Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0100G0003 Vigna mungo HOM05D003765 ORTHO05D004561 1.4e-78 296.2 148 100.0
VMungo0251G2630 Vigna mungo HOM05D003765 ORTHO05D004561 2.9e-60 235.3 124 92.7
VMungo0464G1637 Vigna mungo HOM05D003765 ORTHO05D004561 2.6e-48 195.7 138 72.5
Phvul.004G123200 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 3.7e-47 191.8 138 72.5
Glyma.09G148700 Glycine max HOM05D003765 ORTHO05D004561 2.3e-44 182.6 122 77.0
Glyma.16G200400 Glycine max HOM05D003765 ORTHO05D004561 3.3e-43 178.7 115 79.1
Lalb_Chr03g0034171 Lupinus albus HOM05D003765 ORTHO05D004561 1.6e-29 133.3 105 70.5
Lj5g0012460 Lotus japonicus HOM05D003765 ORTHO05D004561 2.7e-29 132.5 102 73.5
Lj2g0000316 Lotus japonicus HOM05D003765 ORTHO05D004561 5.6e-27 124.8 120 63.3
Thecc.03G167000 Theobroma cacao HOM05D003765 ORTHO05D004561 1.2e-24 117.1 112 62.5
Manes.06G141500 Manihot esculenta HOM05D003765 ORTHO05D004561 3.7e-23 112.1 128 55.5
Phvul.007G065400 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 3.7e-23 112.1 109 62.4
Ciclev10004387m.g Citrus clementina HOM05D003765 ORTHO05D004561 1.9e-22 109.8 115 60.0
COL.COLO4_14229 Corchorus olitorius HOM05D003765 ORTHO05D004561 1.9e-22 109.8 115 60.9
Glyma.20G154100 Glycine max HOM05D003765 ORTHO05D004561 2.4e-22 109.4 110 61.8
FAN01G1737 Fragaria x ananassa HOM05D003765 ORTHO05D004561 4.1e-22 108.6 115 56.5
TPR.G17415 Trifolium pratense HOM05D003765 ORTHO05D004561 5.4e-22 108.2 109 60.6
FAN03G1055 Fragaria x ananassa HOM05D003765 ORTHO05D004561 9.2e-22 107.5 115 56.5
FAN03G1770 Fragaria x ananassa HOM05D003765 ORTHO05D004561 9.2e-22 107.5 115 55.7
FAN10G2022 Fragaria x ananassa HOM05D003765 ORTHO05D004561 9.2e-22 107.5 115 56.5
Glyma.10G240600 Glycine max HOM05D003765 ORTHO05D004561 9.2e-22 107.5 110 61.8
FvH4_7g28730 Fragaria vesca HOM05D003765 ORTHO05D004561 1.2e-21 107.1 115 55.7
FAN06G1616 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.1e-21 106.3 115 54.8
FAN06G4109 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.1e-21 106.3 115 54.8
MD00G1004300 Malus domestica HOM05D003765 ORTHO05D004561 1.3e-20 103.6 118 52.5
Medtr1g101910 Medicago truncatula HOM05D003765 ORTHO05D004561 1.7e-20 103.2 107 60.7
RcHm_v2.0_Chr1g0376241 Rosa chinensis HOM05D003765 ORTHO05D004561 1.7e-20 103.2 115 55.7
MD01G1193200 Malus domestica HOM05D003765 ORTHO05D004561 3.0e-20 102.4 100 57.0
Lalb_Chr21g0304901 Lupinus albus HOM05D003765 ORTHO05D004561 1.5e-19 100.1 112 58.0
Haze_13790 Corylus avellana HOM05D003765 ORTHO05D004561 1.9e-19 99.8 108 55.6
Duzib084G1451 Durio zibethinus HOM05D003765 ORTHO05D004561 1.9e-19 99.8 111 56.8
