Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0251G2804 Vigna mungo HOM05D005570 ORTHO05D007368 4.9e-88 327.8 168 100.0
Phvul.002G100000 Phaseolus vulgaris HOM05D005570 ORTHO05D007368 5.6e-84 314.3 168 94.6
Glyma.07G223300 Glycine max HOM05D005570 ORTHO05D007368 5.3e-74 281.2 168 83.9
Ca_18776_v3 Cicer arietinum L. HOM05D005570 ORTHO05D007368 1.6e-70 269.6 168 79.2
Lj1g0005707 Lotus japonicus HOM05D005570 ORTHO05D007368 1.0e-69 266.9 169 81.1
Psat7g132520 Pisum sativum HOM05D005570 ORTHO05D007368 1.3e-67 260.0 163 79.1
Medtr4g083580 Medicago truncatula HOM05D005570 ORTHO05D007368 1.1e-66 256.9 170 78.2
Lalb_Chr09g0328771 Lupinus albus HOM05D005570 ORTHO05D007368 2.6e-65 252.3 169 74.6
TPR.G11531 Trifolium pratense HOM05D005570 ORTHO05D007368 1.9e-63 246.1 168 74.4
arahy.Tifrunner.gnm1.ann1.66C0B7 Arachis hypogaea HOM05D005570 ORTHO05D007368 5.5e-63 244.6 166 72.9
arahy.Tifrunner.gnm1.ann1.TWVE3E Arachis hypogaea HOM05D005570 ORTHO05D007368 5.5e-63 244.6 166 72.9
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 7.9e-62 240.7 164 72.6
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 6.7e-61 237.7 164 73.2
TWI18G0239 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 2.0e-57 226.1 162 71.6
CiPaw.01G284700 Carya illinoinensis HOM05D005570 ORTHO05D007368 5.5e-55 218.0 160 68.1
Sc21g0000460 Simmondsia chinensis HOM05D005570 ORTHO05D007368 7.2e-55 217.6 162 68.5
GSVIVG01018573001 Vitis vinifera HOM05D005570 ORTHO05D007368 7.9e-54 214.2 162 69.8
Peaxi162Scf00612g00133 Petunia axillaris HOM05D005570 ORTHO05D007368 1.0e-53 213.8 164 66.5
Cfa018716 Carpinus fangiana HOM05D005570 ORTHO05D007368 1.4e-53 213.4 162 66.0
Hma1.2p1_0599F.1_g187020 Hydrangea macrophylla HOM05D005570 ORTHO05D007368 1.4e-53 213.4 162 68.5
HanXRQChr03g0075001 Helianthus annuus HOM05D005570 ORTHO05D007368 3.0e-53 212.2 163 66.9
CSS0001120 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 8.8e-53 210.7 162 66.0
CsaV3_1G000130 Cucumis sativus L. HOM05D005570 ORTHO05D007368 1.1e-52 210.3 159 67.3
Gohir.D01G037900 Gossypium hirsutum HOM05D005570 ORTHO05D007368 1.1e-52 210.3 159 67.9
Gorai.002G046300 Gossypium raimondii HOM05D005570 ORTHO05D007368 1.1e-52 210.3 159 67.9
MSTRG.12255 Avicennia marina HOM05D005570 ORTHO05D007368 1.5e-52 209.9 163 66.9
AUR62019308 Chenopodium quinoa HOM05D005570 ORTHO05D007368 1.5e-52 209.9 158 67.7
Haze_07109 Corylus avellana HOM05D005570 ORTHO05D007368 2.5e-52 209.1 162 64.8
Lj9C217G3 Lonicera japonica HOM05D005570 ORTHO05D007368 2.5e-52 209.1 164 65.2
AUR62000128 Chenopodium quinoa HOM05D005570 ORTHO05D007368 3.3e-52 208.8 162 66.7
Duzib213G1053 Durio zibethinus HOM05D005570 ORTHO05D007368 3.3e-52 208.8 157 66.9
MD06G1132000 Malus domestica HOM05D005570 ORTHO05D007368 5.7e-52 208.0 163 67.5
