Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 1.5e-289 998.8 492 100.0
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 6.1e-264 913.7 493 91.5
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 1.7e-242 842.4 500 84.0
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 2.1e-240 835.5 497 83.1
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 4.0e-215 751.5 494 75.3
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 4.6e-211 738.0 507 74.2
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 1.1e-209 733.4 507 74.0
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 3.3e-209 731.9 507 73.8
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 4.3e-209 731.5 483 76.2
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 1.2e-206 723.4 481 74.8
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 2.1e-203 712.6 492 74.2
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 1.5e-198 696.4 489 72.0
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 2.4e-191 672.5 498 66.5
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 5.3e-191 671.4 512 68.8
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 6.9e-191 671.0 505 67.1
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 3.8e-189 665.2 503 69.2
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 6.5e-189 664.5 513 68.2
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 1.1e-188 663.7 513 68.2
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 2.5e-188 662.5 505 66.5
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 1.1e-185 653.7 471 68.8
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 3.1e-183 645.6 526 62.7
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 5.3e-183 644.8 494 66.0
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 5.3e-183 644.8 503 66.2
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 7.0e-183 644.4 495 66.5
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.5e-182 643.3 495 67.3
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.0e-182 642.9 495 66.7
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 5.9e-182 641.3 495 67.1
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 7.7e-182 641.0 495 66.1
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 6.5e-181 637.9 465 68.6
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 1.1e-180 637.1 436 70.4
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 1.9e-180 636.3 501 64.5
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 4.7e-179 631.7 494 65.0
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 8.0e-179 630.9 498 66.1
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 8.0e-179 630.9 497 65.4
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 3.0e-178 629.0 504 63.5
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 5.2e-178 628.2 497 64.4
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 5.2e-178 628.2 521 63.1
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 5.2e-178 628.2 507 63.7
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 5.2e-178 628.2 506 63.8
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 1.1e-177 627.1 504 63.7
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 1.5e-177 626.7 486 64.4
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 2.6e-177 625.9 447 69.6
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 3.3e-177 625.5 482 65.4
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 4.4e-177 625.2 434 70.5
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 7.4e-177 624.4 544 61.4
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 4.8e-176 621.7 457 65.2
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 3.1e-175 619.0 442 69.0
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 4.1e-175 618.6 516 61.4
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 1.0e-173 614.0 464 64.9
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 3.8e-173 612.1 478 63.6
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 1.5e-172 610.1 480 64.0
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 9.4e-172 607.4 507 61.7
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 1.2e-171 607.1 484 63.0
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 4.7e-171 605.1 379 74.9
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 1.4e-170 603.6 486 63.0
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 1.4e-170 603.6 497 61.0
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 1.4e-170 603.6 422 68.7
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 2.3e-170 602.8 493 63.7
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 4.0e-170 602.1 484 62.2
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 6.7e-170 601.3 484 62.2
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 6.7e-170 601.3 484 62.2
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 8.8e-170 600.9 384 74.5
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 4.4e-169 598.6 486 62.8
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 5.7e-169 598.2 498 62.9
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 5.7e-169 598.2 512 62.5
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 1.3e-168 597.0 453 64.9
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 1.1e-167 594.0 498 62.7
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 1.1e-167 594.0 494 61.5
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 1.8e-167 593.2 424 66.5
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 3.1e-167 592.4 447 64.9
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 5.3e-167 591.7 441 64.2
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 1.6e-166 590.1 505 60.0
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 2.7e-166 589.3 495 60.8
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 2.7e-166 589.3 480 61.5
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 5.9e-166 588.2 462 64.5
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 1.7e-165 586.6 447 64.4
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 3.2e-164 582.4 500 61.2
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 1.4e-162 577.0 503 59.8
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 4.4e-161 572.0 489 58.9
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 5.7e-161 571.6 482 60.4
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 5.7e-161 571.6 475 62.5
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 4.8e-160 568.5 511 58.7
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 1.4e-159 567.0 362 73.8
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 4.1e-159 565.5 442 64.0
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 1.6e-155 553.5 479 60.5
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 8.9e-154 547.7 439 61.7
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 3.7e-152 542.3 692 45.7
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 8.3e-152 541.2 426 61.3
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 3.1e-151 539.3 433 61.2
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 9.2e-151 537.7 440 60.5
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 1.6e-150 537.0 498 57.4
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 4.0e-146 522.3 434 60.1
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 2.0e-145 520.0 413 63.7
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 1.3e-144 517.3 384 65.9
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 1.4e-143 513.8 508 57.1
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 4.2e-119 432.6 335 62.1
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 4.6e-118 429.1 254 77.2
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 6.5e-96 355.5 239 71.5
Peaxi162Scf00103g00911 Petunia axillaris HOM05D006344 ORTHO05D007744 1.1e-90 338.2 192 78.6
Solyc10g037890.3 Solanum lycopersicum HOM05D006344 ORTHO05D007744 8.5e-80 302.0 182 75.8
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 3.9e-77 293.1 314 53.8
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 3.3e-76 290.0 280 55.7
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 6.9e-74 282.3 291 54.0
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 1.5e-73 281.2 480 35.8
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 2.2e-72 277.3 250 58.8
SEGI_37248 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 2.1e-70 270.8 221 55.2
PGSC0003DMG400003447 Solanum tuberosum HOM05D006344 ORTHO05D007744 5.7e-68 262.7 162 73.5
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 1.1e-58 231.9 564 29.6
Atru.chr5.115 Acer truncatum HOM05D006344 ORTHO05D007744 5.3e-58 229.6 259 52.5
Mapoly0089s0048 Marchantia polymorpha HOM05D006344 ORTHO05D007744 5.9e-57 226.1 603 29.2
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 2.6e-52 210.7 447 31.1
Lj9A555T32 Lonicera japonica HOM05D006344 ORTHO05D007744 8.6e-40 169.1 132 63.6
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 4.0e-37 160.2 362 30.4
SEGI_14599 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 1.5e-36 158.3 213 45.5
HanXRQChr09g0257941 Helianthus annuus HOM05D006344 ORTHO05D007744 5.4e-26 123.2 108 57.4
SEGI_30390 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 3.5e-25 120.6 123 48.8
Actinidia26517 Actinidia chinensis HOM05D006344 ORTHO05D007744 1.2e-20 105.5 62 71.0
CDE06G0422 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 3.5e-17 94.0 70 61.4
Peaxi162Scf00562g00069 Petunia axillaris HOM05D006344 ORTHO05D007744 3.3e-15 87.4 143 37.1
CBR_g48168 Chara braunii HOM05D006344 ORTHO05D007744 1.8e-13 81.6 156 34.0
Peaxi162Scf00562g00611 Petunia axillaris HOM05D006344 ORTHO05D007744 1.3e-11 75.5 82 56.1
Cre16.g684900 Chlamydomonas reinhardtii HOM05D006344 ORTHO05D007744 8.4e-11 72.8 286 24.8
COL.COLO4_10413 Corchorus olitorius HOM05D006344 ORTHO05D007744 2.4e-10 71.2 68 55.9
BcaB08g35012 Brassica carinata HOM05D006344 ORTHO05D007744 1.6e-09 68.6 42 66.7
CBR_g48169 Chara braunii HOM05D006344 ORTHO05D007744 1.5e-07 62.0 83 39.8
HanXRQChr01g0015371 Helianthus annuus HOM05D000263 ORTHO05D000213 5.6e-07 60.1 45 57.8


User provided reference genes

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