Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 6.7e-111 404.1 207 100.0
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 7.7e-51 204.5 112 94.6
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 7.8e-43 177.9 112 83.9
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 1.2e-40 170.6 112 81.2
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 2.3e-39 166.4 116 79.3
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 1.5e-38 163.7 110 79.1
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 3.4e-38 162.5 109 78.0
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 6.4e-37 158.3 111 77.5
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 2.4e-36 156.4 94 87.2
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 1.2e-35 154.1 102 79.4
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 1.2e-35 154.1 102 79.4
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 6.6e-34 148.3 106 74.5
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 6.6e-34 148.3 101 75.2
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 5.6e-33 145.2 101 73.3
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 7.3e-33 144.8 100 77.0
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 7.3e-33 144.8 101 76.2
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 3.6e-32 142.5 106 73.6
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 3.6e-32 142.5 100 76.0
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.8e-31 140.2 103 72.8
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 2.3e-31 139.8 112 65.2
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 3.1e-31 139.4 113 65.5
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 3.1e-31 139.4 107 67.3
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 5.2e-31 138.7 113 65.5
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 6.8e-31 138.3 105 74.3
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 6.8e-31 138.3 113 66.4
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 2.6e-30 136.3 109 67.9
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 2.6e-30 136.3 99 76.8
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 3.4e-30 136.0 95 75.8
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 4.4e-30 135.6 96 75.0
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 4.4e-30 135.6 106 67.9
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 5.8e-30 135.2 106 67.0
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 7.5e-30 134.8 100 72.0
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 7.5e-30 134.8 103 68.9
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 9.8e-30 134.4 95 78.9
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 1.3e-29 134.0 102 68.6
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 1.3e-29 134.0 96 74.0
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 1.7e-29 133.7 96 75.0
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 2.9e-29 132.9 102 72.5
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 2.9e-29 132.9 95 75.8
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 3.7e-29 132.5 102 72.5
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 1.4e-28 130.6 97 75.3
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 3.2e-28 129.4 96 71.9
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 4.1e-28 129.0 100 75.0
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 7.0e-28 128.3 101 70.3
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 9.2e-28 127.9 102 70.6
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 1.6e-27 127.1 104 66.3
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 2.1e-27 126.7 92 77.2
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 4.6e-27 125.6 91 75.8
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 4.6e-27 125.6 94 76.6
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 4.6e-27 125.6 124 61.3
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 4.6e-27 125.6 111 64.9
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 7.8e-27 124.8 90 75.6
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 7.8e-27 124.8 100 71.0
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 1.0e-26 124.4 106 67.0
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 1.7e-26 123.6 104 71.2
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 2.3e-26 123.2 101 63.4
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 6.6e-26 121.7 105 67.6
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 1.5e-25 120.6 97 70.1
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 2.5e-25 119.8 101 68.3
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 2.5e-25 119.8 93 73.1
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 2.5e-25 119.8 100 70.0
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 3.3e-25 119.4 101 73.3
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 7.3e-25 118.2 112 59.8
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 7.3e-25 118.2 103 66.0
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 1.2e-24 117.5 96 65.6
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 2.1e-24 116.7 100 66.0
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 6.2e-24 115.2 105 62.9
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 1.1e-23 114.4 105 65.7
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 2.3e-23 113.2 101 60.4
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 3.1e-23 112.8 96 60.4
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 3.1e-23 112.8 102 57.8
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 3.1e-23 112.8 94 61.7
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 5.2e-23 112.1 97 66.0
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 6.8e-23 111.7 96 60.4
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 6.8e-23 111.7 97 60.8
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 5.8e-22 108.6 90 61.1
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 5.8e-22 108.6 90 61.1
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 7.5e-22 108.2 72 80.6
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 9.9e-22 107.8 111 55.0
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 1.3e-21 107.5 90 60.0
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 1.3e-21 107.5 90 60.0
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 3.7e-21 105.9 97 55.7
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 6.4e-21 105.1 99 55.6
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 2.4e-20 103.2 106 54.7
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 5.4e-20 102.1 152 46.1
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 2.1e-19 100.1 70 80.0
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 2.7e-19 99.8 70 75.7
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 4.6e-19 99.0 101 55.4
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 6.0e-19 98.6 68 77.9
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 1.3e-18 97.4 123 48.0
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 1.7e-18 97.1 123 45.5
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 3.0e-18 96.3 102 53.9
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 6.6e-18 95.1 92 57.6
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 2.5e-17 93.2 77 70.1
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 3.3e-17 92.8 66 78.8
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 4.3e-17 92.4 84 66.7
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 9.5e-17 91.3 91 62.6
VMungo0720G0108 Vigna mungo HOM05D000001 ORTHO05D000003 1.2e-16 90.9 46 95.7
VMungo0251G2488 Vigna mungo HOM05D000775 ORTHO05D000585 8.1e-16 88.2 52 84.6
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 1.4e-15 87.4 73 61.6
VMungo0720G1295 Vigna mungo HOM05D000483 ORTHO05D000158 1.3e-13 80.9 47 89.4
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 1.1e-12 77.8 117 44.4
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 3.2e-12 76.3 93 48.4
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 1.2e-11 74.3 84 48.8
VMungo0647G0543 Vigna mungo HOM05D007285 ORTHO05D009224 2.1e-11 73.6 40 92.5
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 1.0e-10 71.2 101 43.6
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 1.3e-10 70.9 99 46.5
VMungo0251G1927 Vigna mungo HOM05D000749 ORTHO05D005685 2.3e-10 70.1 38 94.7
VMungo1127G0823 Vigna mungo HOM05D000063 ORTHO05D003101 3.9e-10 69.3 61 65.6
VMungo1215G3382 Vigna mungo HOM05D000065 ORTHO05D000162 6.2e-08 62.0 40 85.0
SEGI_39568 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 1.5e-06 57.4 109 38.5
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 5.8e-06 55.5 65 49.2


User provided reference genes

Program Settings