Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0331G1214 Vigna mungo HOM05D005866 ORTHO05D007078 4.3e-109 398.3 242 100.0
Phvul.010G008600 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 6.8e-91 337.8 244 86.1
Lj3g0009346 Lotus japonicus HOM05D005866 ORTHO05D007078 1.2e-63 247.3 243 57.6
Glyma.03G077300 Glycine max HOM05D005866 ORTHO05D007078 6.5e-57 224.9 250 68.0
Psat7g247600 Pisum sativum HOM05D005866 ORTHO05D007078 1.3e-54 217.2 253 53.4
Medtr4g015010 Medicago truncatula HOM05D005866 ORTHO05D007078 3.9e-54 215.7 259 60.2
Lalb_Chr07g0193301 Lupinus albus HOM05D005866 ORTHO05D007078 1.3e-52 210.7 219 55.3
TPR.G1580 Trifolium pratense HOM05D005866 ORTHO05D007078 3.1e-51 206.1 242 53.3
TPR.G5230 Trifolium pratense HOM05D005866 ORTHO05D007078 5.3e-51 205.3 260 59.2
Dinv14530 Davidia involucrata HOM05D005866 ORTHO05D007078 6.9e-51 204.9 211 65.9
Glyma.07G145800 Glycine max HOM05D005866 ORTHO05D007078 1.5e-50 203.8 244 51.2
arahy.Tifrunner.gnm1.ann1.T33YJ3 Arachis hypogaea HOM05D005866 ORTHO05D007078 2.0e-50 203.4 260 49.6
Dinv35509 Davidia involucrata HOM05D005866 ORTHO05D007078 2.6e-50 203.0 211 65.4
arahy.Tifrunner.gnm1.ann1.F83RTD Arachis hypogaea HOM05D005866 ORTHO05D007078 3.4e-50 202.6 260 49.6
Glyma.18G197300 Glycine max HOM05D005866 ORTHO05D007078 3.4e-50 202.6 245 51.4
Lj1g0011685 Lotus japonicus HOM05D005866 ORTHO05D007078 5.0e-49 198.7 245 49.8
VMungo1383G0141 Vigna mungo HOM05D005866 ORTHO05D007078 6.5e-49 198.4 244 51.2
Sabra06G0074300 Salix brachista HOM05D005866 ORTHO05D007078 8.5e-49 198.0 225 61.8
Medtr7g067000 Medicago truncatula HOM05D005866 ORTHO05D007078 2.7e-47 193.0 242 50.4
Psat3g131120 Pisum sativum HOM05D005866 ORTHO05D007078 2.7e-47 193.0 237 51.1
Ca_07614_v3 Cicer arietinum L. HOM05D005866 ORTHO05D007078 6.1e-47 191.8 221 52.5
CiPaw.09G206400 Carya illinoinensis HOM05D005866 ORTHO05D007078 1.0e-46 191.0 240 54.6
Phvul.008G107300 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 1.8e-46 190.3 244 52.9
Potri.006G096700 Populus trichocarpa HOM05D005866 ORTHO05D007078 3.9e-46 189.1 239 47.7
arahy.Tifrunner.gnm1.ann1.Q1H550 Arachis hypogaea HOM05D005866 ORTHO05D007078 7.4e-45 184.9 245 47.3
Thecc.05G021700 Theobroma cacao HOM05D005866 ORTHO05D007078 9.7e-45 184.5 255 55.3
vmacro08602 Vaccinium macrocarpon HOM05D005866 ORTHO05D007078 3.7e-44 182.6 240 57.1
Manes.09G102400 Manihot esculenta HOM05D005866 ORTHO05D007078 1.4e-43 180.6 213 60.6
Duzib128G1899 Durio zibethinus HOM05D005866 ORTHO05D007078 9.1e-43 177.9 255 56.5
GSVIVG01034004001 Vitis vinifera HOM05D000012 ORTHO05D000567 9.1e-43 177.9 241 56.8
Ciclev10012537m.g Citrus clementina HOM05D005866 ORTHO05D007078 2.0e-42 176.8 238 58.4
A05p39790 Brassica napus HOM05D005866 ORTHO05D007078 4.5e-42 175.6 256 52.7
BraA05t22763Z Brassica rapa HOM05D005866 ORTHO05D007078 4.5e-42 175.6 256 52.7
