Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 1.5e-81 306.2 169 100.0
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 1.7e-59 233.0 173 74.6
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 2.0e-49 199.5 171 66.7
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 2.3e-37 159.5 174 63.2
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 8.0e-30 134.4 174 49.4
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 2.0e-28 129.8 174 50.0
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 4.4e-28 128.6 178 47.2
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.7e-27 126.7 113 62.8
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 3.7e-27 125.6 113 62.8
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 8.3e-27 124.4 186 45.7
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 4.1e-26 122.1 190 43.7
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 7.0e-26 121.3 166 47.6
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 1.6e-25 120.2 169 46.7
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 4.6e-25 118.6 171 45.6
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 4.6e-25 118.6 191 42.9
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 6.0e-25 118.2 168 45.8
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 7.8e-25 117.9 113 59.3
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 7.8e-25 117.9 184 45.1
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 1.0e-24 117.5 179 51.4
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 1.3e-24 117.1 113 58.4
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 1.3e-24 117.1 174 47.7
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 8.6e-24 114.4 175 45.1
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.9e-23 113.2 112 60.7
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 3.3e-23 112.5 175 50.3
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 3.3e-23 112.5 174 45.4
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 7.3e-23 111.3 101 61.4
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.2e-22 110.5 172 48.3
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 2.1e-22 109.8 174 44.8
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 2.1e-22 109.8 197 39.6
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 2.8e-22 109.4 181 45.9
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 2.8e-22 109.4 190 45.8
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 2.8e-22 109.4 172 46.5
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 2.8e-22 109.4 171 46.8
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 2.8e-22 109.4 95 62.1
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 6.2e-22 108.2 174 45.4
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 1.4e-21 107.1 180 43.9
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 1.8e-21 106.7 181 42.5
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 2.3e-21 106.3 173 48.0
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 3.1e-21 105.9 179 40.8
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 5.2e-21 105.1 184 41.3
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 5.2e-21 105.1 184 41.3
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 6.8e-21 104.8 99 60.6
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 1.2e-20 104.0 109 56.0
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 1.5e-20 103.6 109 56.0
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 2.0e-20 103.2 184 40.8
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 2.0e-20 103.2 163 43.6
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 3.4e-20 102.4 181 43.1
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 3.4e-20 102.4 185 43.2
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 3.4e-20 102.4 173 49.1
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 7.5e-20 101.3 181 42.0
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 9.8e-20 100.9 129 49.6
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 2.2e-19 99.8 169 42.0
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 2.9e-19 99.4 185 45.4
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 3.7e-19 99.0 174 42.5
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 3.7e-19 99.0 175 41.7
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 8.3e-19 97.8 180 42.8
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 1.9e-18 96.7 181 40.9
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 2.4e-18 96.3 181 40.3
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 2.4e-18 96.3 182 44.0
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 2.4e-18 96.3 200 41.0
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 2.4e-18 96.3 179 44.1
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 3.2e-18 95.9 185 44.3
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 3.2e-18 95.9 200 41.0
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 4.1e-18 95.5 166 42.2
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 5.4e-18 95.1 183 42.1
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 7.0e-18 94.7 99 51.5
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 7.0e-18 94.7 164 43.3
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 7.0e-18 94.7 182 40.7
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 1.2e-17 94.0 99 51.5
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 1.2e-17 94.0 190 39.5
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 1.2e-17 94.0 186 43.5
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 1.6e-17 93.6 176 40.9
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 1.6e-17 93.6 181 40.9
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 2.1e-17 93.2 171 43.3
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 3.5e-17 92.4 174 40.2
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 4.6e-17 92.0 200 39.5
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 6.0e-17 91.7 175 42.3
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 7.8e-17 91.3 172 40.7
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 2.3e-16 89.7 183 39.9
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 3.0e-16 89.4 179 40.8
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 3.0e-16 89.4 182 40.1
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 5.1e-16 88.6 176 40.9
arahy.Tifrunner.gnm1.ann1.DAY3RM Arachis hypogaea HOM05D006672 ORTHO05D007769 6.6e-16 88.2 113 47.8
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 8.6e-16 87.8 154 42.9
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 8.6e-16 87.8 177 46.9
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 8.6e-16 87.8 196 37.8
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 1.1e-15 87.4 174 40.2
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 1.9e-15 86.7 187 40.6
arahy.Tifrunner.gnm1.ann1.XTGM9Z Arachis hypogaea HOM05D006672 ORTHO05D007769 3.3e-15 85.9 100 54.0
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 2.8e-14 82.8 156 42.3
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 4.7e-14 82.0 168 39.9
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 4.7e-14 82.0 167 40.7
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 1.8e-13 80.1 104 47.1
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 2.3e-13 79.7 173 37.6
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 8.9e-13 77.8 189 37.0
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 2.6e-12 76.3 105 52.4
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 4.4e-12 75.5 108 50.0
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 7.5e-12 74.7 119 47.1
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 7.5e-12 74.7 173 37.6
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 6.4e-11 71.6 133 39.8
HPP92_005483 Vanilla planifolia HOM05D006672 ORTHO05D007769 3.2e-10 69.3 110 44.5
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 9.2e-10 67.8 101 44.6
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 1.6e-09 67.0 177 37.3
Sc15g0001280 Simmondsia chinensis HOM05D006672 ORTHO05D007769 3.5e-09 65.9 177 31.1
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 1.0e-08 64.3 180 39.4
CSS0037944 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 2.3e-08 63.2 107 44.9
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 2.3e-08 63.2 180 35.6
Atru.chr1.3332 Acer truncatum HOM05D006672 ORTHO05D007769 3.9e-08 62.4 141 37.6
Zm00001eb098380 Zea mays HOM05D006672 ORTHO05D007769 3.9e-08 62.4 101 46.5
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 4.7e-06 55.5 158 38.0
Pp3c1_40010 Physcomitrium patens HOM05D006672 ORTHO05D007769 4.7e-06 55.5 160 34.4
PGR102G0682 Punica granatum HOM05D006672 ORTHO05D007769 6.2e-06 55.1 116 38.8
FvH4_6g22601 Fragaria vesca HOM05D017723 ORTHO05D035582 8.1e-06 54.7 87 44.8
Rhsim06G0080600 Rhododendron simsii HOM05D006672 ORTHO05D007769 8.1e-06 54.7 70 47.1


User provided reference genes

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