Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0331G0161 Vigna mungo HOM05D003555 ORTHO05D004542 4.5e-77 291.2 148 100.0
VMungo1383G1114 Vigna mungo HOM05D003555 ORTHO05D004542 3.5e-29 132.1 70 92.9
VMungo0464G1180 Vigna mungo HOM05D003555 ORTHO05D004542 2.3e-28 129.4 74 86.5
Glyma.19G101000 Glycine max HOM05D003555 ORTHO05D004542 5.0e-28 128.3 70 88.6
Lalb_Chr14g0363981 Lupinus albus HOM05D003555 ORTHO05D004542 1.1e-27 127.1 70 87.1
Glyma.16G050200 Glycine max HOM05D003555 ORTHO05D004542 1.5e-27 126.7 70 85.7
Lalb_Chr24g0403201 Lupinus albus HOM05D003555 ORTHO05D004542 1.9e-27 126.3 70 87.1
Phvul.001G086700 Phaseolus vulgaris HOM05D003555 ORTHO05D004542 1.9e-27 126.3 70 88.6
MD09G1004500 Malus domestica HOM05D003555 ORTHO05D004542 7.3e-27 124.4 70 85.7
MD17G1008500 Malus domestica HOM05D003555 ORTHO05D004542 7.3e-27 124.4 70 85.7
Prupe.3G312200 Prunus persica HOM05D003555 ORTHO05D004542 7.3e-27 124.4 70 85.7
Glyma.16G146600 Glycine max HOM05D003555 ORTHO05D004542 1.6e-26 123.2 70 85.7
PSO478G0165 Papaver somniferum HOM05D003555 ORTHO05D004542 1.6e-26 123.2 71 84.5
Cfa007176 Carpinus fangiana HOM05D003555 ORTHO05D004542 2.8e-26 122.5 70 84.3
CiPaw.04G001900 Carya illinoinensis HOM05D003555 ORTHO05D004542 2.8e-26 122.5 70 82.9
RcHm_v2.0_Chr2g0176361 Rosa chinensis HOM05D003555 ORTHO05D004542 2.8e-26 122.5 70 85.7
SalBow1G4818 Salvia bowleyana HOM05D003555 ORTHO05D004542 2.8e-26 122.5 99 63.6
Sc13g0008590 Simmondsia chinensis HOM05D003555 ORTHO05D004542 2.8e-26 122.5 70 84.3
Manes.04G091900 Manihot esculenta HOM05D003555 ORTHO05D004542 3.6e-26 122.1 70 82.9
arahy.Tifrunner.gnm1.ann1.HQ0MCX Arachis hypogaea HOM05D003555 ORTHO05D004542 4.7e-26 121.7 70 82.9
arahy.Tifrunner.gnm1.ann1.N4MBCZ Arachis hypogaea HOM05D003555 ORTHO05D004542 4.7e-26 121.7 70 82.9
MBI07_g40357_MAGBIO Magnolia biondii HOM05D003555 ORTHO05D004542 4.7e-26 121.7 70 82.9
PGR083G2609 Punica granatum HOM05D003555 ORTHO05D004542 4.7e-26 121.7 98 65.3
Sc25g0000460 Simmondsia chinensis HOM05D003555 ORTHO05D004542 4.7e-26 121.7 69 84.1
TPR.G17457 Trifolium pratense HOM05D003555 ORTHO05D004542 4.7e-26 121.7 98 66.3
TWI34G1938 Tripterygium wilfordii HOM05D003555 ORTHO05D004542 4.7e-26 121.7 71 83.1
Dinv23202 Davidia involucrata HOM05D003555 ORTHO05D004542 6.2e-26 121.3 70 82.9
Glyma.02G065500 Glycine max HOM05D003555 ORTHO05D004542 6.2e-26 121.3 70 84.3
Manes.11G078200 Manihot esculenta HOM05D003555 ORTHO05D004542 6.2e-26 121.3 68 83.8
AUR62015995 Chenopodium quinoa HOM05D003555 ORTHO05D004542 8.0e-26 120.9 70 82.9
FvH4_6g54180 Fragaria vesca HOM05D003555 ORTHO05D004542 8.0e-26 120.9 70 81.4
FAN09G3428 Fragaria x ananassa HOM05D003555 ORTHO05D004542 8.0e-26 120.9 70 81.4
FAN14G0379 Fragaria x ananassa HOM05D003555 ORTHO05D004542 8.0e-26 120.9 70 81.4
TAR622G0101 Trochodendron aralioides HOM05D003555 ORTHO05D004542 8.0e-26 120.9 70 82.9
Haze_14935 Corylus avellana HOM05D003555 ORTHO05D004542 1.1e-25 120.6 70 82.9
