Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10029394m.g Eutrema salsugineum HOM05D008434 ORTHO05D011150 1.0e-72 276.6 132 100.0
Thhalv10029127m.g Eutrema salsugineum HOM05D008434 ORTHO05D011150 9.9e-52 206.8 129 73.6
A02p09170 Brassica napus HOM05D008434 ORTHO05D011150 7.9e-49 197.2 129 71.3
BraA02t05984Z Brassica rapa HOM05D008434 ORTHO05D011150 7.9e-49 197.2 129 71.3
BcaC03g14230 Brassica carinata HOM05D008434 ORTHO05D011150 1.8e-48 196.1 129 70.5
AL4G24760 Arabidopsis lyrata HOM05D008434 ORTHO05D011150 2.3e-48 195.7 126 69.0
C02p15330 Brassica napus HOM05D008434 ORTHO05D011150 1.1e-47 193.4 129 70.5
BolC2t07649H Brassica oleracea HOM05D008434 ORTHO05D011150 1.1e-47 193.4 129 70.5
BcaB05g22263 Brassica carinata HOM05D008434 ORTHO05D011150 8.2e-46 187.2 129 66.7
BcaB01g02621 Brassica carinata HOM05D008434 ORTHO05D017634 4.3e-31 138.3 121 53.7
A09p38070 Brassica napus HOM05D008434 ORTHO05D011150 5.7e-31 137.9 132 48.5
BraA09t39317Z Brassica rapa HOM05D008434 ORTHO05D011150 5.7e-31 137.9 132 48.5
BraA09t38245Z Brassica rapa HOM05D008434 ORTHO05D024291 1.3e-30 136.7 128 53.9
A09p26730 Brassica napus HOM05D008434 ORTHO05D024291 2.2e-30 136.0 128 53.9
A03p29840 Brassica napus HOM05D008434 ORTHO05D011150 3.7e-30 135.2 132 48.5
A09p38090 Brassica napus HOM05D008434 ORTHO05D011150 3.7e-30 135.2 132 47.7
BraA09t39319Z Brassica rapa HOM05D008434 ORTHO05D011150 3.7e-30 135.2 132 47.7
BraA09t39320Z Brassica rapa HOM05D008434 ORTHO05D011150 3.7e-30 135.2 132 47.7
BraA09t39321Z Brassica rapa HOM05D008434 ORTHO05D011150 3.7e-30 135.2 132 47.7
BolC3t15919H Brassica oleracea HOM05D008434 ORTHO05D011150 4.8e-30 134.8 132 47.7
C03p36100 Brassica napus HOM05D008434 ORTHO05D011150 6.3e-30 134.4 132 47.7
BraA03t12174Z Brassica rapa HOM05D008434 ORTHO05D011150 8.2e-30 134.0 132 47.7
A09p38060 Brassica napus HOM05D008434 ORTHO05D011150 1.8e-29 132.9 132 46.2
BraA09t39316Z Brassica rapa HOM05D008434 ORTHO05D011150 1.8e-29 132.9 132 46.2
BraA09t39318Z Brassica rapa HOM05D008434 ORTHO05D011150 1.8e-29 132.9 132 47.0
A09p38080 Brassica napus HOM05D008434 ORTHO05D011150 2.4e-29 132.5 132 47.0
BcaC01g04576 Brassica carinata HOM05D008434 ORTHO05D011150 3.1e-29 132.1 124 48.4
A05p35910 Brassica napus HOM05D008434 ORTHO05D011150 9.1e-29 130.6 132 47.0
BraA05t22397Z Brassica rapa HOM05D008434 ORTHO05D011150 9.1e-29 130.6 132 47.0
BcaC04g21250 Brassica carinata HOM05D008434 ORTHO05D024291 2.6e-28 129.0 128 51.6
C09p33840 Brassica napus HOM05D008434 ORTHO05D024291 2.6e-28 129.0 128 51.6
BolC9t56222H Brassica oleracea HOM05D008434 ORTHO05D024291 2.6e-28 129.0 128 51.6
BcaC01g04573 Brassica carinata HOM05D008434 ORTHO05D017634 7.7e-28 127.5 121 48.8
A03p29850 Brassica napus HOM05D008434 ORTHO05D017634 7.7e-28 127.5 121 48.8
A08p08990 Brassica napus HOM05D008434 ORTHO05D017634 7.7e-28 127.5 121 48.8
C03p36120 Brassica napus HOM05D008434 ORTHO05D017634 7.7e-28 127.5 121 48.8
BolC3t15921H Brassica oleracea HOM05D008434 ORTHO05D017634 7.7e-28 127.5 121 48.8
Sp6g04890 Schrenkiella parvula HOM05D008434 ORTHO05D011150 1.3e-27 126.7 118 47.5
A09p38050 Brassica napus HOM05D008434 ORTHO05D017634 1.7e-27 126.3 121 49.6
BraA09t39315Z Brassica rapa HOM05D008434 ORTHO05D017634 1.7e-27 126.3 121 49.6
BraA03t12175Z Brassica rapa HOM05D008434 ORTHO05D017634 2.9e-27 125.6 121 48.8
Carub.0004s1109 Capsella rubella HOM05D008434 ORTHO05D011150 2.9e-27 125.6 133 48.9
BcaB01g01760 Brassica carinata HOM05D008434 ORTHO05D011150 2.3e-24 115.9 118 47.5
BraA08t32899Z Brassica rapa HOM05D008434 ORTHO05D108508 4.1e-21 105.1 107 46.7
Carub.0006s3190 Capsella rubella HOM05D008434 ORTHO05D011150 9.1e-21 104.0 119 44.5
AT4G12617 Arabidopsis thaliana HOM05D008434 ORTHO05D011150 2.0e-20 102.8 125 40.8
Carub.0006s3191 Capsella rubella HOM05D008434 ORTHO05D011150 2.0e-20 102.8 118 38.1
AL6G47580 Arabidopsis lyrata HOM05D008434 ORTHO05D011150 1.0e-19 100.5 124 39.5
AL6G47590 Arabidopsis lyrata HOM05D008434 ORTHO05D011150 1.2e-17 93.6 119 39.5
AT4G05630 Arabidopsis thaliana HOM05D008434 ORTHO05D011150 5.2e-16 88.2 117 36.8
Thhalv10029268m.g Eutrema salsugineum HOM05D008434 ORTHO05D195946 8.8e-16 87.4 119 39.5
BcaB01g02622 Brassica carinata HOM05D008434 ORTHO05D011150 8.2e-14 80.9 64 53.1
Carub.0006s3189 Capsella rubella HOM05D008434 ORTHO05D011150 1.6e-09 66.6 115 37.4
BraA09t39322Z Brassica rapa HOM05D008434 ORTHO05D011150 4.0e-08 62.0 69 46.4


User provided reference genes

Program Settings