Gohir.A01G047200 Gossypium hirsutum HOM05D005570 ORTHO05D007368 7.4e-52 207.6 159 67.3
Rhsim04G0030600 Rhododendron simsii HOM05D005570 ORTHO05D007368 7.4e-52 207.6 162 66.0
Thecc.07G134300 Theobroma cacao HOM05D005570 ORTHO05D007368 9.7e-52 207.2 154 68.8
ClCG06G018310 Citrullus lanatus HOM05D005570 ORTHO05D007368 1.3e-51 206.8 161 64.6
COL.COLO4_17467 Corchorus olitorius HOM05D005570 ORTHO05D007368 1.7e-51 206.5 158 66.5
Sed0027705 Sechium edule HOM05D005570 ORTHO05D007368 1.7e-51 206.5 161 65.2
Carub.0003s2602 Capsella rubella HOM05D005570 ORTHO05D007368 2.2e-51 206.1 162 63.6
MD14G1148400 Malus domestica HOM05D005570 ORTHO05D007368 2.2e-51 206.1 163 66.3
Manes.13G060500 Manihot esculenta HOM05D005570 ORTHO05D007368 2.2e-51 206.1 160 65.6
TPR.G34081 Trifolium pratense HOM05D005570 ORTHO05D007368 2.2e-51 206.1 139 74.8
CSS0020937 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 2.8e-51 205.7 162 64.8
Solyc07g042710.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 4.8e-51 204.9 163 63.8
Sopen07g023810 Solanum pennellii HOM05D005570 ORTHO05D007368 4.8e-51 204.9 163 63.8
AT2G04340 Arabidopsis thaliana HOM05D005570 ORTHO05D007368 8.2e-51 204.1 162 62.3
Ciclev10016955m.g Citrus clementina HOM05D005570 ORTHO05D007368 8.2e-51 204.1 160 64.4
Sabra14G0129400 Salix brachista HOM05D005570 ORTHO05D007368 8.2e-51 204.1 161 66.5
Aa31LG7G6130 Aethionema arabicum HOM05D005570 ORTHO05D007368 1.1e-50 203.8 154 64.9
Lsat_1_v5_gn_9_102501 Lactuca sativa HOM05D005570 ORTHO05D007368 1.1e-50 203.8 163 64.4
Potri.014G169500 Populus trichocarpa HOM05D005570 ORTHO05D007368 1.1e-50 203.8 162 66.7
Nitab4.5_0005376g0020 Nicotiana tabacum HOM05D005570 ORTHO05D007368 1.8e-50 203.0 162 63.0
BcaB06g26780 Brassica carinata HOM05D005570 ORTHO05D007368 3.1e-50 202.2 163 63.2
Sp3g23170 Schrenkiella parvula HOM05D005570 ORTHO05D007368 3.1e-50 202.2 162 62.3
Prupe.5G143000 Prunus persica HOM05D005570 ORTHO05D007368 4.1e-50 201.8 163 65.0
TAR374G1095 Trochodendron aralioides HOM05D005570 ORTHO05D007368 4.1e-50 201.8 154 66.9
A07p06720 Brassica napus HOM05D005570 ORTHO05D007368 5.3e-50 201.4 151 65.6
BraA07t28466Z Brassica rapa HOM05D005570 ORTHO05D007368 5.3e-50 201.4 165 61.2
BcaC06g35864 Brassica carinata HOM05D005570 ORTHO05D007368 6.9e-50 201.1 162 62.3
C07p10300 Brassica napus HOM05D005570 ORTHO05D007368 6.9e-50 201.1 162 62.3
BolC7t41480H Brassica oleracea HOM05D005570 ORTHO05D007368 6.9e-50 201.1 162 62.3
Actinidia07853 Actinidia chinensis HOM05D005570 ORTHO05D007368 1.2e-49 200.3 154 67.5
Eucgr.K01395 Eucalyptus grandis HOM05D005570 ORTHO05D007368 1.2e-49 200.3 154 64.9
Thhalv10002687m.g Eutrema salsugineum HOM05D005570 ORTHO05D007368 1.2e-49 200.3 162 61.7
Atru.chr6.3424 Acer truncatum HOM05D005570 ORTHO05D007368 1.5e-49 199.9 160 65.6
Nitab4.5_0005354g0010 Nicotiana tabacum HOM05D005570 ORTHO05D007368 1.5e-49 199.9 162 61.7