Sabra16G0204700 Salix brachista HOM05D003555 ORTHO05D004542 1.1e-25 120.6 68 82.4
THA.LOC104805306 Tarenaya hassleriana HOM05D003555 ORTHO05D004542 1.1e-25 120.6 68 83.8
Atru.chr6.2636 Acer truncatum HOM05D003555 ORTHO05D004542 1.4e-25 120.2 70 81.4
CANSAT64G0789 Cannabis sativa HOM05D003555 ORTHO05D004542 1.4e-25 120.2 70 82.9
Cpa.g.sc70.83 Carica papaya HOM05D003555 ORTHO05D004542 1.4e-25 120.2 70 81.4
CDE05G1333 Ceratophyllum demersum HOM05D003555 ORTHO05D004542 1.4e-25 120.2 96 61.5
FAN02G1454 Fragaria x ananassa HOM05D003555 ORTHO05D004542 1.4e-25 120.2 70 81.4
QL02p062748 Quercus lobata HOM05D003555 ORTHO05D004542 1.4e-25 120.2 70 82.9
TWI60G1549 Tripterygium wilfordii HOM05D003555 ORTHO05D004542 1.4e-25 120.2 68 82.4
Thecc.04G045300 Theobroma cacao HOM05D003555 ORTHO05D004542 1.8e-25 119.8 70 80.0
DCAR_021412 Daucus carota HOM05D003555 ORTHO05D004542 2.3e-25 119.4 97 67.0
Dinv11219 Davidia involucrata HOM05D003555 ORTHO05D004542 2.3e-25 119.4 70 81.4
MBI11_g08158_MAGBIO Magnolia biondii HOM05D003555 ORTHO05D004542 2.3e-25 119.4 70 80.0
VMungo0464G0001 Vigna mungo HOM05D003555 ORTHO05D004542 2.3e-25 119.4 71 80.3
CDE05G2896 Ceratophyllum demersum HOM05D003555 ORTHO05D004542 3.1e-25 119.0 68 80.9
Duzib264G0281 Durio zibethinus HOM05D003555 ORTHO05D004542 3.1e-25 119.0 70 80.0
Eucgr.G01949 Eucalyptus grandis HOM05D003555 ORTHO05D004542 3.1e-25 119.0 70 82.9
Lj1g0000762 Lotus japonicus HOM05D003555 ORTHO05D004542 3.1e-25 119.0 70 82.9
Potri.017G061100 Populus trichocarpa HOM05D003555 ORTHO05D004542 3.1e-25 119.0 70 81.4
THA.LOC104823995 Tarenaya hassleriana HOM05D003555 ORTHO05D004542 3.1e-25 119.0 68 82.4
THA.LOC104825653 Tarenaya hassleriana HOM05D003555 ORTHO05D004542 3.1e-25 119.0 68 82.4
TAR374G1733 Trochodendron aralioides HOM05D003555 ORTHO05D004542 3.1e-25 119.0 70 81.4
TAR629G2425 Trochodendron aralioides HOM05D003555 ORTHO05D004542 3.1e-25 119.0 70 82.9
unitig_61.g26203 Utricularia gibba HOM05D003555 ORTHO05D004542 3.1e-25 119.0 71 80.3
CSS0013918 Camellia sinensis var. sinensis HOM05D003555 ORTHO05D004542 5.2e-25 118.2 70 80.0
CSS0044185 Camellia sinensis var. sinensis HOM05D003555 ORTHO05D004542 5.2e-25 118.2 70 80.0
ClCG01G008140 Citrullus lanatus HOM05D003555 ORTHO05D004542 5.2e-25 118.2 70 82.9
DCAR_016355 Daucus carota HOM05D003555 ORTHO05D004542 5.2e-25 118.2 70 78.6
Duzib187G1504 Durio zibethinus HOM05D003555 ORTHO05D004542 5.2e-25 118.2 70 78.6
FAN05G2121 Fragaria x ananassa HOM05D003555 ORTHO05D004542 5.2e-25 118.2 70 80.0
Gohir.A05G334700 Gossypium hirsutum HOM05D003555 ORTHO05D004542 5.2e-25 118.2 70 78.6
Actinidia36835 Actinidia chinensis HOM05D003555 ORTHO05D004542 6.8e-25 117.9 70 81.4
Eucgr.G01943 Eucalyptus grandis HOM05D003555 ORTHO05D004542 6.8e-25 117.9 70 81.4
Hma1.2p1_1187F.1_g265130 Hydrangea macrophylla HOM05D003555 ORTHO05D004542 6.8e-25 117.9 70 81.4
