Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0331G0526 Vigna mungo HOM05D007255 ORTHO05D009052 8.5e-54 213.4 106 100.0
Phvul.010G031200 Phaseolus vulgaris HOM05D007255 ORTHO05D009052 6.8e-43 177.2 95 93.7
Glyma.03G089600 Glycine max HOM05D007255 ORTHO05D009052 1.8e-40 169.1 95 87.4
arahy.Tifrunner.gnm1.ann1.UDT0KZ Arachis hypogaea HOM05D007255 ORTHO05D009052 2.0e-31 139.0 110 69.1
arahy.Tifrunner.gnm1.ann1.TV22BE Arachis hypogaea HOM05D007255 ORTHO05D009052 1.0e-30 136.7 110 68.2
Ca_23187_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 1.7e-30 136.0 105 69.5
Ca_30803_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 1.7e-30 136.0 105 69.5
Lj3g0001968 Lotus japonicus HOM05D007255 ORTHO05D009052 2.3e-30 135.6 102 73.5
Medtr8g011480 Medicago truncatula HOM05D007255 ORTHO05D009052 2.8e-28 128.6 106 68.9
MD10G1152600 Malus domestica HOM05D007255 ORTHO05D009052 3.6e-28 128.3 104 66.3
PGR044G0433 Punica granatum HOM05D007255 ORTHO05D009052 3.6e-28 128.3 81 79.0
Cpa.g.sc8.78 Carica papaya HOM05D007255 ORTHO05D009052 4.7e-28 127.9 102 67.6
RcHm_v2.0_Chr6g0282891 Rosa chinensis HOM05D007255 ORTHO05D009052 6.2e-28 127.5 102 66.7
Prupe.8G191100 Prunus persica HOM05D007255 ORTHO05D009052 8.0e-28 127.1 104 64.4
FAN15G3515 Fragaria x ananassa HOM05D007255 ORTHO05D009052 1.0e-27 126.7 102 66.7
FAN27G1291 Fragaria x ananassa HOM05D007255 ORTHO05D009052 1.0e-27 126.7 102 66.7
FvH4_2g17870 Fragaria vesca HOM05D007255 ORTHO05D009052 2.3e-27 125.6 102 66.7
TPR.G15196 Trifolium pratense HOM05D007255 ORTHO05D009052 2.3e-27 125.6 103 68.9
Thecc.01G211700 Theobroma cacao HOM05D007255 ORTHO05D009052 5.2e-27 124.4 102 64.7
CSS0043687 Camellia sinensis var. sinensis HOM05D007255 ORTHO05D009052 8.9e-27 123.6 105 65.7
Eucgr.K02090 Eucalyptus grandis HOM05D007255 ORTHO05D009052 1.5e-26 122.9 70 80.0
Lalb_Chr12g0210041 Lupinus albus HOM05D007255 ORTHO05D009052 2.0e-26 122.5 98 67.3
FAN24G0557 Fragaria x ananassa HOM05D007255 ORTHO05D009052 3.4e-26 121.7 102 64.7
SGA_v2.0_scaffold29G12102 Striga asiatica HOM05D007255 ORTHO05D009052 5.8e-26 120.9 109 62.4
COL.COLO4_28926 Corchorus olitorius HOM05D007255 ORTHO05D009052 7.5e-26 120.6 82 73.2
Migut.D00726 Erythranthe guttata HOM05D007255 ORTHO05D009052 7.5e-26 120.6 110 61.8
Thhalv10004862m.g Eutrema salsugineum HOM05D007255 ORTHO05D009052 7.5e-26 120.6 70 81.4
Duzib211G0668 Durio zibethinus HOM05D007255 ORTHO05D009052 9.8e-26 120.2 102 62.7
Potri.002G250500 Populus trichocarpa HOM05D007255 ORTHO05D009052 9.8e-26 120.2 87 70.1
Manes.13G054000 Manihot esculenta HOM05D007255 ORTHO05D009052 1.7e-25 119.4 82 70.7
SalBow6G0858 Salvia bowleyana HOM05D007255 ORTHO05D009052 1.7e-25 119.4 96 66.7
ECA248G0740 Erigeron canadensis HOM05D007255 ORTHO05D009052 2.2e-25 119.0 105 63.8
Hma1.2p1_0161F.1_g071360 Hydrangea macrophylla HOM05D007255 ORTHO05D009052 2.2e-25 119.0 105 63.8