PGR031G1532 Punica granatum HOM05D005570 ORTHO05D007368 1.5e-49 199.9 144 70.1
PGR044G2338 Punica granatum HOM05D005570 ORTHO05D007368 1.5e-49 199.9 144 70.1
Nn4g22113 Nelumbo nucifera HOM05D005570 ORTHO05D007368 2.6e-49 199.1 154 64.3
PSO357G0372 Papaver somniferum HOM05D005570 ORTHO05D007368 2.6e-49 199.1 162 61.1
RcHm_v2.0_Chr7g0188821 Rosa chinensis HOM05D005570 ORTHO05D007368 2.6e-49 199.1 163 65.0
CARHR102200 Cardamine hirsuta HOM05D005570 ORTHO05D007368 4.5e-49 198.4 162 61.1
unitig_26.g9513 Utricularia gibba HOM05D005570 ORTHO05D007368 7.7e-49 197.6 164 61.0
Migut.H01280 Erythranthe guttata HOM05D005570 ORTHO05D007368 1.0e-48 197.2 163 61.3
QL10p000758 Quercus lobata HOM05D005570 ORTHO05D007368 1.0e-48 197.2 162 63.0
AL3G42010 Arabidopsis lyrata HOM05D005570 ORTHO05D007368 2.9e-48 195.7 154 62.3
DCAR_008745 Daucus carota HOM05D005570 ORTHO05D007368 2.9e-48 195.7 154 64.3
FAN18G0853 Fragaria x ananassa HOM05D005570 ORTHO05D007368 6.5e-48 194.5 165 62.4
FvH4_5g09330 Fragaria vesca HOM05D005570 ORTHO05D007368 8.5e-48 194.1 164 62.2
Cc02_g29600 Coffea canephora HOM05D005570 ORTHO05D007368 1.1e-47 193.7 152 65.1
FAN04G1041 Fragaria x ananassa HOM05D005570 ORTHO05D007368 1.1e-47 193.7 165 61.8
FAN13G2066 Fragaria x ananassa HOM05D005570 ORTHO05D007368 1.1e-47 193.7 165 62.4
PSO063G6961 Papaver somniferum HOM05D005570 ORTHO05D007368 1.1e-47 193.7 164 60.4
MBI14_g24038_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 2.5e-47 192.6 154 65.6
ATR0751G216 Amborella trichopoda HOM05D005570 ORTHO05D007368 4.2e-47 191.8 162 63.0
PSO421G0324 Papaver somniferum HOM05D005570 ORTHO05D007368 9.4e-47 190.7 162 59.3
PSO063G1837 Papaver somniferum HOM05D005570 ORTHO05D007368 1.2e-46 190.3 164 59.1
ECA240G0244 Erigeron canadensis HOM05D005570 ORTHO05D007368 1.6e-46 189.9 143 67.1
Aqoxy2G01347 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 2.7e-46 189.1 163 60.7
Aqoxy7G00316 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 7.9e-46 187.6 162 60.5
EL10Ac4g10242 Beta vulgaris HOM05D005570 ORTHO05D007368 1.4e-45 186.8 202 52.0
CANSAT01G1761 Cannabis sativa HOM05D005570 ORTHO05D007368 8.8e-45 184.1 150 64.0
Cpa.g.sc136.41 Carica papaya HOM05D005570 ORTHO05D007368 2.0e-44 183.0 138 68.8
MELO3C026167.2 Cucumis melo HOM05D005570 ORTHO05D007368 6.3e-43 177.9 225 46.7
HPP92_013643 Vanilla planifolia HOM05D005570 ORTHO05D007368 1.1e-42 177.2 149 60.4
Oeu015172.1 Olea europaea HOM05D005570 ORTHO05D007368 1.8e-42 176.4 134 67.2
Lj8A137G54 Lonicera japonica HOM05D005570 ORTHO05D007368 7.0e-42 174.5 135 65.9
TWI36G1338 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 2.6e-41 172.6 135 66.7
CSS0039609 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 5.9e-41 171.4 162 56.2
PSO421G0119 Papaver somniferum HOM05D005570 ORTHO05D007368 6.5e-40 167.9 134 64.2