Hma1.2p1_1187F.1_g265140 Hydrangea macrophylla HOM05D003555 ORTHO05D004542 6.8e-25 117.9 70 81.4
Hund04735 Selenicereus undatus HOM05D003555 ORTHO05D004542 6.8e-25 117.9 71 77.5
SGA_v2.0_scaffold14G07035 Striga asiatica HOM05D003555 ORTHO05D004542 6.8e-25 117.9 98 62.2
Migut.D01225 Erythranthe guttata HOM05D003555 ORTHO05D004542 8.9e-25 117.5 70 81.4
Psat0s1497g0040 Pisum sativum HOM05D003555 ORTHO05D004542 8.9e-25 117.5 98 63.3
Rhsim08G0195300 Rhododendron simsii HOM05D003555 ORTHO05D004542 8.9e-25 117.5 71 81.7
HPP92_022913 Vanilla planifolia HOM05D003555 ORTHO05D004542 8.9e-25 117.5 98 62.2
Ah.07g207280 Amaranthus hybridus HOM05D003555 ORTHO05D004542 1.2e-24 117.1 70 80.0
MSTRG.22881 Avicennia marina HOM05D003555 ORTHO05D004542 1.2e-24 117.1 71 77.5
Sed0000891 Sechium edule HOM05D003555 ORTHO05D004542 1.2e-24 117.1 70 81.4
vmacro19161 Vaccinium macrocarpon HOM05D003555 ORTHO05D004542 1.2e-24 117.1 71 80.3
GSVIVG01033006001 Vitis vinifera HOM05D003555 ORTHO05D004542 1.2e-24 117.1 70 80.0
AL1G24480 Arabidopsis lyrata HOM05D003555 ORTHO05D004542 1.5e-24 116.7 70 78.6
AT1G12840 Arabidopsis thaliana HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
BcaB03g13163 Brassica carinata HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
BcaC05g25110 Brassica carinata HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
BcaC05g25150 Brassica carinata HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
BcaC07g40270 Brassica carinata HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
BcaC07g41676 Brassica carinata HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
A06p08830 Brassica napus HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
A08p32590 Brassica napus HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
A09p63580 Brassica napus HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
C05p10440 Brassica napus HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
C08p15700 Brassica napus HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
C08p33730 Brassica napus HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
C08p47080 Brassica napus HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
BolC5t29790H Brassica oleracea HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
BolC8t49197H Brassica oleracea HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
BolC8t50972H Brassica oleracea HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
BolC8t52247H Brassica oleracea HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
BraA06t24078Z Brassica rapa HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
BraA08t35183Z Brassica rapa HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
BraA09t41708Z Brassica rapa HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
CARHR013160 Cardamine hirsuta HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
Cc05_g01690 Coffea canephora HOM05D003555 ORTHO05D004542 1.5e-24 116.7 70 78.6