THA.LOC104818995 Tarenaya hassleriana HOM05D007255 ORTHO05D009052 2.2e-25 119.0 102 61.8
GSVIVG01006076001 Vitis vinifera HOM05D007255 ORTHO05D009052 2.2e-25 119.0 105 61.9
AL3G18750 Arabidopsis lyrata HOM05D007255 ORTHO05D009052 3.7e-25 118.2 84 71.4
MSTRG.18490 Avicennia marina HOM05D007255 ORTHO05D009052 3.7e-25 118.2 112 63.4
Sed0001908 Sechium edule HOM05D007255 ORTHO05D009052 3.7e-25 118.2 79 73.4
A06p39120 Brassica napus HOM05D007255 ORTHO05D009052 6.4e-25 117.5 105 68.6
C07p39220 Brassica napus HOM05D007255 ORTHO05D009052 6.4e-25 117.5 102 64.7
BolC7t44442H Brassica oleracea HOM05D007255 ORTHO05D009052 6.4e-25 117.5 102 64.7
BraA06t26826Z Brassica rapa HOM05D007255 ORTHO05D009052 6.4e-25 117.5 105 68.6
AT3G07440 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 8.3e-25 117.1 84 70.2
CiPaw.13G054800 Carya illinoinensis HOM05D007255 ORTHO05D009052 8.3e-25 117.1 104 62.5
Ciclev10016497m.g Citrus clementina HOM05D007255 ORTHO05D009052 8.3e-25 117.1 85 71.8
unitig_62.g23864 Utricularia gibba HOM05D007255 ORTHO05D009052 8.3e-25 117.1 90 68.9
TWI18G1029 Tripterygium wilfordii HOM05D007255 ORTHO05D009052 1.1e-24 116.7 82 73.2
AT5G48530 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 1.4e-24 116.3 103 64.1
CANSAT01G0773 Cannabis sativa HOM05D007255 ORTHO05D009052 1.9e-24 115.9 103 59.2
Haze_03304 Corylus avellana HOM05D007255 ORTHO05D009052 1.9e-24 115.9 106 62.3
Aa31LG5G18020 Aethionema arabicum HOM05D007255 ORTHO05D009052 2.4e-24 115.5 87 67.8
BcaC06g30785 Brassica carinata HOM05D007255 ORTHO05D009052 2.4e-24 115.5 103 65.0
Gohir.A11G142200 Gossypium hirsutum HOM05D007255 ORTHO05D009052 2.4e-24 115.5 104 61.5
TAR365G1235 Trochodendron aralioides HOM05D007255 ORTHO05D009052 2.4e-24 115.5 108 58.3
DCAR_018628 Daucus carota HOM05D007255 ORTHO05D009052 3.2e-24 115.2 101 63.4
Nitab4.5_0000038g0080 Nicotiana tabacum HOM05D007255 ORTHO05D009052 3.2e-24 115.2 106 62.3
unitig_64.g29772 Utricularia gibba HOM05D007255 ORTHO05D009052 3.2e-24 115.2 85 69.4
Carub.0003s0699 Capsella rubella HOM05D007255 ORTHO05D009052 4.1e-24 114.8 70 77.1
Gorai.007G159200 Gossypium raimondii HOM05D007255 ORTHO05D009052 4.1e-24 114.8 104 59.6
Oeu064665.2 Olea europaea HOM05D007255 ORTHO05D009052 4.1e-24 114.8 88 69.3
Ah.11g051090 Amaranthus hybridus HOM05D007255 ORTHO05D009052 5.4e-24 114.4 105 58.1
Sp2g18890 Schrenkiella parvula HOM05D007255 ORTHO05D009052 5.4e-24 114.4 70 78.6
Nitab4.5_0005972g0030 Nicotiana tabacum HOM05D007255 ORTHO05D009052 7.0e-24 114.0 106 61.3
CARHR082090 Cardamine hirsuta HOM05D007255 ORTHO05D009052 1.2e-23 113.2 84 66.7
Gohir.D11G148500 Gossypium hirsutum HOM05D007255 ORTHO05D009052 1.6e-23 112.8 104 59.6
Lsat_1_v5_gn_5_178401 Lactuca sativa HOM05D007255 ORTHO05D009052 1.6e-23 112.8 66 78.8
Rhsim01G0248900 Rhododendron simsii HOM05D007255 ORTHO05D009052 1.6e-23 112.8 110 58.2
