Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0331G1471 Vigna mungo HOM05D000045 ORTHO05D001346 3.8e-79 298.1 151 100.0
VMungo1309G2873 Vigna mungo HOM05D000045 ORTHO05D001346 6.4e-55 217.6 117 93.2
Phvul.009G253800 Phaseolus vulgaris HOM05D000045 ORTHO05D001346 3.0e-44 182.2 100 90.0
Glyma.09G039300 Glycine max HOM05D000045 ORTHO05D001346 5.7e-43 177.9 100 89.0
arahy.Tifrunner.gnm1.ann1.BDP107 Arachis hypogaea HOM05D000045 ORTHO05D001346 1.6e-42 176.4 100 89.0
arahy.Tifrunner.gnm1.ann1.DC1LDI Arachis hypogaea HOM05D000045 ORTHO05D001346 1.6e-42 176.4 100 89.0
Ca_01880_v3 Cicer arietinum L. HOM05D000045 ORTHO05D001346 1.6e-42 176.4 100 87.0
Ca_01894_v3 Cicer arietinum L. HOM05D000045 ORTHO05D001346 1.6e-42 176.4 100 87.0
TPR.G27713 Trifolium pratense HOM05D000045 ORTHO05D001346 1.6e-42 176.4 100 87.0
Glyma.15G144500 Glycine max HOM05D000045 ORTHO05D001346 2.8e-42 175.6 100 88.0
Psat1g158280 Pisum sativum HOM05D000045 ORTHO05D001346 3.7e-42 175.3 100 86.0
QL06p011313 Quercus lobata HOM05D000045 ORTHO05D001346 3.7e-42 175.3 100 86.0
GSVIVG01035045001 Vitis vinifera HOM05D000045 ORTHO05D001346 4.8e-42 174.9 101 83.2
VMungo1383G0831 Vigna mungo HOM05D000045 ORTHO05D001346 1.1e-41 173.7 100 87.0
TWI53G0848 Tripterygium wilfordii HOM05D000045 ORTHO05D001346 2.4e-41 172.6 100 84.0
Lalb_Chr20g0121001 Lupinus albus HOM05D000045 ORTHO05D001346 9.0e-41 170.6 100 85.0
CiPaw.01G142200 Carya illinoinensis HOM05D000045 ORTHO05D001346 1.2e-40 170.2 100 83.0
Haze_01087 Corylus avellana HOM05D000045 ORTHO05D001346 3.4e-40 168.7 100 83.0
MBI18_g24953_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D001346 3.4e-40 168.7 106 76.4
Thecc.04G294900 Theobroma cacao HOM05D000045 ORTHO05D001346 3.4e-40 168.7 100 83.0
COL.COLO4_34673 Corchorus olitorius HOM05D000045 ORTHO05D001346 5.9e-40 167.9 100 82.0
Duzib151G0801 Durio zibethinus HOM05D000045 ORTHO05D001346 1.3e-39 166.8 100 81.0
CANSAT78G1905 Cannabis sativa HOM05D000045 ORTHO05D001346 2.2e-39 166.0 100 82.0
Lj6g0006221 Lotus japonicus HOM05D000045 ORTHO05D001346 2.2e-39 166.0 100 83.0
Gorai.011G195800 Gossypium raimondii HOM05D000045 ORTHO05D001346 2.9e-39 165.6 100 81.0
PSO210G2335 Papaver somniferum HOM05D000045 ORTHO05D001346 2.9e-39 165.6 100 80.0
Gohir.D10G175000 Gossypium hirsutum HOM05D000045 ORTHO05D001346 3.8e-39 165.2 100 81.0
Rhsim13G0006600 Rhododendron simsii HOM05D000045 ORTHO05D001346 8.5e-39 164.1 100 81.0
CSS0044022 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D001346 1.4e-38 163.3 100 80.0
PSO761G0468 Papaver somniferum HOM05D000045 ORTHO05D001346 2.5e-38 162.5 100 79.0
MBI19_g29993_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D001346 3.2e-38 162.2 106 73.6
THA.LOC104802700 Tarenaya hassleriana HOM05D000045 ORTHO05D001346 3.2e-38 162.2 100 77.0
Dinv33097 Davidia involucrata HOM05D000045 ORTHO05D001346 5.5e-38 161.4 100 79.0
MD13G1158700 Malus domestica HOM05D000045 ORTHO05D001346 9.3e-38 160.6 100 81.0
