Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0331G0781 Vigna mungo HOM05D035928 ORTHO05D437741 4.3e-116 421.4 223 100.0
VMungo1127G2195 Vigna mungo HOM05D000733 ORTHO05D000644 3.4e-20 102.8 108 60.2
Phvul.011G097900 Phaseolus vulgaris HOM05D000733 ORTHO05D000644 7.9e-17 91.7 108 51.9
Glyma.12G093600 Glycine max HOM05D000733 ORTHO05D000644 7.4e-15 85.1 69 59.4
Glyma.11G179900 Glycine max HOM05D000733 ORTHO05D000644 1.1e-13 81.3 69 59.4
arahy.Tifrunner.gnm1.ann1.TM123A Arachis hypogaea HOM05D000733 ORTHO05D000644 5.8e-12 75.5 63 55.6
arahy.Tifrunner.gnm1.ann1.7FY2VB Arachis hypogaea HOM05D000733 ORTHO05D000644 7.6e-12 75.1 63 54.0
Phvul.005G120900 Phaseolus vulgaris HOM05D000733 ORTHO05D000644 2.9e-11 73.2 67 53.7
Glyma.12G187600 Glycine max HOM05D000733 ORTHO05D000644 3.8e-11 72.8 69 53.6
Medtr2g086790 Medicago truncatula HOM05D000733 ORTHO05D000644 8.4e-11 71.6 67 52.2
TPR.G4165 Trifolium pratense HOM05D000733 ORTHO05D000644 8.4e-11 71.6 67 50.7
Ah.08g210090 Amaranthus hybridus HOM05D000733 ORTHO05D000644 1.1e-10 71.2 63 50.8
MSTRG.12383 Avicennia marina HOM05D000733 ORTHO05D000644 1.4e-10 70.9 63 50.8
Ca_19462_v3 Cicer arietinum L. HOM05D000733 ORTHO05D000644 7.1e-10 68.6 74 48.6
Psat5g260240 Pisum sativum HOM05D000733 ORTHO05D000644 9.3e-10 68.2 68 48.5
TPR.G4648 Trifolium pratense HOM05D000733 ORTHO05D000644 9.3e-10 68.2 72 50.0
CiPaw.13G131100 Carya illinoinensis HOM05D000733 ORTHO05D000644 1.2e-09 67.8 68 52.9
Nitab4.5_0000380g0150 Nicotiana tabacum HOM05D000733 ORTHO05D000644 1.2e-09 67.8 63 52.4
Haze_23316 Corylus avellana HOM05D000733 ORTHO05D000644 1.6e-09 67.4 66 48.5
Medtr4g051880 Medicago truncatula HOM05D000733 ORTHO05D000644 1.6e-09 67.4 94 46.8
Oeu035583.1 Olea europaea HOM05D000733 ORTHO05D000644 1.6e-09 67.4 64 51.6
Potri.006G204200 Populus trichocarpa HOM05D000733 ORTHO05D000644 1.6e-09 67.4 61 47.5
TAR623G0843 Trochodendron aralioides HOM05D000733 ORTHO05D000644 2.1e-09 67.0 63 49.2
Ciclev10029271m.g Citrus clementina HOM05D000733 ORTHO05D000644 2.7e-09 66.6 63 47.6
Glyma.13G313700 Glycine max HOM05D000733 ORTHO05D000644 4.6e-09 65.9 69 50.7
Lj3g0011511 Lotus japonicus HOM05D000733 ORTHO05D000644 6.0e-09 65.5 71 50.7
Dinv08136 Davidia involucrata HOM05D000733 ORTHO05D000644 7.9e-09 65.1 63 46.0
Migut.J00712 Erythranthe guttata HOM05D000733 ORTHO05D000644 1.3e-08 64.3 63 49.2
Sed0009407 Sechium edule HOM05D000733 ORTHO05D000644 1.3e-08 64.3 61 50.8
VMungo1080G0005 Vigna mungo HOM05D000733 ORTHO05D000644 1.3e-08 64.3 69 49.3
QL01p011317 Quercus lobata HOM05D000733 ORTHO05D000644 1.8e-08 63.9 67 47.8