Manes.14G030900 Manihot esculenta HOM05D003765 ORTHO05D004561 1.9e-19 99.8 111 55.9
Lalb_Chr02g0140881 Lupinus albus HOM05D003765 ORTHO05D004561 5.6e-19 98.2 109 58.7
Cpa.g.sc4.199 Carica papaya HOM05D003765 ORTHO05D004561 7.3e-19 97.8 114 57.0
Gohir.D12G262800 Gossypium hirsutum HOM05D003765 ORTHO05D004561 7.3e-19 97.8 112 54.5
Gorai.008G281700 Gossypium raimondii HOM05D003765 ORTHO05D004561 7.3e-19 97.8 112 54.5
Medtr6g089530 Medicago truncatula HOM05D003765 ORTHO05D004561 7.3e-19 97.8 108 56.5
TPR.G21305 Trifolium pratense HOM05D003765 ORTHO05D004561 1.6e-18 96.7 108 56.5
Actinidia13542 Actinidia chinensis HOM05D003765 ORTHO05D004561 2.8e-18 95.9 89 59.6
Dinv35140 Davidia involucrata HOM05D003765 ORTHO05D004561 2.8e-18 95.9 89 60.7
Psat1g111440 Pisum sativum HOM05D003765 ORTHO05D004561 6.2e-18 94.7 103 56.3
Prupe.2G287400 Prunus persica HOM05D003765 ORTHO05D004561 6.2e-18 94.7 105 57.1
Atru.chr1.559 Acer truncatum HOM05D003765 ORTHO05D004561 1.4e-17 93.6 109 56.9
CiPaw.03G100300 Carya illinoinensis HOM05D003765 ORTHO05D004561 1.8e-17 93.2 109 55.0
arahy.Tifrunner.gnm1.ann1.G7HECD Arachis hypogaea HOM05D003765 ORTHO05D004561 2.3e-17 92.8 100 60.0
arahy.Tifrunner.gnm1.ann1.S2H83J Arachis hypogaea HOM05D003765 ORTHO05D004561 5.2e-17 91.7 100 59.0
Gohir.A12G262100 Gossypium hirsutum HOM05D003765 ORTHO05D004561 5.2e-17 91.7 131 47.3
Potri.012G132900 Populus trichocarpa HOM05D003765 ORTHO05D004561 1.5e-16 90.1 146 47.9
Ca_10812_v3 Cicer arietinum L. HOM05D003765 ORTHO05D004561 2.6e-16 89.4 101 58.4
Duzib205G1056 Durio zibethinus HOM05D003765 ORTHO05D004561 3.4e-16 89.0 100 56.0
Nitab4.5_0000599g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 3.4e-16 89.0 105 55.2
PGR042G0955 Punica granatum HOM05D003765 ORTHO05D004561 5.8e-16 88.2 109 54.1
Sopen03g002830 Solanum pennellii HOM05D003765 ORTHO05D004561 7.5e-16 87.8 107 54.2
Potri.015G135200 Populus trichocarpa HOM05D003765 ORTHO05D004561 1.3e-15 87.0 145 45.5
Dinv40025 Davidia involucrata HOM05D003765 ORTHO05D000169 2.2e-15 86.3 123 50.4
Oeu030141.1 Olea europaea HOM05D003765 ORTHO05D004561 2.9e-15 85.9 112 50.9
Sabra12G0100000 Salix brachista HOM05D003765 ORTHO05D004561 2.9e-15 85.9 118 50.0
PGSC0003DMG400024251 Solanum tuberosum HOM05D003765 ORTHO05D004561 2.9e-15 85.9 108 54.6
Sabra15G0147100 Salix brachista HOM05D003765 ORTHO05D004561 4.9e-15 85.1 110 53.6
Aqoxy7G00497 Aquilegia oxysepala HOM05D003765 ORTHO05D004561 8.3e-15 84.3 98 55.1
CANSAT21G2021 Cannabis sativa HOM05D003765 ORTHO05D004561 8.3e-15 84.3 112 52.7
Dinv28506 Davidia involucrata HOM05D003765 ORTHO05D004561 1.4e-14 83.6 122 48.4
Eucgr.A02847 Eucalyptus grandis HOM05D003765 ORTHO05D004561 1.4e-14 83.6 84 59.5