Prupe.1G125700 Prunus persica HOM05D000045 ORTHO05D001346 9.3e-38 160.6 100 81.0
CAN.G668.26 Capsicum annuum HOM05D000045 ORTHO05D001346 1.2e-37 160.2 100 77.0
Potri.008G108800 Populus trichocarpa HOM05D000045 ORTHO05D001346 1.2e-37 160.2 100 78.0
Potri.T171101 Populus trichocarpa HOM05D000045 ORTHO05D001346 1.2e-37 160.2 100 78.0
EL10Ac3g04925 Beta vulgaris HOM05D000045 ORTHO05D001346 2.7e-37 159.1 101 78.2
Ciclev10004395m.g Citrus clementina HOM05D000045 ORTHO05D001346 2.7e-37 159.1 100 80.0
HanXRQChr13g0393041 Helianthus annuus HOM05D000045 ORTHO05D001346 2.7e-37 159.1 95 81.1
Lj1C20T10 Lonicera japonica HOM05D000045 ORTHO05D001346 2.7e-37 159.1 103 74.8
Sabra02G0158800 Salix brachista HOM05D000045 ORTHO05D001346 7.9e-37 157.5 100 76.0
Aqoxy3G00858 Aquilegia oxysepala HOM05D000045 ORTHO05D001346 1.0e-36 157.1 104 77.9
Nitab4.5_0000116g0130 Nicotiana tabacum HOM05D000045 ORTHO05D001346 1.0e-36 157.1 100 77.0
Eucgr.K03522 Eucalyptus grandis HOM05D000045 ORTHO05D001346 1.3e-36 156.8 100 77.0
Potri.002G199300 Populus trichocarpa HOM05D000045 ORTHO05D001346 1.8e-36 156.4 100 76.0
Sopen09g030440 Solanum pennellii HOM05D000045 ORTHO05D001346 2.3e-36 156.0 100 74.0
Peaxi162Scf00001g00283 Petunia axillaris HOM05D000045 ORTHO05D001346 3.0e-36 155.6 100 74.0
PGR044G0187 Punica granatum HOM05D000045 ORTHO05D001346 3.0e-36 155.6 100 76.0
AUR62016149 Chenopodium quinoa HOM05D000045 ORTHO05D001346 3.9e-36 155.2 100 76.0
Nitab4.5_0004002g0040 Nicotiana tabacum HOM05D000045 ORTHO05D001346 3.9e-36 155.2 100 75.0
Atru.chr4.2954 Acer truncatum HOM05D000045 ORTHO05D001346 1.9e-35 152.9 100 78.0
Ah.13g072100 Amaranthus hybridus HOM05D000045 ORTHO05D001346 2.5e-35 152.5 100 76.0
AUR62035065 Chenopodium quinoa HOM05D000045 ORTHO05D001346 5.7e-35 151.4 100 75.0
Hund11952 Selenicereus undatus HOM05D000045 ORTHO05D001346 5.7e-35 151.4 100 75.0
MSTRG.17391 Avicennia marina HOM05D000045 ORTHO05D001346 1.6e-34 149.8 100 75.0
ECA233G5486 Erigeron canadensis HOM05D000045 ORTHO05D001346 6.3e-34 147.9 91 76.9
PSO170G2300 Papaver somniferum HOM05D000045 ORTHO05D001346 1.8e-33 146.4 103 74.8
CDE09G0309 Ceratophyllum demersum HOM05D000045 ORTHO05D001346 2.4e-33 146.0 101 70.3
RcHm_v2.0_Chr4g0424281 Rosa chinensis HOM05D000045 ORTHO05D001346 3.1e-33 145.6 84 82.1
Cpa.g.sc151.57 Carica papaya HOM05D000045 ORTHO05D001346 5.3e-33 144.8 91 75.8
Manes.01G225200 Manihot esculenta HOM05D000045 ORTHO05D001346 6.9e-33 144.4 85 80.0
FvH4_4g19281 Fragaria vesca HOM05D000045 ORTHO05D001346 2.0e-32 142.9 100 71.0
CDE11G0520 Ceratophyllum demersum HOM05D000045 ORTHO05D001346 7.7e-32 141.0 101 68.3
Dinv10063 Davidia involucrata HOM05D000045 ORTHO05D001346 3.2e-30 135.6 70 90.0
VMungo1080G0343 Vigna mungo HOM05D001715 ORTHO05D003849 1.7e-26 123.2 115 60.0
AUR62042947 Chenopodium quinoa HOM05D000045 ORTHO05D001346 3.4e-24 115.5 100 63.0
MBI06_g32163_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D001346 1.5e-19 100.1 99 52.5
