Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 4.9e-75 284.6 172 100.0
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 3.0e-64 248.8 172 88.4
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 9.6e-63 243.8 172 87.2
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 9.6e-63 243.8 172 87.2
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 9.6e-63 243.8 172 87.2
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 1.4e-61 240.0 172 86.6
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 1.8e-61 239.6 177 86.4
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 4.9e-59 231.5 172 85.5
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 1.1e-58 230.3 172 86.0
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 2.4e-58 229.2 172 84.3
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 2.7e-57 225.7 172 84.3
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 2.7e-57 225.7 172 84.9
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 4.5e-52 208.4 131 81.7
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 1.5e-44 183.3 125 72.8
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 1.9e-34 149.8 133 58.6
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 3.5e-33 145.6 146 54.1
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 4.6e-33 145.2 125 60.8
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 1.3e-32 143.7 133 57.1
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 1.3e-32 143.7 122 58.2
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 5.1e-32 141.7 126 55.6
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 5.1e-32 141.7 126 55.6
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 8.7e-32 141.0 133 57.1
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 8.7e-32 141.0 149 52.3
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 1.5e-31 140.2 126 59.5
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 1.9e-31 139.8 125 57.6
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 5.7e-31 138.3 181 47.0
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 5.7e-31 138.3 175 46.9
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 5.7e-31 138.3 134 55.2
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 5.7e-31 138.3 146 54.8
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 9.7e-31 137.5 145 54.5
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 1.3e-30 137.1 133 54.9
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 2.2e-30 136.3 143 54.5
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 2.8e-30 136.0 133 53.4
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 1.4e-29 133.7 134 54.5
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 1.4e-29 133.7 125 54.4
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 3.1e-29 132.5 151 51.0
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 3.1e-29 132.5 148 50.0
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 5.3e-29 131.7 137 53.3
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 5.3e-29 131.7 148 51.4
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 5.3e-29 131.7 151 49.0
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 6.9e-29 131.3 140 52.1
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 9.0e-29 131.0 121 57.9
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 1.2e-28 130.6 131 55.7
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 1.2e-28 130.6 146 50.0
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 1.2e-28 130.6 127 55.1
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 1.5e-28 130.2 130 54.6
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 2.0e-28 129.8 134 53.0
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 2.0e-28 129.8 127 54.3
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 2.6e-28 129.4 118 56.8
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 3.4e-28 129.0 146 51.4
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 4.5e-28 128.6 118 57.6
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 4.5e-28 128.6 132 52.3
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 5.9e-28 128.3 129 54.3
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 1.7e-27 126.7 135 54.1
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 2.2e-27 126.3 137 51.1
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 2.2e-27 126.3 137 54.0
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 2.9e-27 125.9 134 52.2
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 3.8e-27 125.6 134 51.5
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 1.1e-26 124.0 131 52.7
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 1.1e-26 124.0 137 51.1
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 1.1e-26 124.0 137 51.1
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 4.2e-26 122.1 134 49.3
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 5.5e-26 121.7 129 56.6
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 9.3e-26 120.9 137 50.4
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 3.9e-24 115.5 144 50.0
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 5.1e-24 115.2 177 44.6
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 8.7e-24 114.4 121 55.4
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 2.2e-22 109.8 142 45.8
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 4.8e-22 108.6 179 50.3
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 4.1e-21 105.5 110 52.7
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 4.5e-20 102.1 131 45.8
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 5.9e-20 101.7 123 50.4
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 2.9e-19 99.4 133 48.9
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 3.8e-19 99.0 138 45.7
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 5.0e-19 98.6 136 47.8
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 6.5e-19 98.2 144 43.1
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 1.4e-18 97.1 132 44.7
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 2.5e-18 96.3 146 43.2
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 4.2e-18 95.5 124 49.2
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 1.0e-16 90.9 137 43.1
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 1.4e-16 90.5 135 43.0
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 8.8e-16 87.8 144 38.9
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 1.1e-15 87.4 124 43.5
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 4.4e-15 85.5 139 39.6
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 4.4e-15 85.5 131 43.5
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 1.7e-14 83.6 129 41.9
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 4.8e-14 82.0 135 43.0
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 2.4e-13 79.7 141 40.4
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 4.1e-13 79.0 74 62.2
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 6.9e-13 78.2 145 40.0
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 1.2e-12 77.4 141 39.7
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 1.2e-12 77.4 135 37.8
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 1.7e-11 73.6 140 37.1
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.1e-10 70.9 132 39.4
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 3.2e-10 69.3 136 38.2
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.8e-08 63.5 133 36.8
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 2.2e-06 56.6 32 87.5
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 2.2e-06 56.6 32 87.5
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 2.2e-06 56.6 32 87.5
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 3.7e-06 55.8 148 33.1
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 4.8e-06 55.5 31 87.1


User provided reference genes

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