Lj1A988T34 Lonicera japonica HOM05D003765 ORTHO05D004561 1.4e-14 83.6 111 45.9
Hma1.2p1_0488F.1_g163950 Hydrangea macrophylla HOM05D003765 ORTHO05D004561 1.9e-14 83.2 90 58.9
TAR629G2057 Trochodendron aralioides HOM05D003765 ORTHO05D004561 1.9e-14 83.2 87 57.5
Nitab4.5_0004911g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 2.4e-14 82.8 117 48.7
Peaxi162Scf00192g00516 Petunia axillaris HOM05D003765 ORTHO05D004561 5.4e-14 81.6 118 49.2
Nn1g01288 Nelumbo nucifera HOM05D003765 ORTHO05D004561 9.2e-14 80.9 108 47.2
Gohir.A09G179400 Gossypium hirsutum HOM05D003765 ORTHO05D004561 1.2e-13 80.5 106 48.1
Gorai.006G196800 Gossypium raimondii HOM05D003765 ORTHO05D004561 2.7e-13 79.3 106 47.2
VMungo0720G0810 Vigna mungo HOM05D003765 ORTHO05D004561 2.7e-13 79.3 89 52.8
MBI04_g06623_MAGBIO Magnolia biondii HOM05D003765 ORTHO05D004561 3.5e-13 79.0 109 49.5
Solyc03g006840.4 Solanum lycopersicum HOM05D003765 ORTHO05D004561 7.8e-13 77.8 107 53.3
Rhsim03G0174800 Rhododendron simsii HOM05D003765 ORTHO05D004561 1.0e-12 77.4 90 55.6
DCAR_009410 Daucus carota HOM05D003765 ORTHO05D004561 1.3e-12 77.0 99 50.5
Gohir.D09G174700 Gossypium hirsutum HOM05D003765 ORTHO05D004561 1.3e-12 77.0 106 46.2
vmacro06738 Vaccinium macrocarpon HOM05D003765 ORTHO05D004561 2.3e-12 76.3 119 47.9
DCAR_014604 Daucus carota HOM05D003765 ORTHO05D004561 3.0e-12 75.9 111 51.4
Nitab4.5_0000205g0170 Nicotiana tabacum HOM05D003765 ORTHO05D004561 3.0e-12 75.9 100 48.0
THA.LOC104824843 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 3.9e-12 75.5 111 45.9
MSTRG.8430 Avicennia marina HOM05D003765 ORTHO05D004561 6.6e-12 74.7 80 56.2
Peaxi162Scf00557g00216 Petunia axillaris HOM05D003765 ORTHO05D004561 6.6e-12 74.7 111 49.5
MSTRG.114 Avicennia marina HOM05D003765 ORTHO05D004561 8.6e-12 74.3 106 43.4
ClCG05G007700 Citrullus lanatus HOM05D003765 ORTHO05D004561 8.6e-12 74.3 84 51.2
EL10Ac3g05741 Beta vulgaris HOM05D003765 ORTHO05D004561 1.5e-11 73.6 90 54.4
AUR62016059 Chenopodium quinoa HOM05D003765 ORTHO05D004561 2.5e-11 72.8 90 53.3
CDE04G3755 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 7.3e-11 71.2 103 44.7
Cc02_g03580 Coffea canephora HOM05D003765 ORTHO05D004561 7.3e-11 71.2 100 50.0
Nn6g34319 Nelumbo nucifera HOM05D003765 ORTHO05D004561 1.2e-10 70.5 137 39.4
PSO478G3102 Papaver somniferum HOM05D003765 ORTHO05D004561 1.6e-10 70.1 101 51.5
Oeu030257.1 Olea europaea HOM05D003765 ORTHO05D004561 2.1e-10 69.7 109 43.1
PSO782G0143 Papaver somniferum HOM05D003765 ORTHO05D004561 2.8e-10 69.3 101 51.5
Sp6g14100 Schrenkiella parvula HOM05D003765 ORTHO05D004561 8.1e-10 67.8 89 47.2
