Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 1.1e-107 393.3 198 100.0
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 4.0e-97 358.2 198 92.9
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 1.2e-88 330.1 197 86.3
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 2.9e-87 325.5 201 85.1
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 1.0e-76 290.4 195 76.4
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 1.7e-76 289.7 195 77.4
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 2.3e-76 289.3 195 77.4
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 3.8e-71 271.9 196 69.4
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 8.4e-71 270.8 204 71.1
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 1.9e-70 269.6 198 68.2
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 7.9e-69 264.2 195 70.8
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 3.9e-68 261.9 193 68.4
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 4.3e-67 258.5 193 69.9
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 5.6e-67 258.1 198 66.2
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 5.3e-65 251.5 193 68.4
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 9.0e-65 250.8 194 65.5
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 1.2e-64 250.4 189 70.4
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 1.2e-64 250.4 189 70.9
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 2.6e-64 249.2 197 67.5
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 3.4e-64 248.8 193 67.4
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 1.3e-63 246.9 193 66.8
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 2.2e-63 246.1 197 66.5
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 8.4e-63 244.2 197 69.0
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.1e-62 243.8 193 67.4
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 1.4e-62 243.4 198 67.7
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.9e-62 243.0 194 67.5
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 1.9e-62 243.0 194 67.5
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 4.2e-62 241.9 192 66.1
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 5.5e-62 241.5 191 66.5
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 1.2e-61 240.4 194 63.4
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 1.6e-61 240.0 199 65.3
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 2.1e-61 239.6 199 65.3
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 2.7e-61 239.2 208 63.5
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 4.6e-61 238.4 200 62.5
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 1.8e-60 236.5 190 66.3
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 3.0e-60 235.7 148 77.7
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 3.9e-60 235.3 202 64.4
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 6.7e-60 234.6 197 66.5
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 6.7e-60 234.6 193 64.2
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 8.7e-60 234.2 193 64.8
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.5e-59 233.4 199 64.3
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 3.3e-59 232.3 198 64.6
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 5.7e-59 231.5 201 61.7
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 5.7e-59 231.5 195 67.7
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 7.4e-59 231.1 196 64.8
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 7.4e-59 231.1 199 63.8
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 9.6e-59 230.7 198 64.1
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 4.8e-58 228.4 188 64.9
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 1.4e-57 226.9 198 63.6
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 2.4e-57 226.1 204 59.3
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 2.0e-56 223.0 195 63.1
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 2.6e-56 222.6 202 59.9
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 5.9e-56 221.5 159 71.1
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 5.9e-56 221.5 200 61.0
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 5.9e-56 221.5 190 64.7
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 1.3e-55 220.3 204 61.3
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 1.7e-55 219.9 198 62.1
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 2.9e-55 219.2 199 58.3
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 3.8e-55 218.8 193 61.1
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 5.0e-55 218.4 204 61.3
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 5.0e-55 218.4 201 61.7
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 6.5e-55 218.0 198 61.1
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.9e-54 216.5 197 57.4
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 2.5e-54 216.1 185 61.6
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 4.2e-54 215.3 190 64.2
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 5.5e-54 214.9 206 58.7
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 7.2e-54 214.5 213 57.3
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.2e-53 213.8 185 58.9
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 1.6e-53 213.4 190 63.7
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 3.5e-53 212.2 139 74.8
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 6.1e-53 211.5 192 60.4
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 1.0e-52 210.7 188 62.2
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 1.1e-51 207.2 199 55.8
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 1.5e-51 206.8 199 55.8
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 1.5e-51 206.8 199 55.8
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 1.5e-51 206.8 199 55.8
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 4.3e-51 205.3 199 55.3
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 9.7e-51 204.1 204 55.4
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 2.2e-50 203.0 198 57.6
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 2.8e-50 202.6 204 53.4
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 2.8e-50 202.6 203 54.7
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 6.3e-50 201.4 210 55.7
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 1.1e-49 200.7 211 57.3
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 2.4e-49 199.5 204 54.4
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 4.1e-49 198.7 193 56.0
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 9.0e-49 197.6 202 54.5
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 3.4e-48 195.7 195 54.9
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 3.4e-48 195.7 158 62.7
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 5.0e-47 191.8 186 55.4
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 1.1e-46 190.7 213 51.6
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 2.5e-46 189.5 194 51.0
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 4.2e-46 188.7 210 52.9
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 5.5e-46 188.3 196 52.0
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 1.6e-45 186.8 147 63.9
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 4.6e-45 185.3 160 61.9
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 1.4e-44 183.7 148 60.8
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 3.3e-43 179.1 211 46.0
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 1.3e-42 177.2 149 58.4
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 2.8e-42 176.0 203 48.3
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 4.8e-42 175.3 199 48.2
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 1.7e-39 166.8 154 54.5
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 2.2e-34 149.8 162 47.5
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 1.5e-27 127.1 168 44.6
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 3.7e-26 122.5 89 64.0
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 1.6e-21 107.1 111 47.7
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 8.0e-21 104.8 144 38.9
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 1.8e-20 103.6 106 60.4
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 3.1e-17 92.8 109 50.5
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 3.8e-15 85.9 151 31.1
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 3.8e-15 85.9 73 58.9
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 2.5e-14 83.2 139 34.5
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 7.2e-14 81.6 138 34.1
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 7.2e-14 81.6 139 30.9
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 6.1e-13 78.6 156 30.8
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 2.6e-11 73.2 135 32.6
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 4.4e-11 72.4 61 59.0


User provided reference genes

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