Atru.chr6.353 Acer truncatum HOM05D000045 ORTHO05D001346 3.3e-19 99.0 90 53.3
Nn4g24595 Nelumbo nucifera HOM05D000045 ORTHO05D001346 5.7e-19 98.2 99 51.5
Dinv29667 Davidia involucrata HOM05D000045 ORTHO05D001346 9.7e-19 97.4 90 51.1
CiPaw.06G176100 Carya illinoinensis HOM05D000045 ORTHO05D001346 1.3e-18 97.1 90 51.1
FvH4_5g27741 Fragaria vesca HOM05D000045 ORTHO05D001346 1.3e-18 97.1 90 50.0
Glyma.10G001400 Glycine max HOM05D000045 ORTHO05D001346 1.3e-18 97.1 90 51.1
RcHm_v2.0_Chr7g0219621 Rosa chinensis HOM05D000045 ORTHO05D001346 1.3e-18 97.1 99 49.5
VMungo0540G0739 Vigna mungo HOM05D000045 ORTHO05D001346 1.3e-18 97.1 90 51.1
CANSAT01G0267 Cannabis sativa HOM05D000045 ORTHO05D001346 2.2e-18 96.3 90 52.2
Gorai.006G118900 Gossypium raimondii HOM05D000045 ORTHO05D001346 2.8e-18 95.9 99 50.5
Peaxi162Scf00011g01634 Petunia axillaris HOM05D000045 ORTHO05D001346 2.8e-18 95.9 79 57.0
Prupe.1G583000 Prunus persica HOM05D000045 ORTHO05D001346 2.8e-18 95.9 99 50.5
Thecc.09G264500 Theobroma cacao HOM05D000045 ORTHO05D001346 2.8e-18 95.9 90 51.1
Haze_10008 Corylus avellana HOM05D000045 ORTHO05D001346 3.7e-18 95.5 90 51.1
Manes.10G110600 Manihot esculenta HOM05D000045 ORTHO05D001346 3.7e-18 95.5 90 50.0
Gohir.D09G101500 Gossypium hirsutum HOM05D000045 ORTHO05D001346 4.8e-18 95.1 99 50.5
Phvul.006G220900 Phaseolus vulgaris HOM05D000045 ORTHO05D001346 4.8e-18 95.1 90 50.0
QL02p102405 Quercus lobata HOM05D000045 ORTHO05D001346 4.8e-18 95.1 90 50.0
QL02p103043 Quercus lobata HOM05D000045 ORTHO05D001346 4.8e-18 95.1 90 50.0
COL.COLO4_25306 Corchorus olitorius HOM05D000045 ORTHO05D001346 6.3e-18 94.7 90 50.0
MELO3C033452.2 Cucumis melo HOM05D000045 ORTHO05D001346 6.3e-18 94.7 104 50.0
CsaV3_5G014020 Cucumis sativus L. HOM05D000045 ORTHO05D001346 6.3e-18 94.7 104 50.0
CsaV3_UNG168310 Cucumis sativus L. HOM05D000045 ORTHO05D001346 6.3e-18 94.7 104 50.0
MELO3C032543.2 Cucumis melo HOM05D000045 ORTHO05D001346 8.2e-18 94.4 104 50.0
Rhsim11G0118700 Rhododendron simsii HOM05D000045 ORTHO05D001346 8.2e-18 94.4 79 58.2
arahy.Tifrunner.gnm1.ann1.RBX3HB Arachis hypogaea HOM05D000045 ORTHO05D001346 1.1e-17 94.0 99 49.5
arahy.Tifrunner.gnm1.ann1.Z2KB3N Arachis hypogaea HOM05D000045 ORTHO05D001346 1.1e-17 94.0 99 49.5
MSTRG.16475 Avicennia marina HOM05D000045 ORTHO05D001346 1.1e-17 94.0 90 51.1
AUR62017439 Chenopodium quinoa HOM05D000045 ORTHO05D001346 1.1e-17 94.0 90 50.0
Ciclev10000456m.g Citrus clementina HOM05D000045 ORTHO05D001346 1.1e-17 94.0 90 50.0
Sabra01G0172600 Salix brachista HOM05D000045 ORTHO05D001346 1.1e-17 94.0 90 50.0
AL1G20950 Arabidopsis lyrata HOM05D000045 ORTHO05D001346 1.4e-17 93.6 90 48.9
CARHR010360 Cardamine hirsuta HOM05D000045 ORTHO05D001346 1.8e-17 93.2 90 48.9
Eucgr.G00085 Eucalyptus grandis HOM05D000045 ORTHO05D001346 1.8e-17 93.2 90 51.1
MD09G1270100 Malus domestica HOM05D000045 ORTHO05D001346 1.8e-17 93.2 90 50.0