Cpa.g.sc56.117 Carica papaya HOM05D005866 ORTHO05D007078 5.9e-42 175.3 240 57.1
Carub.0003s0821 Capsella rubella HOM05D005866 ORTHO05D007078 7.7e-42 174.9 237 54.0
C05p58830 Brassica napus HOM05D005866 ORTHO05D007078 1.0e-41 174.5 256 52.7
BolC5t34535H Brassica oleracea HOM05D005866 ORTHO05D007078 1.3e-41 174.1 256 52.7
CSS0007949 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 1.7e-41 173.7 191 64.4
CSS0025068 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 1.7e-41 173.7 191 64.4
arahy.Tifrunner.gnm1.ann1.LP8IIZ Arachis hypogaea HOM05D005866 ORTHO05D007078 2.9e-41 172.9 242 45.9
BcaC09g48050 Brassica carinata HOM05D005866 ORTHO05D007078 5.0e-41 172.2 241 56.0
Gohir.D01G215200 Gossypium hirsutum HOM05D005866 ORTHO05D007078 6.5e-41 171.8 254 42.9
BcaC05g29639 Brassica carinata HOM05D005866 ORTHO05D007078 8.5e-41 171.4 256 52.3
Haze_20956 Corylus avellana HOM05D005866 ORTHO05D007078 1.9e-40 170.2 239 56.9
TAR623G0986 Trochodendron aralioides HOM05D005866 ORTHO05D007078 1.9e-40 170.2 246 52.0
BolC1t05477H Brassica oleracea HOM05D005866 ORTHO05D007078 4.2e-40 169.1 241 55.6
Peaxi162Scf00141g00718 Petunia axillaris HOM05D005866 ORTHO05D007078 5.5e-40 168.7 240 57.9
AUR62042946 Chenopodium quinoa HOM05D005866 ORTHO05D007078 7.2e-40 168.3 229 43.7
AT3G09050 Arabidopsis thaliana HOM05D005866 ORTHO05D007078 9.4e-40 167.9 255 51.0
Sp3g07500 Schrenkiella parvula HOM05D005866 ORTHO05D007078 1.2e-39 167.5 245 52.2
TWI74G1551 Tripterygium wilfordii HOM05D005866 ORTHO05D007078 1.6e-39 167.2 239 56.5
arahy.Tifrunner.gnm1.ann1.QNAF0W Arachis hypogaea HOM05D005866 ORTHO05D007078 2.7e-39 166.4 216 46.3
BcaC09g48005 Brassica carinata HOM05D005866 ORTHO05D007078 2.7e-39 166.4 220 58.6
Aqoxy1G00701 Aquilegia oxysepala HOM05D005866 ORTHO05D007078 3.6e-39 166.0 236 44.5
PGR031G2542 Punica granatum HOM05D005866 ORTHO05D007078 6.1e-39 165.2 217 59.4
Sopen10g034540 Solanum pennellii HOM05D005866 ORTHO05D007078 6.1e-39 165.2 215 60.9
PGSC0003DMG400011090 Solanum tuberosum HOM05D005866 ORTHO05D007078 1.0e-38 164.5 209 62.2
ECA247G0127 Erigeron canadensis HOM05D005866 ORTHO05D007078 1.4e-38 164.1 191 48.2
Thhalv10021354m.g Eutrema salsugineum HOM05D005866 ORTHO05D007078 1.4e-38 164.1 259 51.7
Nitab4.5_0004912g0060 Nicotiana tabacum HOM05D005866 ORTHO05D007078 1.8e-38 163.7 216 57.9
AL3G20110 Arabidopsis lyrata HOM05D005866 ORTHO05D007078 2.3e-38 163.3 239 50.6
BraA01t04319Z Brassica rapa HOM05D005866 ORTHO05D007078 6.7e-38 161.8 208 47.1
CAN.G1297.4 Capsicum annuum HOM05D005866 ORTHO05D007078 1.1e-37 161.0 241 56.4
Gohir.A01G225500 Gossypium hirsutum HOM05D005866 ORTHO05D007078 2.0e-37 160.2 241 53.1
CsaV3_4G026010 Cucumis sativus L. HOM05D005866 ORTHO05D007078 2.6e-37 159.8 241 44.4
FAN09G2814 Fragaria x ananassa HOM05D000012 ORTHO05D007078 2.6e-37 159.8 248 47.2
Nn2g11373 Nelumbo nucifera HOM05D005866 ORTHO05D007078 2.6e-37 159.8 213 59.2