AUR62037051 Chenopodium quinoa HOM05D000733 ORTHO05D000644 2.3e-08 63.5 63 44.4
BcaB01g00363 Brassica carinata HOM05D000733 ORTHO05D000644 3.0e-08 63.2 60 48.3
CANSAT64G0487 Cannabis sativa HOM05D000733 ORTHO05D000644 3.9e-08 62.8 60 50.0
BcaC07g39612 Brassica carinata HOM05D000733 ORTHO05D000644 5.1e-08 62.4 60 48.3
C08p27710 Brassica napus HOM05D000733 ORTHO05D000644 5.1e-08 62.4 60 48.3
BolC8t50391H Brassica oleracea HOM05D000733 ORTHO05D000644 5.1e-08 62.4 60 48.3
BraA09t40017Z Brassica rapa HOM05D000733 ORTHO05D000644 5.1e-08 62.4 60 48.3
Lj3g0014557 Lotus japonicus HOM05D000733 ORTHO05D000644 5.1e-08 62.4 93 41.9
Peaxi162Scf00755g00025 Petunia axillaris HOM05D000733 ORTHO05D000644 5.1e-08 62.4 63 49.2
MSTRG.21014 Avicennia marina HOM05D000733 ORTHO05D000644 6.7e-08 62.0 63 49.2
AUR62006280 Chenopodium quinoa HOM05D000733 ORTHO05D000644 6.7e-08 62.0 63 42.9
Oeu009053.1 Olea europaea HOM05D000733 ORTHO05D000644 6.7e-08 62.0 60 43.3
arahy.Tifrunner.gnm1.ann1.C0BD5K Arachis hypogaea HOM05D000733 ORTHO05D000644 8.7e-08 61.6 73 46.6
arahy.Tifrunner.gnm1.ann1.PV2ISY Arachis hypogaea HOM05D000733 ORTHO05D000644 8.7e-08 61.6 73 46.6
Migut.N02461 Erythranthe guttata HOM05D000733 ORTHO05D000644 1.1e-07 61.2 63 44.4
SalBow3G2003 Salvia bowleyana HOM05D000733 ORTHO05D000644 1.1e-07 61.2 62 48.4
PGSC0003DMG400028151 Solanum tuberosum HOM05D000733 ORTHO05D000644 1.1e-07 61.2 63 44.4
THA.LOC104809958 Tarenaya hassleriana HOM05D000733 ORTHO05D000644 1.1e-07 61.2 62 45.2
VMungo0720G0903 Vigna mungo HOM05D035928 ORTHO05D434629 1.1e-07 61.2 54 64.8
Carub.0005s1886 Capsella rubella HOM05D000733 ORTHO05D000644 1.5e-07 60.8 60 48.3
Sopen10g032470 Solanum pennellii HOM05D000733 ORTHO05D000644 1.5e-07 60.8 63 42.9
CARHR162240 Cardamine hirsuta HOM05D000733 ORTHO05D000644 1.9e-07 60.5 60 46.7
Cpa.g.sc104.47 Carica papaya HOM05D000733 ORTHO05D000644 1.9e-07 60.5 63 42.9
Nn2g14280 Nelumbo nucifera HOM05D000733 ORTHO05D000644 1.9e-07 60.5 58 48.3
GSVIVG01036051001 Vitis vinifera HOM05D000733 ORTHO05D000644 1.9e-07 60.5 63 54.0
A09p45560 Brassica napus HOM05D000733 ORTHO05D000644 2.5e-07 60.1 60 46.7
Manes.09G046700 Manihot esculenta HOM05D000733 ORTHO05D000644 2.5e-07 60.1 64 45.3
TWI31G1288 Tripterygium wilfordii HOM05D000733 ORTHO05D000644 2.5e-07 60.1 62 41.9
Atru.chr3.3137 Acer truncatum HOM05D000733 ORTHO05D000644 3.3e-07 59.7 67 44.8
AL5G33130 Arabidopsis lyrata HOM05D000733 ORTHO05D000644 3.3e-07 59.7 60 46.7
Cfa009949 Carpinus fangiana HOM05D000733 ORTHO05D000644 3.3e-07 59.7 67 49.3