PSO170G0044 Papaver somniferum HOM05D000045 ORTHO05D001346 1.8e-17 93.2 87 51.7
Potri.004G227600 Populus trichocarpa HOM05D000045 ORTHO05D001346 1.8e-17 93.2 90 50.0
vmacro01687 Vaccinium macrocarpon HOM05D000045 ORTHO05D001346 1.8e-17 93.2 99 52.5
Duzib170G0238 Durio zibethinus HOM05D000045 ORTHO05D001346 2.4e-17 92.8 90 50.0
Gohir.A09G104800 Gossypium hirsutum HOM05D000045 ORTHO05D001346 2.4e-17 92.8 99 48.5
HanXRQChr10g0294671 Helianthus annuus HOM05D000045 ORTHO05D001346 2.4e-17 92.8 90 48.9
Lj5A281T52 Lonicera japonica HOM05D000045 ORTHO05D001346 2.4e-17 92.8 99 49.5
Nitab4.5_0001057g0060 Nicotiana tabacum HOM05D000045 ORTHO05D001346 2.4e-17 92.8 99 51.5
Nitab4.5_0001129g0080 Nicotiana tabacum HOM05D000045 ORTHO05D001346 2.4e-17 92.8 99 51.5
A06p06890 Brassica napus HOM05D000045 ORTHO05D001346 4.1e-17 92.0 100 46.0
C05p08370 Brassica napus HOM05D000045 ORTHO05D001346 4.1e-17 92.0 100 46.0
AUR62032468 Chenopodium quinoa HOM05D000045 ORTHO05D001346 4.1e-17 92.0 90 50.0
CDE02G1527 Ceratophyllum demersum HOM05D000045 ORTHO05D001346 5.3e-17 91.7 78 56.4
PSO017G3610 Papaver somniferum HOM05D000045 ORTHO05D001346 5.3e-17 91.7 87 51.7
Sed0027343 Sechium edule HOM05D000045 ORTHO05D001346 5.3e-17 91.7 99 49.5
THA.LOC104816753 Tarenaya hassleriana HOM05D000045 ORTHO05D001346 5.3e-17 91.7 79 55.7
BolC5t29588H Brassica oleracea HOM05D000045 ORTHO05D001346 7.0e-17 91.3 90 47.8
BraA06t23904Z Brassica rapa HOM05D000045 ORTHO05D001346 7.0e-17 91.3 90 47.8
Carub.0001s0965 Capsella rubella HOM05D000045 ORTHO05D001346 7.0e-17 91.3 90 48.9
ECA234G0373 Erigeron canadensis HOM05D000045 ORTHO05D001346 7.0e-17 91.3 99 47.5
Thhalv10006984m.g Eutrema salsugineum HOM05D000045 ORTHO05D001346 7.0e-17 91.3 90 47.8
Aa31LG1G4680 Aethionema arabicum HOM05D000045 ORTHO05D001346 9.1e-17 90.9 90 48.9
ClCG11G000450 Citrullus lanatus HOM05D000045 ORTHO05D001346 9.1e-17 90.9 99 48.5
Lj6g0000593 Lotus japonicus HOM05D000045 ORTHO05D001346 9.1e-17 90.9 90 48.9
Lalb_Chr15g0090851 Lupinus albus HOM05D000045 ORTHO05D001346 9.1e-17 90.9 76 55.3
Sp1g08850 Schrenkiella parvula HOM05D000045 ORTHO05D001346 9.1e-17 90.9 90 47.8
Solyc01g103180.4 Solanum lycopersicum HOM05D000045 ORTHO05D001346 1.2e-16 90.5 79 55.7
Sopen01g045590 Solanum pennellii HOM05D000045 ORTHO05D001346 1.2e-16 90.5 79 55.7
CAN.G855.37 Capsicum annuum HOM05D000045 ORTHO05D001346 1.6e-16 90.1 79 55.7
AT1G10240 Arabidopsis thaliana HOM05D000045 ORTHO05D001346 2.0e-16 89.7 90 46.7
TWI59G0416 Tripterygium wilfordii HOM05D000045 ORTHO05D001346 2.0e-16 89.7 70 60.0
Hund15409 Selenicereus undatus HOM05D000045 ORTHO05D001346 4.5e-16 88.6 128 39.1
Cpa.g.sc113.2 Carica papaya HOM05D000045 ORTHO05D001346 7.7e-16 87.8 90 45.6
TPR.G2092 Trifolium pratense HOM05D000045 ORTHO05D001346 7.7e-16 87.8 75 57.3
Ah.02g128360 Amaranthus hybridus HOM05D000045 ORTHO05D001346 1.0e-15 87.4 102 47.1
EL10Ac6g14028 Beta vulgaris HOM05D000045 ORTHO05D001346 1.3e-15 87.0 62 62.9
