Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10029446m.g Eutrema salsugineum HOM05D012458 ORTHO05D014337 1.6e-86 322.8 168 100.0
AL6G45000 Arabidopsis lyrata HOM05D012458 ORTHO05D014337 2.2e-56 222.6 143 85.3
Carub.0006s2965 Capsella rubella HOM05D012458 ORTHO05D014337 1.8e-53 213.0 143 81.1
AT4G10910 Arabidopsis thaliana HOM05D012458 ORTHO05D014337 1.5e-52 209.9 135 85.9
CARHR255700 Cardamine hirsuta HOM05D012458 ORTHO05D014337 3.7e-51 205.3 144 79.2
Sp6g06590 Schrenkiella parvula HOM05D012458 ORTHO05D014337 1.5e-49 199.9 124 86.3
BcaB05g23873 Brassica carinata HOM05D012458 ORTHO05D014337 1.2e-46 190.3 144 76.4
A02p26440 Brassica napus HOM05D012458 ORTHO05D014337 3.1e-42 175.6 143 72.7
BraA02t07647Z Brassica rapa HOM05D012458 ORTHO05D014337 3.1e-42 175.6 143 72.7
C02p42040 Brassica napus HOM05D012458 ORTHO05D014337 5.3e-42 174.9 143 72.7
BolC2t10239H Brassica oleracea HOM05D012458 ORTHO05D014337 1.2e-41 173.7 143 72.0
BcaC03g16381 Brassica carinata HOM05D012458 ORTHO05D014337 1.1e-36 157.1 166 61.4
Aa31LG9G11210 Aethionema arabicum HOM05D012458 ORTHO05D014337 3.3e-36 155.6 152 60.5
THA.LOC104813045 Tarenaya hassleriana HOM05D012458 ORTHO05D014337 1.2e-20 104.0 174 46.0
Cpa.g.sc634.4 Carica papaya HOM05D002255 ORTHO05D002288 7.0e-10 68.2 158 32.9
Manes.02G008000 Manihot esculenta HOM05D002255 ORTHO05D002288 1.1e-07 60.8 50 56.0
ClCG07G011470 Citrullus lanatus HOM05D002255 ORTHO05D002288 1.9e-07 60.1 52 59.6
Peaxi162Scf00102g01853 Petunia axillaris HOM05D002255 ORTHO05D002288 2.5e-07 59.7 63 47.6
Hma1.2p1_0359F.1_g135100 Hydrangea macrophylla HOM05D002255 ORTHO05D002288 4.3e-07 58.9 57 50.9
Solyc08g008360.2 Solanum lycopersicum HOM05D002255 ORTHO05D002288 7.3e-07 58.2 86 38.4
ECA246G0612 Erigeron canadensis HOM05D002255 ORTHO05D002288 9.5e-07 57.8 46 60.9
TWI60G0014 Tripterygium wilfordii HOM05D002255 ORTHO05D002288 9.5e-07 57.8 44 63.6
Gohir.D03G084400 Gossypium hirsutum HOM05D002255 ORTHO05D002288 1.2e-06 57.4 63 46.0
Gorai.003G078200 Gossypium raimondii HOM05D002255 ORTHO05D002288 1.2e-06 57.4 63 46.0
Potri.001G089000 Populus trichocarpa HOM05D002255 ORTHO05D002288 1.2e-06 57.4 50 54.0
Sopen08g004240 Solanum pennellii HOM05D002255 ORTHO05D002288 1.2e-06 57.4 88 37.5
PGSC0003DMG400005843 Solanum tuberosum HOM05D002255 ORTHO05D002288 1.2e-06 57.4 86 39.5
Ca_17465_v3 Cicer arietinum L. HOM05D002255 ORTHO05D002288 1.6e-06 57.0 60 48.3
MBI06_g13416_MAGBIO Magnolia biondii HOM05D002255 ORTHO05D002288 1.6e-06 57.0 59 49.2
Nn1g00261 Nelumbo nucifera HOM05D002255 ORTHO05D002288 1.6e-06 57.0 170 32.4
Thecc.03G301000 Theobroma cacao HOM05D002255 ORTHO05D002288 1.6e-06 57.0 50 52.0
MELO3C016274.2 Cucumis melo HOM05D002255 ORTHO05D002288 2.8e-06 56.2 58 51.7
Eucgr.E00885 Eucalyptus grandis HOM05D002255 ORTHO05D002288 2.8e-06 56.2 51 51.0
CsaV3_4G006750 Cucumis sativus L. HOM05D002255 ORTHO05D002288 3.6e-06 55.8 51 56.9
Gohir.A02G099300 Gossypium hirsutum HOM05D002255 ORTHO05D002288 3.6e-06 55.8 63 44.4
Lj2P163T54 Lonicera japonica HOM05D002255 ORTHO05D002288 3.6e-06 55.8 52 55.8
HanXRQChr17g0534981 Helianthus annuus HOM05D002255 ORTHO05D002288 4.7e-06 55.5 50 56.0
Medtr8g099655 Medicago truncatula HOM05D002255 ORTHO05D002288 4.7e-06 55.5 58 50.0
Ciclev10023315m.g Citrus clementina HOM05D002255 ORTHO05D002288 6.2e-06 55.1 50 52.0
Sabra01G0065200 Salix brachista HOM05D002255 ORTHO05D002288 6.2e-06 55.1 50 52.0
CSS0015495 Camellia sinensis var. sinensis HOM05D002255 ORTHO05D002288 8.0e-06 54.7 55 49.1
CANSAT21G1974 Cannabis sativa HOM05D002255 ORTHO05D002288 8.0e-06 54.7 49 51.0
Lj4g0026828 Lotus japonicus HOM05D002255 ORTHO05D002288 8.0e-06 54.7 58 46.6
Rhsim02G0246900 Rhododendron simsii HOM05D002255 ORTHO05D002288 8.0e-06 54.7 51 52.9


User provided reference genes

Program Settings