Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0147G0001 Vigna mungo HOM05D007695 ORTHO05D009675 1.4e-110 402.9 192 100.0
Lj3g0020370 Lotus japonicus HOM05D007695 ORTHO05D009675 2.2e-36 156.4 91 79.1
Glyma.15G259802 Glycine max HOM05D007695 ORTHO05D009675 5.0e-36 155.2 86 83.7
Lalb_Chr25g0284741 Lupinus albus HOM05D007695 ORTHO05D009675 7.2e-35 151.4 81 85.2
Glyma.08G167800 Glycine max HOM05D007695 ORTHO05D009675 1.6e-34 150.2 82 82.9
Psat1g013560 Pisum sativum HOM05D007695 ORTHO05D009675 5.2e-33 145.2 86 76.7
TPR.G33812 Trifolium pratense HOM05D007695 ORTHO05D009675 2.0e-32 143.3 85 77.6
MD10G1206200 Malus domestica HOM05D007695 ORTHO05D009675 1.1e-30 137.5 91 71.4
CsaV3_7G022890 Cucumis sativus L. HOM05D007695 ORTHO05D009675 7.0e-30 134.8 90 68.9
GSVIVG01036789001 Vitis vinifera HOM05D007695 ORTHO05D009675 1.2e-29 134.0 95 65.3
Duzib187G1742 Durio zibethinus HOM05D000001 ORTHO05D000003 1.6e-29 133.7 88 71.6
Duzib213G0064 Durio zibethinus HOM05D007695 ORTHO05D009675 1.6e-29 133.7 104 64.4
Aqoxy1G01977 Aquilegia oxysepala HOM05D007695 ORTHO05D009675 2.7e-29 132.9 89 66.3
Gohir.A13G123700 Gossypium hirsutum HOM05D007695 ORTHO05D009675 2.7e-29 132.9 84 76.2
Gohir.D13G127533 Gossypium hirsutum HOM05D007695 ORTHO05D009675 1.0e-28 131.0 82 75.6
Gorai.013G142800 Gossypium raimondii HOM05D007695 ORTHO05D009675 1.0e-28 131.0 82 75.6
Thecc.07G171400 Theobroma cacao HOM05D007695 ORTHO05D009675 1.0e-28 131.0 88 71.6
CiPaw.11G064100 Carya illinoinensis HOM05D007695 ORTHO05D009675 1.3e-28 130.6 85 72.9
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 1.3e-28 130.6 92 64.1
QL04p080880 Quercus lobata HOM05D007695 ORTHO05D009675 1.7e-28 130.2 82 72.0
Peaxi162Scf00225g00098 Petunia axillaris HOM05D007695 ORTHO05D009675 2.2e-28 129.8 76 76.3
Cfa010552 Carpinus fangiana HOM05D007695 ORTHO05D009675 5.0e-28 128.6 87 69.0
CANSAT80G0100 Cannabis sativa HOM05D007695 ORTHO05D009675 6.5e-28 128.3 81 70.4
Ciclev10006169m.g Citrus clementina HOM05D007695 ORTHO05D009675 6.5e-28 128.3 84 69.0
COL.COLO4_32235 Corchorus olitorius HOM05D007695 ORTHO05D009675 1.5e-27 127.1 83 72.3
ClCG09G022690 Citrullus lanatus HOM05D007695 ORTHO05D009675 2.5e-27 126.3 122 52.5
Nitab4.5_0007560g0010 Nicotiana tabacum HOM05D007695 ORTHO05D009675 2.5e-27 126.3 76 75.0
Nitab4.5_0010557g0010 Nicotiana tabacum HOM05D007695 ORTHO05D009675 3.2e-27 125.9 76 75.0
Actinidia37127 Actinidia chinensis HOM05D007695 ORTHO05D009675 5.5e-27 125.2 81 70.4
MD05G1224500 Malus domestica HOM05D007695 ORTHO05D009675 9.4e-27 124.4 82 72.0
Zm00001eb233100 Zea mays HOM05D007695 ORTHO05D009675 9.4e-27 124.4 105 58.1
Aa31LG4G1810 Aethionema arabicum HOM05D007695 ORTHO05D009675 1.6e-26 123.6 95 61.1
BcaB02g08673 Brassica carinata HOM05D007695 ORTHO05D009675 1.6e-26 123.6 90 62.2
CAN.G610.6 Capsicum annuum HOM05D007695 ORTHO05D009675 2.1e-26 123.2 75 73.3
THA.LOC104808131 Tarenaya hassleriana HOM05D007695 ORTHO05D009675 2.1e-26 123.2 85 67.1