CARHR083410 Cardamine hirsuta HOM05D005866 ORTHO05D007078 3.3e-37 159.5 239 52.3
Lj2C80T14 Lonicera japonica HOM05D005866 ORTHO05D007078 5.7e-37 158.7 240 43.8
AUR62025814 Chenopodium quinoa HOM05D005866 ORTHO05D007078 7.4e-37 158.3 216 44.4
COL.COLO4_14593 Corchorus olitorius HOM05D005866 ORTHO05D007078 7.4e-37 158.3 257 52.9
ClCG04G007220 Citrullus lanatus HOM05D005866 ORTHO05D007078 9.7e-37 157.9 208 53.8
Aa31LG3G1580 Aethionema arabicum HOM05D005866 ORTHO05D007078 1.7e-36 157.1 222 42.8
Hund02698 Selenicereus undatus HOM05D005866 ORTHO05D007078 1.7e-36 157.1 239 40.2
FvH4_6g11980 Fragaria vesca HOM05D005866 ORTHO05D007078 2.2e-36 156.8 248 48.0
Lsat_1_v5_gn_9_36061 Lactuca sativa HOM05D005866 ORTHO05D007078 2.8e-36 156.4 217 53.5
FAN14G3518 Fragaria x ananassa HOM05D005866 ORTHO05D007078 6.3e-36 155.2 249 42.6
FAN02G1355 Fragaria x ananassa HOM05D005866 ORTHO05D007078 1.1e-35 154.5 248 47.6
Sc01g0006840 Simmondsia chinensis HOM05D005866 ORTHO05D007078 1.1e-35 154.5 236 53.8
FAN05G0379 Fragaria x ananassa HOM05D000012 ORTHO05D000567 1.4e-35 154.1 248 52.0
FAN14G3397 Fragaria x ananassa HOM05D000012 ORTHO05D000567 1.4e-35 154.1 248 47.2
Sopen09g007090 Solanum pennellii HOM05D005866 ORTHO05D007078 1.4e-35 154.1 231 54.1
Solyc10g085080.3 Solanum lycopersicum HOM05D005866 ORTHO05D007078 1.8e-35 153.7 265 52.5
Sed0005881 Sechium edule HOM05D005866 ORTHO05D007078 4.1e-35 152.5 246 49.6
unitig_578.g15896 Utricularia gibba HOM05D005866 ORTHO05D007078 4.1e-35 152.5 245 51.8
Ah.12g060060 Amaranthus hybridus HOM05D005866 ORTHO05D007078 7.0e-35 151.8 234 51.3
arahy.Tifrunner.gnm1.ann1.6JA19R Arachis hypogaea HOM05D005866 ORTHO05D007078 7.0e-35 151.8 212 45.3
MD04G1147400 Malus domestica HOM05D005866 ORTHO05D007078 9.1e-35 151.4 241 43.2
THA.LOC104816219 Tarenaya hassleriana HOM05D005866 ORTHO05D007078 1.2e-34 151.0 235 52.8
Nitab4.5_0000652g0170 Nicotiana tabacum HOM05D005866 ORTHO05D007078 1.6e-34 150.6 230 54.3
MELO3C003227.2 Cucumis melo HOM05D005866 ORTHO05D007078 5.9e-34 148.7 209 52.2
PSO384G0902 Papaver somniferum HOM05D005866 ORTHO05D007078 6.5e-33 145.2 236 50.4
Prupe.6G271100 Prunus persica HOM05D000012 ORTHO05D000567 1.5e-32 144.1 221 49.8
DCAR_015452 Daucus carota HOM05D005866 ORTHO05D007078 3.2e-32 142.9 208 55.3
ECA247G1841 Erigeron canadensis HOM05D005866 ORTHO05D007078 3.2e-32 142.9 155 51.6
Nitab4.5_0000008g0810 Nicotiana tabacum HOM05D005866 ORTHO05D007078 4.2e-32 142.5 243 52.3
Atru.chr8.2203 Acer truncatum HOM05D005866 ORTHO05D007078 7.2e-32 141.7 244 41.8
CDE03G0505 Ceratophyllum demersum HOM05D005866 ORTHO05D007078 1.6e-31 140.6 205 53.2
Gorai.002G261300 Gossypium raimondii HOM05D005866 ORTHO05D007078 3.6e-31 139.4 241 50.2
MSTRG.5595 Avicennia marina HOM05D005866 ORTHO05D007078 1.0e-30 137.9 241 50.2
Nitab4.5_0001837g0050 Nicotiana tabacum HOM05D005866 ORTHO05D007078 2.3e-30 136.7 245 50.6
