Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 7.5e-93 344.0 189 100.0
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 6.6e-73 277.7 189 83.6
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 1.5e-69 266.5 188 79.3
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 1.4e-67 260.0 185 80.5
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 8.6e-65 250.8 186 76.3
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 9.5e-64 247.3 196 75.0
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 1.6e-63 246.5 190 72.6
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 2.1e-63 246.1 196 74.5
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 6.2e-63 244.6 185 75.1
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 8.0e-63 244.2 197 74.6
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 5.2e-62 241.5 192 75.0
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 1.4e-54 216.9 193 71.0
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 1.2e-50 203.8 191 66.0
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 1.2e-50 203.8 191 66.0
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 3.9e-49 198.7 195 64.6
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 3.3e-48 195.7 192 62.0
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 2.1e-47 193.0 195 63.6
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 2.1e-47 193.0 195 63.6
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 5.8e-37 158.3 187 52.4
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 1.9e-35 153.3 187 50.3
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 5.4e-35 151.8 181 54.7
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 9.3e-35 151.0 189 50.8
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 7.8e-34 147.9 199 51.3
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 2.3e-33 146.4 160 53.1
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 3.9e-33 145.6 162 57.4
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 6.6e-33 144.8 167 54.5
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 8.7e-33 144.4 182 49.5
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 1.5e-32 143.7 193 49.2
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 3.3e-32 142.5 190 51.6
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 3.3e-32 142.5 175 50.9
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 4.3e-32 142.1 171 51.5
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 5.6e-32 141.7 180 51.1
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 7.3e-32 141.4 187 51.3
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 7.3e-32 141.4 175 50.9
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 9.6e-32 141.0 189 49.7
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 1.3e-31 140.6 171 52.6
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 1.6e-31 140.2 160 56.9
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 2.1e-31 139.8 174 51.7
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 2.1e-31 139.8 182 51.1
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 2.8e-31 139.4 192 51.0
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 1.4e-30 137.1 180 48.3
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 1.4e-30 137.1 161 50.9
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 2.4e-30 136.3 223 45.3
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 5.3e-30 135.2 174 49.4
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 5.3e-30 135.2 192 47.9
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 5.3e-30 135.2 178 48.3
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 5.3e-30 135.2 189 49.2
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 1.5e-29 133.7 201 46.3
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 9.9e-29 131.0 191 50.3
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 1.3e-28 130.6 192 49.5
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 3.8e-28 129.0 151 51.7
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 3.8e-28 129.0 172 47.7
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 4.9e-28 128.6 172 50.0
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 1.1e-27 127.5 189 50.3
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 1.1e-27 127.5 189 50.3
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 1.9e-27 126.7 175 46.3
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 2.4e-27 126.3 158 52.5
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 2.4e-27 126.3 188 46.8
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 2.4e-27 126.3 180 46.7
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 3.2e-27 125.9 189 49.7
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 3.2e-27 125.9 184 47.8
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 5.4e-27 125.2 178 45.5
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 5.4e-27 125.2 163 53.4
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 9.3e-27 124.4 227 42.7
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 1.2e-26 124.0 158 52.5
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 1.6e-26 123.6 189 46.0
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 1.6e-26 123.6 152 52.6
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 2.1e-26 123.2 192 47.4
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 2.7e-26 122.9 228 40.4
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 4.6e-26 122.1 181 48.6
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 6.0e-26 121.7 184 48.4
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 1.3e-25 120.6 163 47.9
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 1.8e-25 120.2 174 47.7
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 2.3e-25 119.8 189 47.6
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 3.9e-25 119.0 159 48.4
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 5.1e-25 118.6 192 45.3
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 6.7e-25 118.2 192 44.3
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 8.7e-25 117.9 157 50.3
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 1.9e-24 116.7 187 44.9
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 1.9e-24 116.7 145 51.7
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 2.5e-24 116.3 191 46.1
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 4.3e-24 115.5 178 44.4
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 9.6e-24 114.4 231 39.8
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 1.3e-23 114.0 165 47.9
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 1.6e-23 113.6 190 46.8
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 3.7e-23 112.5 194 43.3
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 6.2e-23 111.7 188 42.6
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 6.2e-23 111.7 186 43.0
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 6.2e-23 111.7 206 39.8
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 8.1e-23 111.3 233 40.3
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 8.1e-23 111.3 188 45.7
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 1.1e-22 110.9 150 49.3
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 6.9e-22 108.2 141 48.9
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 1.5e-21 107.1 207 42.0
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 2.6e-21 106.3 204 38.7
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 4.5e-21 105.5 176 43.8
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 1.7e-20 103.6 185 42.7
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 8.4e-20 101.3 148 45.3
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 1.1e-19 100.9 206 39.8
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 1.0e-17 94.4 122 51.6
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 1.3e-17 94.0 148 43.9
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 9.6e-16 87.8 167 46.1
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 1.3e-15 87.4 127 46.5
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 3.7e-15 85.9 121 50.4
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 1.1e-14 84.3 156 40.4
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 2.4e-14 83.2 200 39.0
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 5.3e-14 82.0 173 35.3
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 1.2e-13 80.9 179 38.5
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 2.6e-13 79.7 115 46.1
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 1.1e-11 74.3 68 63.2
Actinidia21075 Actinidia chinensis HOM05D006618 ORTHO05D008291 1.4e-11 73.9 49 73.5
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 9.3e-11 71.2 151 37.7
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 1.0e-09 67.8 67 59.7
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 2.3e-09 66.6 112 41.1
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 6.7e-09 65.1 172 33.7
AagrBONN_evm.TU.Sc2ySwM_117.1999 Anthoceros agrestis HOM05D006618 ORTHO05D008291 8.7e-09 64.7 58 63.8
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 8.7e-09 64.7 146 37.0
SEGI_31360 Sequoiadendron giganteum HOM05D006618 ORTHO05D008291 1.3e-07 60.8 71 52.1
Mapoly0001s0215 Marchantia polymorpha HOM05D006618 ORTHO05D008291 2.2e-07 60.1 195 30.3


User provided reference genes

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