Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 4.9e-310 1067.0 551 100.0
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.2e-244 849.7 502 88.6
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 5.5e-221 771.2 490 78.2
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 1.9e-189 666.4 513 69.0
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 1.6e-183 646.7 509 68.0
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 2.7e-175 619.4 513 63.9
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 8.6e-174 614.4 513 61.4
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 4.3e-173 612.1 493 64.3
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 2.0e-170 603.2 493 63.7
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 6.0e-167 591.7 495 62.8
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 5.6e-165 585.1 515 60.8
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 7.8e-159 564.7 512 58.0
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 3.9e-158 562.4 512 57.8
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 3.1e-155 552.7 496 60.5
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 1.1e-149 534.3 512 55.3
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 4.8e-148 528.9 512 52.9
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 1.1e-147 527.7 511 56.4
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 3.4e-146 522.7 511 53.8
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 2.9e-145 519.6 511 53.4
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 1.1e-144 517.7 512 53.5
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 4.2e-144 515.8 511 52.8
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 1.8e-142 510.4 496 54.8
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 4.0e-139 499.2 513 51.7
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 5.3e-139 498.8 493 54.6
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 5.3e-139 498.8 514 53.1
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 4.5e-138 495.7 517 49.5
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 7.6e-138 495.0 513 51.5
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 1.7e-137 493.8 514 52.1
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 2.2e-137 493.4 513 55.0
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 1.9e-136 490.3 513 49.9
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 7.9e-135 485.0 508 50.6
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 3.0e-134 483.0 514 52.9
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 3.9e-134 482.6 513 50.3
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 3.9e-134 482.6 514 52.9
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 3.3e-133 479.6 503 51.3
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 7.4e-133 478.4 516 53.1
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 9.7e-133 478.0 496 54.8
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 2.8e-132 476.5 517 53.0
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 2.8e-132 476.5 517 53.0
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 2.4e-131 473.4 514 52.3
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 4.5e-130 469.2 493 52.7
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 7.6e-130 468.4 493 52.1
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 1.0e-129 468.0 523 49.3
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 6.5e-129 465.3 493 51.3
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 8.5e-129 464.9 510 50.6
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 1.4e-128 464.2 507 49.3
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 7.2e-128 461.8 508 47.2
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 3.6e-127 459.5 503 48.7
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 4.6e-127 459.1 508 48.2
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 3.0e-126 456.4 515 48.7
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 1.1e-125 454.5 498 51.2
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 3.3e-125 453.0 516 48.3
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 5.7e-125 452.2 512 47.3
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 7.4e-125 451.8 514 50.2
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 1.6e-124 450.7 437 52.2
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 3.7e-124 449.5 512 47.1
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 4.8e-124 449.1 494 51.8
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 1.1e-123 448.0 529 47.1
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 1.4e-123 447.6 513 51.7
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 6.9e-123 445.3 512 49.8
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 6.9e-123 445.3 496 52.0
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 9.1e-123 444.9 516 47.9
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 2.0e-122 443.7 513 46.0
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 2.2e-121 440.3 511 47.9
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 7.2e-120 435.3 511 48.1
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 9.4e-120 434.9 493 49.1
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 2.7e-119 433.3 516 49.6
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 5.1e-118 429.1 519 44.1
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 1.1e-117 427.9 509 50.5
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 1.5e-117 427.6 515 44.3
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 6.3e-116 422.2 512 49.4
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 6.3e-116 422.2 520 47.1
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 4.1e-115 419.5 511 50.3
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 5.3e-115 419.1 515 49.3
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 5.3e-115 419.1 511 48.1
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 5.3e-115 419.1 516 49.2
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 1.2e-114 417.9 514 48.6
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 3.4e-114 416.4 513 49.1
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 3.8e-113 412.9 501 46.7
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 5.0e-113 412.5 512 49.0
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 5.0e-113 412.5 515 49.1
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 1.1e-112 411.4 514 48.8
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 1.4e-110 404.4 532 46.6
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 1.5e-109 401.0 493 45.6
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 5.7e-109 399.1 509 47.7
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 2.8e-108 396.7 494 49.2
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 7.0e-107 392.1 514 44.7
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 5.9e-106 389.0 392 53.3
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 1.2e-103 381.3 491 45.4
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 4.0e-102 376.3 490 45.3
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 2.2e-100 370.5 412 50.5
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 7.0e-99 365.5 494 43.7
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 2.9e-97 360.1 508 45.3
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 1.2e-95 354.8 509 43.2
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 1.2e-95 354.8 341 52.5
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 1.1e-91 341.7 464 44.0
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 5.0e-89 332.8 463 47.5
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 2.1e-87 327.4 525 40.4
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 8.3e-84 315.5 332 48.2
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 1.5e-77 294.7 270 55.6
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 2.9e-76 290.4 374 43.6
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 1.4e-70 271.6 330 49.1
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 3.0e-65 253.8 344 43.0
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 2.1e-63 247.7 216 56.5
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 8.1e-63 245.7 173 64.7
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 8.1e-63 245.7 173 64.7
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 2.5e-56 224.2 532 32.1
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 1.8e-54 218.0 157 61.8
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 1.8e-54 218.0 513 32.4
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 1.9e-51 208.0 394 30.2
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.6e-50 204.9 119 84.9
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 3.3e-40 170.6 392 29.1
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 2.3e-33 147.9 270 30.0
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 1.6e-26 125.2 193 46.6
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-20 105.5 170 48.2
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 1.4e-19 102.1 173 33.5
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 4.2e-19 100.5 143 39.9
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 7.1e-19 99.8 116 43.1
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 1.2e-18 99.0 116 41.4
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 7.9e-18 96.3 143 39.2
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 6.7e-17 93.2 116 39.7
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 2.2e-15 88.2 219 28.8
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 3.3e-08 64.3 120 31.7


User provided reference genes

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