Ah.12g059860 Amaranthus hybridus HOM05D005570 ORTHO05D007368 1.1e-39 167.2 146 59.6
SGA_v2.0_scaffold317G48443 Striga asiatica HOM05D005570 ORTHO05D007368 3.2e-39 165.6 171 54.4
Os09g0478400 Oryza sativa ssp. japonica HOM05D005570 ORTHO05D007368 4.2e-39 165.2 147 55.8
Zm00001eb101470 Zea mays HOM05D005570 ORTHO05D007368 5.5e-39 164.9 147 55.1
CDE10G0507 Ceratophyllum demersum HOM05D005570 ORTHO05D007368 3.6e-38 162.2 132 60.6
SGA_v2.0_scaffold96G29016 Striga asiatica HOM05D005570 ORTHO05D007368 4.7e-38 161.8 133 63.9
vmacro09474 Vaccinium macrocarpon HOM05D005570 ORTHO05D007368 1.8e-37 159.8 164 54.3
MBI14_g13534_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 7.5e-36 154.5 109 67.9
SGA_v2.0_scaffold317G48460 Striga asiatica HOM05D005570 ORTHO05D007368 1.4e-34 150.2 134 61.2
Glyma.20G022600 Glycine max HOM05D005570 ORTHO05D007368 5.9e-33 144.8 104 75.0
Hund21535 Selenicereus undatus HOM05D005570 ORTHO05D007368 1.3e-32 143.7 91 73.6
SEGI_08222 Sequoiadendron giganteum HOM05D005570 ORTHO05D007368 1.1e-31 140.6 125 56.0
Lsat_1_v5_gn_4_24381 Lactuca sativa HOM05D005570 ORTHO05D007368 5.5e-31 138.3 103 68.0
Rhsim04G0030300 Rhododendron simsii HOM05D005570 ORTHO05D007368 2.0e-28 129.8 109 60.6
SGA_v2.0_scaffold28G12060 Striga asiatica HOM05D005570 ORTHO05D007368 4.4e-28 128.6 110 60.9
Mapoly0084s0063 Marchantia polymorpha HOM05D005570 ORTHO05D007368 2.0e-25 119.8 131 46.6
Rhsim04G0030400 Rhododendron simsii HOM05D005570 ORTHO05D007368 5.9e-25 118.2 83 65.1
SGA_v2.0_scaffold2G00813 Striga asiatica HOM05D005570 ORTHO05D007368 3.2e-23 112.5 126 53.2
Pp3c22_13450 Physcomitrium patens HOM05D005570 ORTHO05D007368 7.2e-23 111.3 129 45.7
SGA_v2.0_scaffold323G48653 Striga asiatica HOM05D005570 ORTHO05D007368 2.7e-22 109.4 112 53.6
Gohir.D01G037901 Gossypium hirsutum HOM05D005570 ORTHO05D007368 8.0e-22 107.8 80 66.2
Solyc07g045260.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 2.3e-21 106.3 66 71.2
Oeu031101.2 Olea europaea HOM05D005570 ORTHO05D007368 4.5e-17 92.0 55 72.7
Potri.014G169750 Populus trichocarpa HOM05D005570 ORTHO05D007368 2.3e-16 89.7 54 75.9
Potri.001G241100 Populus trichocarpa HOM05D005570 ORTHO05D007368 3.3e-15 85.9 83 56.6
Lsat_1_v5_gn_4_72161 Lactuca sativa HOM05D005570 ORTHO05D007368 4.7e-14 82.0 53 67.9
Hund30621 Selenicereus undatus HOM05D005570 ORTHO05D007368 6.8e-13 78.2 71 62.0
Hund30622 Selenicereus undatus HOM05D005570 ORTHO05D007368 6.8e-13 78.2 71 62.0
SGA_v2.0_scaffold317G48459 Striga asiatica HOM05D005570 ORTHO05D007368 6.8e-13 78.2 58 63.8
Potri.001G240904 Populus trichocarpa HOM05D005570 ORTHO05D007368 3.4e-12 75.9 54 64.8
CBR_g57071 Chara braunii HOM05D001740 ORTHO05D001468 2.7e-09 66.2 79 36.7


User provided reference genes

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