Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 1.8e-215 752.3 372 100.0
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 2.2e-205 718.8 372 94.4
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 1.1e-204 716.5 372 92.7
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 2.6e-198 695.3 370 90.3
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 9.2e-196 686.8 366 89.1
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 1.6e-195 686.0 368 89.9
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 6.0e-195 684.1 368 88.6
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 1.7e-194 682.6 370 87.8
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 1.9e-193 679.1 368 89.4
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 5.6e-193 677.6 371 89.2
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 9.6e-193 676.8 368 88.3
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 2.6e-190 668.7 365 87.7
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 2.4e-188 662.1 365 87.1
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 2.7e-187 658.7 364 86.5
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 2.3e-186 655.6 365 84.9
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 1.9e-185 652.5 364 86.0
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 2.5e-185 652.1 367 85.0
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 3.3e-185 651.7 366 85.0
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 5.6e-185 651.0 363 84.6
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 9.6e-185 650.2 365 84.1
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 1.6e-184 649.4 364 84.6
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 2.8e-184 648.7 365 83.8
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.8e-183 646.0 365 83.8
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 2.4e-183 645.6 368 84.8
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 4.0e-183 644.8 365 83.8
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 4.0e-183 644.8 368 84.0
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 6.9e-183 644.0 365 84.1
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 2.6e-182 642.1 365 83.3
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 3.4e-182 641.7 366 82.8
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 3.4e-182 641.7 364 84.1
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 7.6e-182 640.6 363 83.5
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 1.3e-181 639.8 363 83.5
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 4.9e-181 637.9 361 83.1
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 4.9e-181 637.9 363 82.6
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 1.4e-180 636.3 369 82.1
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 2.4e-180 635.6 366 81.7
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 2.4e-180 635.6 361 83.4
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 9.3e-180 633.6 368 81.5
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 1.2e-179 633.3 366 81.7
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 1.6e-179 632.9 364 81.9
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 2.1e-179 632.5 364 82.1
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 2.1e-179 632.5 367 79.6
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 4.6e-179 631.3 362 82.3
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 6.0e-179 630.9 367 81.7
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 7.9e-179 630.6 363 82.4
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 1.0e-178 630.2 367 80.4
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 2.3e-178 629.0 362 81.8
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 6.6e-178 627.5 364 80.5
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 8.7e-178 627.1 364 81.0
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 4.3e-177 624.8 366 80.1
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 7.4e-177 624.0 361 79.5
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 3.6e-176 621.7 364 80.2
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 3.6e-176 621.7 364 80.2
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 4.8e-176 621.3 367 80.7
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 8.1e-176 620.5 362 82.3
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 1.8e-175 619.4 397 77.3
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 3.1e-175 618.6 368 79.3
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 1.7e-173 612.8 372 79.3
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 8.4e-173 610.5 360 79.7
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 1.1e-172 610.1 352 81.8
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 2.4e-172 609.0 361 81.7
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 3.2e-172 608.6 361 81.7
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 8.7e-170 600.5 365 78.4
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 1.3e-168 596.7 364 76.9
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 4.8e-168 594.7 382 75.7
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 1.1e-167 593.6 374 76.7
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 4.0e-167 591.7 364 76.4
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 1.0e-165 587.0 365 75.6
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 1.3e-165 586.6 364 76.1
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 1.3e-165 586.6 360 75.8
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 1.3e-165 586.6 381 75.1
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 1.7e-165 586.3 364 76.4
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 6.5e-165 584.3 368 75.3
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 8.4e-165 583.9 364 75.8
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 1.4e-164 583.2 364 76.6
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 2.5e-164 582.4 364 75.3
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 9.3e-164 580.5 364 75.3
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 2.1e-163 579.3 364 75.0
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 1.0e-162 577.0 381 73.0
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 2.5e-161 572.4 365 74.8
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 2.0e-158 562.8 351 75.2
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 1.7e-157 559.7 352 76.7
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 6.5e-157 557.8 364 73.4
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 2.7e-155 552.4 363 73.8
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 1.4e-151 540.0 301 86.7
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 2.3e-146 522.7 303 82.2
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 9.7e-145 517.3 285 87.0
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 3.1e-143 512.3 285 86.0
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 6.5e-141 504.6 270 87.4
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 2.5e-140 502.7 365 65.8
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 7.9e-139 497.7 364 65.7
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 3.7e-136 488.8 366 65.0
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 5.3e-135 485.0 368 64.7
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 1.9e-132 476.5 267 85.0
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 6.7e-130 468.0 306 74.5
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 7.7e-118 427.9 242 85.5
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 4.0e-114 415.6 230 85.7
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 8.8e-114 414.5 224 83.5
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 4.1e-111 405.6 363 57.6
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 2.9e-109 399.4 223 83.0
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 6.6e-93 345.1 183 90.2
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 5.1e-69 265.8 212 63.7
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 4.3e-52 209.5 117 82.1
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 7.4e-52 208.8 115 82.6
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 2.1e-51 207.2 116 79.3
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 3.8e-48 196.4 130 72.3
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 4.9e-48 196.1 117 76.9
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.1e-47 194.9 117 76.9
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.1e-47 194.9 117 76.9
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.8e-45 187.6 130 70.0
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 4.3e-36 156.4 96 79.2
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 1.0e-32 145.2 92 70.7
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.3e-19 101.7 92 58.7
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 8.0e-14 82.4 54 75.9
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 1.4e-13 81.6 54 74.1
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 1.4e-13 81.6 54 75.9
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 9.7e-12 75.5 54 70.4
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 2.2e-11 74.3 279 26.2
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 4.5e-09 66.6 43 69.8
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 6.5e-08 62.8 64 51.6
Ca_29050_v3 Cicer arietinum L. HOM05D006567 ORTHO05D018939 3.2e-07 60.5 206 27.7


User provided reference genes

Program Settings