Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10028855m.g Eutrema salsugineum HOM05D012894 ORTHO05D014766 1.3e-149 533.1 292 100.0
A09p25830 Brassica napus HOM05D012894 ORTHO05D014766 6.5e-88 328.2 301 70.8
BraA09t38153Z Brassica rapa HOM05D012894 ORTHO05D014766 1.1e-87 327.4 300 70.3
BcaC04g21361 Brassica carinata HOM05D012894 ORTHO05D014766 4.2e-87 325.5 298 69.8
C09p32720 Brassica napus HOM05D012894 ORTHO05D014766 4.2e-87 325.5 298 69.8
BolC9t56115H Brassica oleracea HOM05D012894 ORTHO05D014766 4.2e-87 325.5 301 70.4
Sp6g03950 Schrenkiella parvula HOM05D012894 ORTHO05D014766 4.9e-83 312.0 299 63.5
BcaB01g01861 Brassica carinata HOM05D012894 ORTHO05D014766 5.9e-81 305.1 304 68.4
AT4G04990 Arabidopsis thaliana HOM05D012894 ORTHO05D014766 1.3e-72 277.3 327 56.6
AL6G48570 Arabidopsis lyrata HOM05D012894 ORTHO05D014766 4.3e-71 272.3 329 55.0
Carub.0006s3295 Capsella rubella HOM05D012894 ORTHO05D014766 2.6e-60 236.5 383 47.3
Aa31LG9G9450 Aethionema arabicum HOM05D012894 ORTHO05D014766 4.0e-37 159.5 297 41.4
THA.LOC104812765 Tarenaya hassleriana HOM05D012894 ORTHO05D014766 2.4e-26 123.6 288 42.4
CSS0030521 Camellia sinensis var. sinensis HOM05D001640 ORTHO05D001612 8.7e-08 62.0 118 37.3
CARHR051340 Cardamine hirsuta HOM05D001640 ORTHO05D001612 1.1e-07 61.6 111 36.9
Actinidia39410 Actinidia chinensis HOM05D001640 ORTHO05D001612 3.3e-07 60.1 116 37.1
CANSAT64G1354 Cannabis sativa HOM05D001640 ORTHO05D001612 3.3e-07 60.1 124 29.8
vmacro11814 Vaccinium macrocarpon HOM05D001640 ORTHO05D001612 3.3e-07 60.1 114 42.1
Cpa.g.sc27.111 Carica papaya HOM05D001640 ORTHO05D001612 1.3e-06 58.2 196 31.1
CDE05G3283 Ceratophyllum demersum HOM05D001640 ORTHO05D001612 1.3e-06 58.2 109 35.8
SalBow8G5059 Salvia bowleyana HOM05D001640 ORTHO05D001612 1.3e-06 58.2 171 32.2
Haze_09527 Corylus avellana HOM05D001640 ORTHO05D001612 1.6e-06 57.8 148 35.1
FAN21G3887 Fragaria x ananassa HOM05D001640 ORTHO05D001612 1.6e-06 57.8 123 35.8
Oeu043696.1 Olea europaea HOM05D001640 ORTHO05D001612 1.6e-06 57.8 114 36.0
Carub.0002s0389 Capsella rubella HOM05D001640 ORTHO05D001612 2.2e-06 57.4 123 35.8
MBI02_g35911_MAGBIO Magnolia biondii HOM05D001640 ORTHO05D001612 2.2e-06 57.4 116 36.2
Thhalv10023538m.g Eutrema salsugineum HOM05D001640 ORTHO05D001612 2.8e-06 57.0 112 37.5
RcHm_v2.0_Chr5g0035351 Rosa chinensis HOM05D001640 ORTHO05D001612 2.8e-06 57.0 142 34.5
Cfa020506 Carpinus fangiana HOM05D001640 ORTHO05D001612 3.7e-06 56.6 148 33.8
AL2G15050 Arabidopsis lyrata HOM05D001640 ORTHO05D001612 6.3e-06 55.8 164 29.9
MSTRG.15925 Avicennia marina HOM05D001640 ORTHO05D001612 6.3e-06 55.8 163 31.3
ClCG03G005570 Citrullus lanatus HOM05D001640 ORTHO05D001612 6.3e-06 55.8 114 36.0
FvH4_3g20920 Fragaria vesca HOM05D001640 ORTHO05D001612 6.3e-06 55.8 123 36.6
FAN11G1051 Fragaria x ananassa HOM05D001640 ORTHO05D001612 6.3e-06 55.8 123 36.6
Glyma.13G281600 Glycine max HOM05D001640 ORTHO05D001612 6.3e-06 55.8 109 37.6
HanXRQChr04g0125161 Helianthus annuus HOM05D001640 ORTHO05D001612 8.2e-06 55.5 52 59.6
HanXRQChr11g0330851 Helianthus annuus HOM05D001640 ORTHO05D001612 8.2e-06 55.5 159 32.1


User provided reference genes

Program Settings