AUR62021267 Chenopodium quinoa HOM05D003765 ORTHO05D004561 2.4e-09 66.2 88 51.1
CDE07G1851 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 3.1e-09 65.9 103 41.7
MELO3C006859.2 Cucumis melo HOM05D003765 ORTHO05D004561 4.0e-09 65.5 83 47.0
Thhalv10012958m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 4.0e-09 65.5 102 46.1
HanXRQChr14g0461811 Helianthus annuus HOM05D003765 ORTHO05D004561 5.2e-09 65.1 81 49.4
CsaV3_3G016640 Cucumis sativus L. HOM05D003765 ORTHO05D004561 6.8e-09 64.7 78 48.7
Lsat_1_v5_gn_9_53700 Lactuca sativa HOM05D003765 ORTHO05D004561 6.8e-09 64.7 100 43.0
Ah.07g208800 Amaranthus hybridus HOM05D003765 ORTHO05D004561 2.0e-08 63.2 87 49.4
THA.LOC104818268 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 2.0e-08 63.2 111 41.4
Psat6g201640 Pisum sativum HOM05D003765 ORTHO05D004561 2.6e-08 62.8 109 47.7
Sed0025435 Sechium edule HOM05D003765 ORTHO05D004561 2.6e-08 62.8 83 44.6
GSVIVG01018447001 Vitis vinifera HOM05D003765 ORTHO05D004561 7.6e-08 61.2 76 52.6
AT5G62170 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 9.9e-08 60.8 112 42.0
Carub.0008s1189 Capsella rubella HOM05D003765 ORTHO05D004561 9.9e-08 60.8 101 42.6
Aa31LG3G8290 Aethionema arabicum HOM05D003765 ORTHO05D004561 1.7e-07 60.1 108 43.5
Thhalv10003732m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 2.2e-07 59.7 115 42.6
THA.LOC104798744 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 2.2e-07 59.7 93 45.2
THA.LOC104811493 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 2.2e-07 59.7 110 40.0
Sp2g25350 Schrenkiella parvula HOM05D003765 ORTHO05D004561 3.8e-07 58.9 111 38.7
Aa31LG11G1410 Aethionema arabicum HOM05D003765 ORTHO05D004561 4.9e-07 58.5 109 42.2
Aa31LG6G8690 Aethionema arabicum HOM05D003765 ORTHO05D004561 6.4e-07 58.2 109 42.2
CARHR264740 Cardamine hirsuta HOM05D003765 ORTHO05D004561 8.4e-07 57.8 75 45.3
C03p64740 Brassica napus HOM05D003765 ORTHO05D004561 1.1e-06 57.4 112 39.3
BolC3t18736H Brassica oleracea HOM05D003765 ORTHO05D004561 1.1e-06 57.4 112 39.3
AT5G51850 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 2.4e-06 56.2 99 41.4
A06p28880 Brassica napus HOM05D003765 ORTHO05D004561 2.4e-06 56.2 113 40.7
BraA06t25836Z Brassica rapa HOM05D003765 ORTHO05D004561 2.4e-06 56.2 113 40.7
CARHR275960 Cardamine hirsuta HOM05D003765 ORTHO05D004561 4.2e-06 55.5 109 41.3
SalBow2G1841 Salvia bowleyana HOM05D003765 ORTHO05D004561 5.4e-06 55.1 93 43.0
AL8G38980 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 9.2e-06 54.3 116 40.5
Thhalv10025080m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 9.2e-06 54.3 79 46.8


User provided reference genes

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