Oeu034976.1 Olea europaea HOM05D000672 ORTHO05D009675 2.7e-26 122.9 93 60.2
PGR031G0168 Punica granatum HOM05D007695 ORTHO05D009675 3.6e-26 122.5 76 73.7
Sed0008622 Sechium edule HOM05D007695 ORTHO05D009675 3.6e-26 122.5 91 59.3
BraA07t31939Z Brassica rapa HOM05D007695 ORTHO05D009675 4.7e-26 122.1 90 60.0
Sopen05g004520 Solanum pennellii HOM05D007695 ORTHO05D009675 4.7e-26 122.1 76 72.4
RcHm_v2.0_Chr5g0025651 Rosa chinensis HOM05D007695 ORTHO05D009675 6.1e-26 121.7 74 73.0
PGSC0003DMG400030526 Solanum tuberosum HOM05D007695 ORTHO05D009675 6.1e-26 121.7 76 72.4
BcaC08g47483 Brassica carinata HOM05D007695 ORTHO05D009675 8.0e-26 121.3 90 60.0
A07p44310 Brassica napus HOM05D007695 ORTHO05D009675 8.0e-26 121.3 90 60.0
C06p53060 Brassica napus HOM05D007695 ORTHO05D009675 8.0e-26 121.3 90 60.0
BolC6t40323H Brassica oleracea HOM05D007695 ORTHO05D009675 8.0e-26 121.3 90 60.0
Sp5g34250 Schrenkiella parvula HOM05D007695 ORTHO05D009675 8.0e-26 121.3 87 62.1
Solyc05g008750.3 Solanum lycopersicum HOM05D007695 ORTHO05D009675 1.0e-25 120.9 76 71.1
CARHR072850 Cardamine hirsuta HOM05D007695 ORTHO05D009675 1.4e-25 120.6 87 62.1
Cc05_g01290 Coffea canephora HOM05D007695 ORTHO05D009675 1.4e-25 120.6 97 58.8
Thhalv10019257m.g Eutrema salsugineum HOM05D007695 ORTHO05D009675 1.4e-25 120.6 95 61.1
FAN25G3643 Fragaria x ananassa HOM05D007695 ORTHO05D009675 1.4e-25 120.6 86 64.0
HanXRQChr15g0494421 Helianthus annuus HOM05D007695 ORTHO05D009675 1.4e-25 120.6 97 59.8
Lsat_1_v5_gn_7_110340 Lactuca sativa HOM05D007695 ORTHO05D009675 1.4e-25 120.6 75 70.7
Rhsim04G0004200 Rhododendron simsii HOM05D007695 ORTHO05D009675 1.4e-25 120.6 87 63.2
EL10Ac2g03268 Beta vulgaris HOM05D007695 ORTHO05D009675 1.8e-25 120.2 77 71.4
Dinv19595 Davidia involucrata HOM05D007695 ORTHO05D009675 1.8e-25 120.2 74 71.6
Os02g0170200 Oryza sativa ssp. japonica HOM05D007695 ORTHO05D009675 1.8e-25 120.2 74 73.0
Sabra05G0078900 Salix brachista HOM05D007695 ORTHO05D009675 1.8e-25 120.2 81 69.1
Potri.007G068500 Populus trichocarpa HOM05D007695 ORTHO05D009675 2.3e-25 119.8 94 61.7
CSS0012508 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D000005 3.0e-25 119.4 95 60.0
FAN11G1768 Fragaria x ananassa HOM05D007695 ORTHO05D009675 3.0e-25 119.4 83 62.7
Potri.005G095700 Populus trichocarpa HOM05D007695 ORTHO05D009675 3.0e-25 119.4 84 67.9
TWI32G1143 Tripterygium wilfordii HOM05D007695 ORTHO05D009675 3.0e-25 119.4 87 63.2
Hma1.2p1_0119F.1_g056770 Hydrangea macrophylla HOM05D007695 ORTHO05D009675 4.0e-25 119.0 92 62.0
Eucgr.F04454 Eucalyptus grandis HOM05D007695 ORTHO05D009675 6.8e-25 118.2 85 64.7
FAN21G0117 Fragaria x ananassa HOM05D007695 ORTHO05D009675 6.8e-25 118.2 74 70.3
Migut.M01534 Erythranthe guttata HOM05D007695 ORTHO05D009675 1.2e-24 117.5 94 60.6
vmacro09774 Vaccinium macrocarpon HOM05D007695 ORTHO05D009675 1.2e-24 117.5 84 64.3
HPP92_016681 Vanilla planifolia HOM05D007695 ORTHO05D009675 1.2e-24 117.5 80 65.0
ECA236G2936 Erigeron canadensis HOM05D007695 ORTHO05D009675 1.5e-24 117.1 96 58.3