Thhalv10010723m.g Eutrema salsugineum HOM05D000733 ORTHO05D000644 3.3e-07 59.7 60 48.3
MD12G1038700 Malus domestica HOM05D000733 ORTHO05D000644 3.3e-07 59.7 63 46.0
Nitab4.5_0001287g0060 Nicotiana tabacum HOM05D000733 ORTHO05D000644 3.3e-07 59.7 63 44.4
Oeu035651.1 Olea europaea HOM05D000733 ORTHO05D000644 3.3e-07 59.7 63 47.6
SalBow5G0187 Salvia bowleyana HOM05D000733 ORTHO05D000644 3.3e-07 59.7 63 46.0
MSTRG.10403 Avicennia marina HOM05D000733 ORTHO05D000644 4.3e-07 59.3 63 47.6
Oeu048844.1 Olea europaea HOM05D000733 ORTHO05D000644 4.3e-07 59.3 68 45.6
Thecc.05G102500 Theobroma cacao HOM05D000733 ORTHO05D000644 4.3e-07 59.3 63 46.0
AUR62001542 Chenopodium quinoa HOM05D000733 ORTHO05D000644 7.4e-07 58.5 63 41.3
Duzib106G0562 Durio zibethinus HOM05D000733 ORTHO05D000644 7.4e-07 58.5 63 46.0
Solyc10g150145.1 Solanum lycopersicum HOM05D000733 ORTHO05D000644 7.4e-07 58.5 63 41.3
Ah.15g090450 Amaranthus hybridus HOM05D000733 ORTHO05D000644 9.6e-07 58.2 63 39.7
CsaV3_6G041060 Cucumis sativus L. HOM05D000733 ORTHO05D000644 9.6e-07 58.2 61 44.3
Oeu039622.1 Olea europaea HOM05D000733 ORTHO05D000644 9.6e-07 58.2 63 44.4
Sopen11g027580 Solanum pennellii HOM05D000733 ORTHO05D000644 9.6e-07 58.2 66 45.5
BraA05t22564Z Brassica rapa HOM05D000733 ORTHO05D000644 1.3e-06 57.8 62 41.9
Nitab4.5_0006167g0020 Nicotiana tabacum HOM05D000733 ORTHO05D000644 1.3e-06 57.8 63 41.3
Oeu031461.1 Olea europaea HOM05D000733 ORTHO05D000644 1.3e-06 57.8 63 44.4
Sp5g09830 Schrenkiella parvula HOM05D000733 ORTHO05D000644 1.3e-06 57.8 110 35.5
MSTRG.5902 Avicennia marina HOM05D000733 ORTHO05D000644 1.6e-06 57.4 60 45.0
A05p37680 Brassica napus HOM05D000733 ORTHO05D000644 1.6e-06 57.4 62 41.9
COL.COLO4_29591 Corchorus olitorius HOM05D000733 ORTHO05D000644 1.6e-06 57.4 62 43.5
SHI12379 Sapria himalayana HOM05D000733 ORTHO05D000644 1.6e-06 57.4 118 38.1
TWI77G0547 Tripterygium wilfordii HOM05D000733 ORTHO05D000644 1.6e-06 57.4 63 41.3
CiPaw.09G020200 Carya illinoinensis HOM05D000733 ORTHO05D000644 2.1e-06 57.0 59 42.4
ClCG01G014960 Citrullus lanatus HOM05D000733 ORTHO05D000644 2.1e-06 57.0 61 45.9
Gohir.A04G058600 Gossypium hirsutum HOM05D000733 ORTHO05D000644 2.1e-06 57.0 63 44.4
Lalb_Chr24g0393411 Lupinus albus HOM05D000733 ORTHO05D000644 2.1e-06 57.0 104 35.6
Peaxi162Scf00388g00051 Petunia axillaris HOM05D000733 ORTHO05D000644 2.1e-06 57.0 63 39.7
BcaC05g29346 Brassica carinata HOM05D000733 ORTHO05D000644 2.8e-06 56.6 62 41.9
C05p56280 Brassica napus HOM05D000733 ORTHO05D000644 2.8e-06 56.6 62 41.9
BolC5t34291H Brassica oleracea HOM05D000733 ORTHO05D000644 2.8e-06 56.6 62 41.9
