50 72.0
SMO173G0016 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 8.6e-12 76.3 70 48.6
arahy.Tifrunner.gnm1.ann1.R9IHKK Arachis hypogaea HOM05D001329 ORTHO05D010271 1.1e-11 75.9 51 72.5
Cpa.g.c44864 Carica papaya HOM05D001329 ORTHO05D004946 1.5e-11 75.5 53 66.0
SalBow8G0867 Salvia bowleyana HOM05D001329 ORTHO05D004946 2.5e-11 74.7 83 49.4
SMO173G0061 Selaginella moellendorffii HOM05D001549 ORTHO05D003098 2.5e-11 74.7 49 67.3
RcHm_v2.0_Chr2g0141071 Rosa chinensis HOM05D001329 ORTHO05D004946 2.1e-10 71.6 51 66.7
arahy.Tifrunner.gnm1.ann1.6Z8QT9 Arachis hypogaea HOM05D001329 ORTHO05D010271 4.7e-10 70.5 51 64.7
SHI11147 Sapria himalayana HOM05D000105 ORTHO05D000023 6.2e-10 70.1 86 46.5
BcaC02g08434 Brassica carinata HOM05D001329 ORTHO05D004946 1.2e-08 65.9 57 50.9
BcaB01g06145 Brassica carinata HOM05D001329 ORTHO05D004946 2.6e-08 64.7 50 54.0
arahy.Tifrunner.gnm1.ann1.9Y3J9M Arachis hypogaea HOM05D008137 ORTHO05D010271 9.9e-08 62.8 50 64.0
arahy.Tifrunner.gnm1.ann1.B8XGRJ Arachis hypogaea HOM05D008137 ORTHO05D010271 9.9e-08 62.8 50 64.0
arahy.Tifrunner.gnm1.ann1.VBV8TV Arachis hypogaea HOM05D008137 ORTHO05D010271 9.9e-08 62.8 50 64.0
arahy.Tifrunner.gnm1.ann1.YK1T90 Arachis hypogaea HOM05D008137 ORTHO05D010271 9.9e-08 62.8 50 64.0
arahy.Tifrunner.gnm1.ann1.4Z5MNN Arachis hypogaea HOM05D001329 ORTHO05D004946 1.3e-07 62.4 138 36.2
C04p54240 Brassica napus HOM05D001329 ORTHO05D004946 2.2e-07 61.6 135 31.1
Oeu043914.1 Olea europaea HOM05D001329 ORTHO05D004946 3.8e-07 60.8 54 51.9
CsaV3_5G013640 Cucumis sativus L. HOM05D001329 ORTHO05D004946 2.4e-06 58.2 43 51.2


User provided reference genes

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