Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 9.6e-121 436.8 215 100.0
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 6.9e-95 350.9 235 79.1
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 4.0e-82 308.5 242 66.9
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 8.2e-80 300.8 239 66.5
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 1.4e-79 300.1 238 68.1
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 1.9e-76 289.7 237 66.2
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.0e-74 283.9 244 64.8
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 1.0e-74 283.9 192 72.4
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 3.0e-74 282.3 239 63.6
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 3.4e-73 278.9 193 73.1
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 1.3e-72 276.9 174 81.0
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 2.8e-72 275.8 192 69.8
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 8.3e-72 274.2 241 58.9
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 2.4e-71 272.7 192 68.8
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.4e-71 272.7 192 68.8
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 4.1e-71 271.9 192 68.8
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 4.1e-71 271.9 191 70.7
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 9.1e-71 270.8 192 68.2
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 1.2e-70 270.4 234 60.7
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.6e-70 270.0 192 68.2
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 3.5e-70 268.9 192 68.8
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 5.9e-70 268.1 192 67.7
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 2.2e-69 266.2 237 61.2
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 2.9e-69 265.8 193 67.9
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 6.5e-69 264.6 169 75.7
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 8.5e-69 264.2 207 65.2
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 1.2e-67 260.4 211 62.6
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 1.6e-67 260.0 196 64.8
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 8.0e-67 257.7 236 57.6
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 1.4e-66 256.9 187 67.4
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 4.0e-66 255.4 187 66.8
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 3.4e-65 252.3 209 61.7
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 7.5e-65 251.1 234 57.7
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 7.5e-65 251.1 168 72.6
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 9.8e-65 250.8 189 68.3
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 1.3e-64 250.4 223 57.0
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 1.7e-64 250.0 184 66.8
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 2.2e-64 249.6 227 58.6
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 6.3e-64 248.1 198 64.6
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 8.3e-64 247.7 185 66.5
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 1.8e-63 246.5 186 66.7
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 2.4e-63 246.1 186 65.1
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 4.1e-63 245.4 188 64.4
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 1.2e-62 243.8 182 65.9
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 2.0e-62 243.0 174 69.0
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 2.7e-62 242.7 182 64.8
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 4.5e-62 241.9 186 65.6
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 4.5e-62 241.9 192 63.0
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 5.9e-62 241.5 183 66.1
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 5.9e-62 241.5 192 64.1
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 7.7e-62 241.1 224 57.6
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 1.7e-61 240.0 183 65.6
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 3.8e-61 238.8 184 64.1
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 8.6e-61 237.7 185 63.2
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 1.1e-60 237.3 191 64.4
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 1.5e-60 236.9 189 62.4
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 1.5e-60 236.9 184 63.0
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 1.9e-60 236.5 183 65.6
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 2.5e-60 236.1 191 63.4
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 3.3e-60 235.7 183 66.1
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 4.3e-60 235.3 222 57.7
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 4.3e-60 235.3 189 62.4
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 5.6e-60 235.0 214 59.8
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 5.6e-60 235.0 191 62.8
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 7.3e-60 234.6 192 63.5
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 9.5e-60 234.2 182 62.6
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 1.2e-59 233.8 185 62.7
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.2e-59 233.8 191 62.3
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 2.1e-59 233.0 182 62.6
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 2.1e-59 233.0 183 61.7
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 2.8e-59 232.6 231 53.2
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 4.7e-59 231.9 185 62.2
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 6.1e-59 231.5 178 66.3
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 6.1e-59 231.5 182 63.2
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 1.0e-58 230.7 185 61.6
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 1.4e-58 230.3 185 61.6
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 2.3e-58 229.6 185 61.1
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 5.2e-58 228.4 185 61.1
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 6.8e-58 228.0 185 61.6
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 2.0e-57 226.5 226 52.2
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 6.4e-56 221.5 175 64.0
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 1.3e-53 213.8 225 53.3
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 2.8e-51 206.1 174 61.5
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.4e-50 203.8 174 60.9
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 8.9e-50 201.1 276 44.2
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 2.0e-46 189.9 191 56.0
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 3.9e-45 185.7 118 75.4
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 5.0e-45 185.3 185 53.0
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 6.6e-45 184.9 156 62.8
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 1.1e-44 184.1 165 58.8
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 2.1e-43 179.9 184 57.6
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 4.7e-43 178.7 119 72.3
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 4.7e-43 178.7 118 72.9
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 8.9e-42 174.5 203 52.2
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.2e-41 174.1 229 48.9
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 5.8e-41 171.8 176 54.5
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 7.5e-41 171.4 124 71.0
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 6.4e-40 168.3 162 58.0
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 1.6e-38 163.7 164 52.4
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 7.3e-36 154.8 121 64.5
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 1.3e-32 144.1 100 70.0
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 1.7e-32 143.7 145 56.6
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 1.4e-31 140.6 155 47.7
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 2.3e-29 133.3 178 42.7
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 8.6e-29 131.3 175 42.9
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 8.6e-29 131.3 134 56.0
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 7.3e-28 128.3 130 55.4
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 7.3e-28 128.3 109 62.4
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 2.8e-27 126.3 135 48.9
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.8e-26 123.6 78 75.6
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 7.1e-23 111.7 106 54.7
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 7.6e-17 91.7 145 37.2
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 8.4e-16 88.2 83 55.4
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 3.2e-15 86.3 52 67.3
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 1.2e-14 84.3 191 34.6
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 1.6e-14 84.0 87 54.0
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 1.9e-12 77.0 44 77.3
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 2.0e-09 67.0 45 64.4
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 5.8e-09 65.5 62 51.6
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 3.8e-08 62.8 41 68.3
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 4.2e-07 59.3 37 67.6
SEGI_24864 Sequoiadendron giganteum HOM05D006638 ORTHO05D008246 7.9e-06 55.1 63 44.4


User provided reference genes

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