AUR62020241 Chenopodium quinoa HOM05D000733 ORTHO05D000644 2.8e-06 56.6 63 39.7
THA.LOC104816616 Tarenaya hassleriana HOM05D000733 ORTHO05D000644 2.8e-06 56.6 62 41.9
EL10Ac7g16804 Beta vulgaris HOM05D000733 ORTHO05D000644 3.7e-06 56.2 63 42.9
MELO3C024583.2 Cucumis melo HOM05D000733 ORTHO05D000644 3.7e-06 56.2 61 42.6
DCAR_008234 Daucus carota HOM05D000733 ORTHO05D000644 3.7e-06 56.2 63 42.9
Actinidia32049 Actinidia chinensis HOM05D000733 ORTHO05D000644 4.8e-06 55.8 63 39.7
BcaC02g09255 Brassica carinata HOM05D000733 ORTHO05D000644 4.8e-06 55.8 110 33.6
BcaC06g33393 Brassica carinata HOM05D000733 ORTHO05D000644 4.8e-06 55.8 110 33.6
A03p48890 Brassica napus HOM05D000733 ORTHO05D000644 4.8e-06 55.8 110 33.6
C04p40560 Brassica napus HOM05D000733 ORTHO05D000644 4.8e-06 55.8 110 33.6
BolC4t25636H Brassica oleracea HOM05D000733 ORTHO05D000644 4.8e-06 55.8 110 33.6
BolC7t45216H Brassica oleracea HOM05D000733 ORTHO05D000644 4.8e-06 55.8 110 33.6
BraA03t13991Z Brassica rapa HOM05D000733 ORTHO05D000644 4.8e-06 55.8 110 33.6
ClCG01G011600 Citrullus lanatus HOM05D000733 ORTHO05D000644 4.8e-06 55.8 70 44.3
HanXRQChr13g0398321 Helianthus annuus HOM05D000733 ORTHO05D000644 4.8e-06 55.8 63 41.3
Lalb_Chr02g0154501 Lupinus albus HOM05D000733 ORTHO05D000644 4.8e-06 55.8 60 40.0
Sabra06G0157300 Salix brachista HOM05D000733 ORTHO05D000644 4.8e-06 55.8 62 41.9
Thecc.09G275400 Theobroma cacao HOM05D000733 ORTHO05D000644 4.8e-06 55.8 63 38.1
Aa31LG10G7520 Aethionema arabicum HOM05D000733 ORTHO05D000644 6.3e-06 55.5 60 41.7
CAN.G1245.9 Capsicum annuum HOM05D000733 ORTHO05D000644 6.3e-06 55.5 63 39.7
ECA233G2245 Erigeron canadensis HOM05D000733 ORTHO05D000644 6.3e-06 55.5 63 39.7
Psat7g187200 Pisum sativum HOM05D000733 ORTHO05D000644 6.3e-06 55.5 94 38.3
PGR142G2559 Punica granatum HOM05D000733 ORTHO05D000644 6.3e-06 55.5 62 45.2
VMungo0720G2587 Vigna mungo HOM05D018841 ORTHO05D434138 6.3e-06 55.5 109 38.5
EL10Ac7g16315 Beta vulgaris HOM05D000733 ORTHO05D000644 8.2e-06 55.1 63 38.1
Gohir.D04G094800 Gossypium hirsutum HOM05D000733 ORTHO05D000644 8.2e-06 55.1 63 42.9
Gorai.009G397400 Gossypium raimondii HOM05D000733 ORTHO05D000644 8.2e-06 55.1 63 42.9
HanXRQChr15g0494881 Helianthus annuus HOM05D000733 ORTHO05D000644 8.2e-06 55.1 62 41.9
Peaxi162Scf00211g00111 Petunia axillaris HOM05D000733 ORTHO05D000644 8.2e-06 55.1 63 41.3
Psat5g260200 Pisum sativum HOM05D000733 ORTHO05D000644 8.2e-06 55.1 69 39.1
PGSC0003DMG400019639 Solanum tuberosum HOM05D000733 ORTHO05D000644 8.2e-06 55.1 66 43.9


User provided reference genes

Program Settings