AL2G39670 Arabidopsis lyrata HOM05D007695 ORTHO05D009675 2.0e-24 116.7 87 59.8
DCAR_016834 Daucus carota HOM05D007695 ORTHO05D009675 3.4e-24 115.9 81 64.2
PSO339G5408 Papaver somniferum HOM05D007695 ORTHO05D009675 4.4e-24 115.5 71 67.6
SGA_v2.0_scaffold7G03606 Striga asiatica HOM05D007695 ORTHO05D009675 5.7e-24 115.2 73 69.9
FvH4_3g15210 Fragaria vesca HOM05D007695 ORTHO05D009675 7.5e-24 114.8 83 60.2
FAN16G2644 Fragaria x ananassa HOM05D007695 ORTHO05D009675 9.8e-24 114.4 83 60.2
PSO384G4287 Papaver somniferum HOM05D007695 ORTHO05D009675 1.3e-23 114.0 71 66.2
Carub.0002s2607 Capsella rubella HOM05D007695 ORTHO05D009675 1.7e-23 113.6 72 66.7
Sc09g0007600 Simmondsia chinensis HOM05D007695 ORTHO05D009675 1.7e-23 113.6 86 60.5
MSTRG.7074 Avicennia marina HOM05D007695 ORTHO05D009675 4.8e-23 112.1 76 64.5
AT1G79200 Arabidopsis thaliana HOM05D007695 ORTHO05D009675 1.4e-22 110.5 88 55.7
AUR62037645 Chenopodium quinoa HOM05D007695 ORTHO05D009675 1.2e-21 107.5 88 54.5
SalBow8G0946 Salvia bowleyana HOM05D007695 ORTHO05D009675 3.5e-21 105.9 91 53.8
Phvul.005G059400 Phaseolus vulgaris HOM05D007695 ORTHO05D009675 2.3e-20 103.2 54 88.9
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 3.8e-20 102.4 149 45.6
Hund12430 Selenicereus undatus HOM05D007695 ORTHO05D009675 5.0e-20 102.1 66 69.7
SEGI_05035 Sequoiadendron giganteum HOM05D007695 ORTHO05D009675 5.0e-20 102.1 91 52.7
Mapoly0004s0265 Marchantia polymorpha HOM05D007695 ORTHO05D009675 2.1e-18 96.7 72 56.9
unitig_748.g7621 Utricularia gibba HOM05D000001 ORTHO05D000003 3.6e-18 95.9 85 52.9
VMungo1383G1629 Vigna mungo HOM05D007695 ORTHO05D009675 5.2e-17 92.0 107 47.7
Pp3c22_2020 Physcomitrium patens HOM05D007695 ORTHO05D009675 2.6e-16 89.7 70 57.1
Peaxi162Scf00225g00095 Petunia axillaris HOM05D007695 ORTHO05D009675 9.8e-16 87.8 55 70.9
Ah.16g106010 Amaranthus hybridus HOM05D007695 ORTHO05D009675 1.7e-15 87.0 60 63.3
CBR_g3127 Chara braunii HOM05D000017 ORTHO05D000013 2.3e-12 76.6 69 53.6
Cre06.g255250 Chlamydomonas reinhardtii HOM05D007695 ORTHO05D009675 3.3e-11 72.8 72 43.1
ECA234G4565 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.3e-11 72.8 70 50.0
SMO145G0213 Selaginella moellendorffii HOM05D007695 ORTHO05D009675 2.8e-10 69.7 72 43.1
ECA233G0770 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-08 63.5 57 49.1
ECA233G0465 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-07 60.8 68 44.1
ECA240G1063 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-07 60.8 64 43.8
ECA234G4858 Erigeron canadensis HOM05D000006 ORTHO05D000091 4.9e-07 58.9 72 45.8
ECA233G0504 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.9e-06 57.0 57 45.6
ECA248G1389 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-06 56.6 72 41.7
ECA236G0535 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.0e-06 55.1 62 45.2
Ah.14g079620 Amaranthus hybridus HOM05D055317 ORTHO05D018264 9.2e-06 54.7 56 46.4


User provided reference genes

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