Psat1g223880 Pisum sativum HOM05D000045 ORTHO05D001346 1.3e-15 87.0 90 47.8
Ca_00024_v3 Cicer arietinum L. HOM05D000045 ORTHO05D001346 1.7e-15 86.7 90 47.8
Migut.B00731 Erythranthe guttata HOM05D000045 ORTHO05D001346 2.9e-15 85.9 99 47.5
TWI73G0746 Tripterygium wilfordii HOM05D000045 ORTHO05D001346 6.5e-15 84.7 70 57.1
PGR042G0951 Punica granatum HOM05D000045 ORTHO05D001346 1.1e-14 84.0 100 44.0
Os04g0443000 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D001346 3.2e-14 82.4 56 62.5
MBI17_g43197_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D001346 7.5e-11 71.2 61 49.2
Ah.02g117190 Amaranthus hybridus HOM05D029157 ORTHO05D026464 1.8e-09 66.6 84 44.0
AUR62043574 Chenopodium quinoa HOM05D000045 ORTHO05D001346 1.0e-07 60.8 31 83.9
ATR1125G030 Amborella trichopoda HOM05D000045 ORTHO05D001346 2.2e-07 59.7 91 38.5
EL10Ac3g05951 Beta vulgaris HOM05D000045 ORTHO05D001346 2.2e-07 59.7 74 45.9
HPP92_005170 Vanilla planifolia HOM05D000045 ORTHO05D001346 1.1e-06 57.4 67 41.8
EL10Ac9g22684 Beta vulgaris HOM05D000045 ORTHO05D001346 1.5e-06 57.0 80 36.2
AUR62029102 Chenopodium quinoa HOM05D000045 ORTHO05D001346 1.5e-06 57.0 80 37.5
Dinv26611 Davidia involucrata HOM05D000045 ORTHO05D001346 1.5e-06 57.0 68 38.2
Peaxi162Scf00802g00233 Petunia axillaris HOM05D000045 ORTHO05D001346 1.5e-06 57.0 69 39.1
EL10Ac1g01665 Beta vulgaris HOM05D000045 ORTHO05D001346 2.5e-06 56.2 82 35.4
AUR62002424 Chenopodium quinoa HOM05D000045 ORTHO05D001346 2.5e-06 56.2 80 36.2
Lj1C796G8 Lonicera japonica HOM05D000045 ORTHO05D001346 2.5e-06 56.2 68 38.2
MBI14_g07720_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D001346 2.5e-06 56.2 52 57.7
Manes.13G062100 Manihot esculenta HOM05D000045 ORTHO05D001346 2.5e-06 56.2 69 36.2
Lsat_1_v5_gn_7_97020 Lactuca sativa HOM05D000045 ORTHO05D001346 3.2e-06 55.8 64 37.5
Solyc07g045520.4 Solanum lycopersicum HOM05D000045 ORTHO05D001346 3.2e-06 55.8 71 38.0
ClCG02G002840 Citrullus lanatus HOM05D000045 ORTHO05D001346 5.5e-06 55.1 69 40.6
Rhsim06G0176200 Rhododendron simsii HOM05D000045 ORTHO05D001346 5.5e-06 55.1 68 39.7
Sabra14G0127000 Salix brachista HOM05D000045 ORTHO05D001346 5.5e-06 55.1 70 40.0
vmacro12086 Vaccinium macrocarpon HOM05D000045 ORTHO05D001346 5.5e-06 55.1 68 39.7
Aqoxy5G02070 Aquilegia oxysepala HOM05D000045 ORTHO05D001346 7.2e-06 54.7 59 52.5
Sc21g0000620 Simmondsia chinensis HOM05D000045 ORTHO05D001346 7.2e-06 54.7 73 35.6
MELO3C028685.2 Cucumis melo HOM05D000045 ORTHO05D001346 9.4e-06 54.3 85 35.3
Eucgr.H00883 Eucalyptus grandis HOM05D000045 ORTHO05D001346 9.4e-06 54.3 69 37.7
Nitab4.5_0001867g0050 Nicotiana tabacum HOM05D000045 ORTHO05D001346 9.4e-06 54.3 71 36.6
PGR083G0689 Punica granatum HOM05D000045 ORTHO05D001346 9.4e-06 54.3 75 37.3
TPR.G34977 Trifolium pratense HOM05D000045 ORTHO05D016003 9.4e-06 54.3 55 43.6


User provided reference genes

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