MELO3C025061.2 Cucumis melo HOM05D003555 ORTHO05D004542 1.5e-24 116.7 70 81.4
CsaV3_5G020170 Cucumis sativus L. HOM05D003555 ORTHO05D004542 1.5e-24 116.7 70 81.4
Thhalv10007948m.g Eutrema salsugineum HOM05D003555 ORTHO05D004542 1.5e-24 116.7 68 80.9
Gohir.D04G073600 Gossypium hirsutum HOM05D003555 ORTHO05D004542 1.5e-24 116.7 70 77.1
Actinidia18318 Actinidia chinensis HOM05D003555 ORTHO05D004542 2.0e-24 116.3 70 81.4
ATR0582G027 Amborella trichopoda HOM05D003555 ORTHO05D004542 2.0e-24 116.3 70 77.1
BcaB08g34247 Brassica carinata HOM05D003555 ORTHO05D004542 2.0e-24 116.3 68 80.9
Ciclev10015638m.g Citrus clementina HOM05D003555 ORTHO05D004542 2.0e-24 116.3 70 77.1
COL.COLO4_13344 Corchorus olitorius HOM05D003555 ORTHO05D004542 2.0e-24 116.3 69 79.7
Duzib147G0304 Durio zibethinus HOM05D003555 ORTHO05D004542 2.0e-24 116.3 70 77.1
Nitab4.5_0005207g0040 Nicotiana tabacum HOM05D003555 ORTHO05D004542 2.0e-24 116.3 71 80.3
Sp1g11410 Schrenkiella parvula HOM05D003555 ORTHO05D004542 2.0e-24 116.3 69 79.7
Zm00001eb163710 Zea mays HOM05D003555 ORTHO05D004542 2.0e-24 116.3 70 77.1
COL.COLO4_10540 Corchorus olitorius HOM05D003555 ORTHO05D004542 2.6e-24 115.9 70 78.6
Medtr7g083720 Medicago truncatula HOM05D003555 ORTHO05D004542 2.6e-24 115.9 98 63.3
Sed0008328 Sechium edule HOM05D003555 ORTHO05D004542 2.6e-24 115.9 70 81.4
Gohir.D11G067700 Gossypium hirsutum HOM05D003555 ORTHO05D004542 3.4e-24 115.5 70 78.6
Gorai.007G072500 Gossypium raimondii HOM05D003555 ORTHO05D004542 3.4e-24 115.5 70 78.6
Os05g0593100 Oryza sativa ssp. japonica HOM05D003555 ORTHO05D004542 3.4e-24 115.5 70 75.7
Potri.001G322500 Populus trichocarpa HOM05D003555 ORTHO05D004542 3.4e-24 115.5 70 77.1
Actinidia25536 Actinidia chinensis HOM05D003555 ORTHO05D004542 4.4e-24 115.2 70 80.0
EL10Ac3g05664 Beta vulgaris HOM05D003555 ORTHO05D004542 4.4e-24 115.2 70 77.1
Ca_08125_v3 Cicer arietinum L. HOM05D003555 ORTHO05D004542 4.4e-24 115.2 98 63.3
Oeu058121.1 Olea europaea HOM05D003555 ORTHO05D004542 4.4e-24 115.2 69 79.7
Phvul.004G070900 Phaseolus vulgaris HOM05D003555 ORTHO05D004542 4.4e-24 115.2 70 81.4
Carub.0001s1258 Capsella rubella HOM05D003555 ORTHO05D004542 5.8e-24 114.8 68 80.9
Nn5g27103 Nelumbo nucifera HOM05D003555 ORTHO05D004542 5.8e-24 114.8 68 79.4
Solyc03g097800.4 Solanum lycopersicum HOM05D003555 ORTHO05D004542 5.8e-24 114.8 71 80.3
Sopen03g028540 Solanum pennellii HOM05D003555 ORTHO05D004542 5.8e-24 114.8 71 80.3
GSVIVG01008626001 Vitis vinifera HOM05D003555 ORTHO05D004542 5.8e-24 114.8 70 80.0
Nitab4.5_0007858g0030 Nicotiana tabacum HOM05D003555 ORTHO05D004542 7.5e-24 114.4 71 78.9
Zm00001eb297260 Zea mays HOM05D003555 ORTHO05D004542 9.8e-24 114.0 70 75.7
MSTRG.11256 Avicennia marina HOM05D003555 ORTHO05D004542 1.3e-23 113.6 98 58.2
ECA232G4336 Erigeron canadensis HOM05D003555 ORTHO05D004542 1.3e-23 113.6 98 59.2
CAN.G637.54 Capsicum annuum HOM05D003555 ORTHO05D004542 1.7e-23 113.2 71 78.9