Eucgr.B02792 Eucalyptus grandis HOM05D005866 ORTHO05D007078 8.8e-30 134.8 204 54.9
PGSC0003DMG400020319 Solanum tuberosum HOM05D005866 ORTHO05D007078 8.8e-30 134.8 243 49.8
BcaC09g48006 Brassica carinata HOM05D005866 ORTHO05D007078 3.3e-29 132.9 222 41.0
TAR633G2503 Trochodendron aralioides HOM05D005866 ORTHO05D007078 4.4e-29 132.5 131 52.7
Solyc09g014215.2 Solanum lycopersicum HOM05D005866 ORTHO05D007078 7.5e-29 131.7 246 49.2
Cc06_g01630 Coffea canephora HOM05D005866 ORTHO05D007078 9.7e-29 131.3 205 53.2
SGA_v2.0_scaffold85G26760 Striga asiatica HOM05D005866 ORTHO05D007078 9.7e-29 131.3 127 52.8
CAN.G338.58 Capsicum annuum HOM05D005866 ORTHO05D007078 1.3e-28 131.0 243 49.4
Os01g0853000 Oryza sativa ssp. japonica HOM05D005866 ORTHO05D007078 1.3e-28 131.0 212 44.8
Zm00001eb367320 Zea mays HOM05D005866 ORTHO05D007078 8.2e-28 128.3 213 42.3
CANSAT35G0638 Cannabis sativa HOM05D005866 ORTHO05D007078 4.1e-27 125.9 240 47.1
Lj2P1203T18 Lonicera japonica HOM05D005866 ORTHO05D007078 5.0e-25 119.0 128 51.6
RcHm_v2.0_Chr3g0463811 Rosa chinensis HOM05D005866 ORTHO05D007078 2.5e-24 116.7 133 48.9
Migut.J00221 Erythranthe guttata HOM05D005866 ORTHO05D007078 2.1e-23 113.6 198 53.5
Peaxi162Scf00009g01923 Petunia axillaris HOM05D005866 ORTHO05D007078 2.1e-23 113.6 244 44.3
PSO339G5866 Papaver somniferum HOM05D005866 ORTHO05D007078 8.0e-23 111.7 184 51.6
ATR0618G104 Amborella trichopoda HOM05D005866 ORTHO05D007078 2.3e-22 110.2 128 43.8
Actinidia05342 Actinidia chinensis HOM05D005866 ORTHO05D007078 6.8e-22 108.6 177 48.6
EL10Ac6g13875 Beta vulgaris HOM05D005866 ORTHO05D007078 6.3e-20 102.1 112 46.4
Dinv37082 Davidia involucrata HOM05D005866 ORTHO05D007078 3.0e-14 83.2 98 49.0
SEGI_33363 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 1.2e-13 81.3 203 27.6
AagrBONN_evm.TU.Sc2ySwM_117.2545 Anthoceros agrestis HOM05D005866 ORTHO05D007078 4.4e-13 79.3 215 26.0
SEGI_17473 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 6.3e-12 75.5 182 28.0
Actinidia01118 Actinidia chinensis HOM05D005866 ORTHO05D007078 8.3e-12 75.1 73 53.4
Pp3c5_19930 Physcomitrium patens HOM05D005866 ORTHO05D007078 2.4e-11 73.6 208 26.4
Mapoly0004s0086 Marchantia polymorpha HOM05D005866 ORTHO05D007078 1.2e-10 71.2 215 25.6
SMO143G0029 Selaginella moellendorffii HOM05D001879 ORTHO05D007648 1.7e-09 67.4 211 25.1
Lalb_Chr03g0043011 Lupinus albus HOM05D005866 ORTHO05D007078 2.9e-09 66.6 82 47.6
Actinidia01119 Actinidia chinensis HOM05D005866 ORTHO05D007078 5.0e-09 65.9 84 51.2
Mapoly0010s0127 Marchantia polymorpha HOM05D005866 ORTHO05D007078 4.3e-08 62.8 189 28.0
HanXRQChr10g0287001 Helianthus annuus HOM05D005866 ORTHO05D007078 9.5e-08 61.6 65 52.3
ATR0618G115 Amborella trichopoda HOM05D005866 ORTHO05D007078 3.0e-06 56.6 53 52.8


User provided reference genes

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