Sabra02G0190600 Salix brachista HOM05D007255 ORTHO05D009052 1.6e-23 112.8 102 59.8
Atru.chr6.3551 Acer truncatum HOM05D007255 ORTHO05D009052 2.0e-23 112.5 83 69.9
Dinv10428 Davidia involucrata HOM05D007255 ORTHO05D009052 2.0e-23 112.5 87 66.7
Actinidia34549 Actinidia chinensis HOM05D007255 ORTHO05D009052 2.7e-23 112.1 105 61.0
AUR62028710 Chenopodium quinoa HOM05D007255 ORTHO05D009052 2.7e-23 112.1 103 60.2
CsaV3_7G026920 Cucumis sativus L. HOM05D007255 ORTHO05D009052 2.7e-23 112.1 73 72.6
QL09p046138 Quercus lobata HOM05D007255 ORTHO05D009052 6.0e-23 110.9 105 57.1
EL10Ac5g10635 Beta vulgaris HOM05D007255 ORTHO05D009052 7.8e-23 110.5 104 56.7
Lj1A100G17 Lonicera japonica HOM05D007255 ORTHO05D009052 7.8e-23 110.5 72 72.2
MELO3C012737.2 Cucumis melo HOM05D007255 ORTHO05D009052 1.0e-22 110.2 73 72.6
Cc01_g16200 Coffea canephora HOM05D007255 ORTHO05D009052 1.3e-22 109.8 108 62.0
vmacro14695 Vaccinium macrocarpon HOM05D007255 ORTHO05D009052 2.3e-22 109.0 93 59.1
Actinidia23788 Actinidia chinensis HOM05D007255 ORTHO05D009052 3.0e-22 108.6 60 83.3
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 3.0e-22 108.6 102 59.8
Nn1g08274 Nelumbo nucifera HOM05D007255 ORTHO05D009052 3.0e-22 108.6 71 69.0
Hund02793 Selenicereus undatus HOM05D007255 ORTHO05D009052 3.9e-22 108.2 104 60.6
HanXRQChr01g0025051 Helianthus annuus HOM05D007255 ORTHO05D009052 6.6e-22 107.5 87 67.8
Aqoxy5G00040 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 8.6e-22 107.1 104 57.7
Solyc09g058990.3 Solanum lycopersicum HOM05D007255 ORTHO05D009052 1.1e-21 106.7 73 71.2
Sopen09g020080 Solanum pennellii HOM05D007255 ORTHO05D009052 1.9e-21 105.9 106 57.5
HPP92_024228 Vanilla planifolia HOM05D007255 ORTHO05D009052 2.5e-21 105.5 108 60.2
PSO170G5614 Papaver somniferum HOM05D007255 ORTHO05D009052 3.3e-21 105.1 74 67.6
PSO357G0536 Papaver somniferum HOM05D007255 ORTHO05D009052 3.3e-21 105.1 74 67.6
Sc05g0001760 Simmondsia chinensis HOM05D007255 ORTHO05D009052 5.6e-21 104.4 106 55.7
ATR0491G001 Amborella trichopoda HOM05D007255 ORTHO05D009052 3.1e-19 98.6 79 62.0
VMungo0251G0654 Vigna mungo HOM05D007255 ORTHO05D009052 8.9e-19 97.1 62 79.0
Zm00001eb241080 Zea mays HOM05D007255 ORTHO05D009052 1.2e-18 96.7 87 55.2
Prupe.8G191300 Prunus persica HOM05D007255 ORTHO05D009052 2.0e-18 95.9 91 54.9
Os02g0478500 Oryza sativa ssp. japonica HOM05D007255 ORTHO05D009052 3.4e-18 95.1 60 71.7
SEGI_09952 Sequoiadendron giganteum HOM05D007255 ORTHO05D009052 3.4e-18 95.1 72 63.9
Nn1g03664 Nelumbo nucifera HOM05D007255 ORTHO05D009052 8.3e-17 90.5 71 57.7
Peaxi162Scf00335g01514 Petunia axillaris HOM05D007255 ORTHO05D009052 7.1e-16 87.4 92 54.3
Aqoxy2G00044 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 3.3e-13 78.6 47 80.9
Psat0s4060g0280 Pisum sativum HOM05D007255 ORTHO05D009052 1.1e-08 63.5 69 55.1


User provided reference genes

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