Gohir.A11G063400 Gossypium hirsutum HOM05D003555 ORTHO05D004542 1.7e-23 113.2 70 77.1
CAN.G257.127 Capsicum annuum HOM05D003555 ORTHO05D004542 2.2e-23 112.8 100 63.0
Gorai.012G082900 Gossypium raimondii HOM05D003555 ORTHO05D004542 2.2e-23 112.8 70 75.7
Zm00001eb345260 Zea mays HOM05D003555 ORTHO05D004542 2.2e-23 112.8 70 74.3
Lj5A90G23 Lonicera japonica HOM05D003555 ORTHO05D004542 2.9e-23 112.5 70 75.7
Peaxi162Scf00171g01130 Petunia axillaris HOM05D003555 ORTHO05D004542 2.9e-23 112.5 71 77.5
Sabra17G0054300 Salix brachista HOM05D003555 ORTHO05D004542 3.7e-23 112.1 70 75.7
Nn4g22182 Nelumbo nucifera HOM05D003555 ORTHO05D004542 4.9e-23 111.7 70 74.3
Ah.13g068520 Amaranthus hybridus HOM05D003555 ORTHO05D004542 8.3e-23 110.9 70 75.7
Lsat_1_v5_gn_4_84120 Lactuca sativa HOM05D003555 ORTHO05D004542 8.3e-23 110.9 69 72.5
Actinidia08900 Actinidia chinensis HOM05D003555 ORTHO05D004542 1.4e-22 110.2 70 75.7
HanXRQChr16g0528421 Helianthus annuus HOM05D003555 ORTHO05D004542 1.4e-22 110.2 70 71.4
Lsat_1_v5_gn_4_84140 Lactuca sativa HOM05D003555 ORTHO05D004542 1.9e-22 109.8 70 71.4
Lsat_1_v5_gn_6_50360 Lactuca sativa HOM05D003555 ORTHO05D004542 1.9e-22 109.8 70 71.4
Hund11754 Selenicereus undatus HOM05D003555 ORTHO05D004542 1.9e-22 109.8 70 75.7
Aa31LG1G1920 Aethionema arabicum HOM05D003555 ORTHO05D004542 4.1e-22 108.6 68 75.0
SEGI_35214 Sequoiadendron giganteum HOM05D003555 ORTHO05D004542 5.4e-22 108.2 68 73.5
Mapoly0126s0013 Marchantia polymorpha HOM05D003555 ORTHO05D004542 3.0e-20 102.4 69 68.1
CSS0036109 Camellia sinensis var. sinensis HOM05D003555 ORTHO05D004542 5.1e-20 101.7 59 81.4
SMO200G0006 Selaginella moellendorffii HOM05D003555 ORTHO05D004542 2.5e-19 99.4 68 64.7
AUR62021202 Chenopodium quinoa HOM05D003555 ORTHO05D004542 2.8e-18 95.9 67 74.6
Pp3c13_14220 Physcomitrium patens HOM05D003555 ORTHO05D004542 2.3e-17 92.8 70 64.3
RcHm_v2.0_Chr5g0048981 Rosa chinensis HOM05D003555 ORTHO05D004542 1.5e-16 90.1 62 72.6
VMungo0251G2278 Vigna mungo HOM05D003555 ORTHO05D001686 2.6e-16 89.4 46 91.3
AagrBONN_evm.TU.Sc2ySwM_228.2553 Anthoceros agrestis HOM05D003555 ORTHO05D004542 5.8e-16 88.2 71 59.2
Lj9A484G61 Lonicera japonica HOM05D003555 ORTHO05D004542 1.2e-13 80.5 52 73.1
Pp3c9_8980 Physcomitrium patens HOM05D003555 ORTHO05D004542 4.6e-13 78.6 68 54.4
Nn3g16313 Nelumbo nucifera HOM05D003555 ORTHO05D004542 7.8e-13 77.8 45 77.8
MCO15G152 Micromonas commoda HOM05D003555 ORTHO05D004542 3.6e-10 68.9 69 50.7
PRCOL_00003348 Prasinoderma coloniale HOM05D003555 ORTHO05D004542 3.6e-10 68.9 81 43.2
ECA246G0182 Erigeron canadensis HOM05D003555 ORTHO05D004542 6.2e-10 68.2 44 68.2
Hma1.2p1_0403F.1_g145240 Hydrangea macrophylla HOM05D003555 ORTHO05D004542 2.4e-09 66.2 48 68.8
Cre06.g250250 Chlamydomonas reinhardtii HOM05D003555 ORTHO05D004542 1.5e-08 63.5 72 41.7


User provided reference genes

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