Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 3.6e-99 365.2 215 100.0
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 7.0e-87 324.3 212 93.9
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 7.7e-86 320.9 216 89.4
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 5.2e-82 308.1 217 88.0
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 1.7e-80 303.1 216 79.6
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 3.8e-77 292.0 217 75.1
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 6.5e-77 291.2 217 74.7
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 1.2e-75 287.0 216 81.5
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 4.8e-72 275.0 224 80.8
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 5.9e-70 268.1 216 68.5
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 1.5e-52 210.3 213 62.4
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 6.2e-51 204.9 221 61.1
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 8.0e-51 204.5 176 62.5
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 1.0e-50 204.1 207 59.9
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 1.4e-50 203.8 214 58.4
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 1.4e-50 203.8 159 67.3
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 1.8e-50 203.4 177 63.3
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 2.6e-49 199.5 206 59.2
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 1.3e-48 197.2 170 67.1
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 1.4e-47 193.7 154 74.0
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 1.4e-47 193.7 174 63.8
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.9e-47 193.4 160 66.9
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 1.9e-47 193.4 164 64.6
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 2.4e-47 193.0 222 58.6
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 5.4e-47 191.8 219 59.8
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 7.0e-47 191.4 219 53.9
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 7.0e-47 191.4 219 53.9
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 1.2e-46 190.7 182 59.3
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 1.2e-46 190.7 221 57.5
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 2.0e-46 189.9 214 60.7
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 2.7e-46 189.5 165 80.0
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 3.5e-46 189.1 172 58.7
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 4.6e-46 188.7 220 62.3
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 6.0e-46 188.3 158 72.8
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 7.8e-46 188.0 170 61.8
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 1.0e-45 187.6 163 69.9
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 1.0e-45 187.6 228 55.3
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 1.3e-45 187.2 217 57.1
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 1.7e-45 186.8 211 56.4
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 2.3e-45 186.4 161 60.9
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 3.9e-45 185.7 172 58.7
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 3.9e-45 185.7 174 69.5
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 3.9e-45 185.7 110 80.0
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 3.9e-45 185.7 194 59.8
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 5.0e-45 185.3 219 59.4
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 6.6e-45 184.9 218 52.8
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 6.6e-45 184.9 190 67.4
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 8.6e-45 184.5 161 63.4
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 1.1e-44 184.1 208 53.4
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 1.1e-44 184.1 194 54.1
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.5e-44 183.7 160 72.5
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 1.5e-44 183.7 238 52.1
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 1.9e-44 183.3 220 58.6
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 1.9e-44 183.3 194 55.2
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.5e-44 183.0 209 53.1
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 2.5e-44 183.0 172 57.0
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 3.3e-44 182.6 181 55.8
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 5.6e-44 181.8 179 57.0
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 5.6e-44 181.8 210 59.5
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 5.6e-44 181.8 155 74.2
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 7.3e-44 181.4 159 59.1
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 1.2e-43 180.6 217 59.4
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 1.2e-43 180.6 158 69.6
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 1.6e-43 180.3 194 53.1
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 1.6e-43 180.3 162 58.0
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 2.1e-43 179.9 162 66.7
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 3.6e-43 179.1 228 52.6
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 3.6e-43 179.1 112 74.1
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 4.7e-43 178.7 205 54.1
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 1.1e-42 177.6 196 53.6
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 1.8e-42 176.8 197 58.4
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 1.8e-42 176.8 212 57.5
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 3.1e-42 176.0 162 58.6
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 5.2e-42 175.3 209 52.2
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 6.8e-42 174.9 210 50.5
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 2.0e-41 173.3 154 60.4
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 3.4e-41 172.6 205 52.2
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 3.4e-41 172.6 111 73.0
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 7.5e-41 171.4 202 55.9
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 7.5e-41 171.4 187 54.0
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 1.3e-40 170.6 213 49.8
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 1.3e-40 170.6 171 63.7
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 3.7e-40 169.1 200 57.0
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 3.7e-40 169.1 179 53.1
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 1.1e-39 167.5 217 54.8
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 1.4e-39 167.2 190 51.6
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 1.4e-39 167.2 185 54.1
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 1.4e-39 167.2 181 55.2
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 1.4e-39 167.2 185 54.1
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 1.4e-39 167.2 181 55.2
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 1.9e-39 166.8 109 72.5
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 3.2e-39 166.0 200 56.0
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 3.2e-39 166.0 185 51.4
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 4.1e-39 165.6 197 53.3
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 7.1e-39 164.9 220 49.5
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 2.1e-38 163.3 219 55.3
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 4.6e-38 162.2 112 68.8
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 1.0e-37 161.0 171 58.5
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 8.6e-37 157.9 168 48.8
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 2.5e-36 156.4 109 67.9
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 3.6e-35 152.5 106 70.8
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 3.6e-35 152.5 183 53.6
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 4.0e-34 149.1 106 63.2
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 4.0e-34 149.1 150 60.0
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 4.4e-33 145.6 237 43.9
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 9.9e-33 144.4 223 45.7
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 1.1e-31 141.0 112 62.5
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 4.1e-31 139.0 210 51.0
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 1.0e-29 134.4 111 61.3
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 2.4e-26 123.2 108 52.8
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 7.8e-22 108.2 101 50.5
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 1.0e-21 107.8 108 49.1
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 1.7e-21 107.1 106 49.1
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 3.3e-12 76.3 72 51.4
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 2.4e-10 70.1 145 52.4
Ca_23582_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 1.9e-07 60.5 39 74.4
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 9.3e-07 58.2 144 37.5
THA.LOC104815380 Tarenaya hassleriana HOM05D006993 ORTHO05D008336 3.5e-06 56.2 155 42.6


User provided reference genes

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