Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 5.6e-195 684.1 348 100.0
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 9.0e-185 650.2 348 94.0
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 7.9e-181 637.1 348 91.7
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 1.0e-180 636.7 348 92.0
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 1.0e-180 636.7 348 92.0
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 1.3e-180 636.3 348 92.0
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 2.3e-180 635.6 346 93.4
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 4.3e-179 631.3 348 91.4
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 4.3e-179 631.3 351 92.3
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 5.6e-179 630.9 348 91.1
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 1.4e-177 626.3 350 91.7
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 5.8e-176 620.9 350 90.9
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 2.5e-166 589.0 348 83.6
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 1.8e-153 546.2 348 78.2
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 8.5e-151 537.3 343 77.3
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 1.9e-150 536.2 346 78.3
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 2.5e-150 535.8 348 77.0
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 3.2e-150 535.4 343 76.7
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 5.5e-150 534.6 342 77.5
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 7.2e-150 534.3 356 75.3
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 1.2e-149 533.5 340 77.9
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 2.1e-149 532.7 341 75.1
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 2.1e-149 532.7 351 75.2
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 2.7e-149 532.3 353 76.2
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 3.6e-149 531.9 351 75.5
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 4.6e-149 531.6 341 76.0
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 4.6e-149 531.6 343 76.1
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 7.9e-149 530.8 335 78.5
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 1.0e-148 530.4 351 75.5
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 1.8e-148 529.6 348 74.7
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 2.3e-148 529.3 346 76.9
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 5.1e-148 528.1 347 74.1
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 8.8e-148 527.3 341 76.0
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 2.5e-147 525.8 352 74.7
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 3.3e-147 525.4 346 75.7
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 3.3e-147 525.4 341 76.8
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 4.3e-147 525.0 346 75.7
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 4.3e-147 525.0 340 77.9
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 1.3e-146 523.5 333 76.6
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 1.3e-146 523.5 346 75.1
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 4.8e-146 521.5 341 76.0
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 4.8e-146 521.5 343 77.0
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 4.8e-146 521.5 335 76.4
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 8.2e-146 520.8 326 77.6
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 1.1e-145 520.4 348 74.1
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 1.1e-145 520.4 349 75.1
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 1.8e-145 519.6 345 75.9
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 1.8e-145 519.6 352 73.6
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 4.1e-145 518.5 352 73.3
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 4.1e-145 518.5 342 76.6
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 9.1e-145 517.3 344 75.0
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 1.2e-144 516.9 349 74.5
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 1.5e-144 516.5 339 74.0
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 1.5e-144 516.5 324 77.2
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 2.0e-144 516.2 321 78.5
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 2.6e-144 515.8 377 71.4
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 1.0e-143 513.8 346 74.6
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 2.2e-143 512.7 356 74.2
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 8.5e-143 510.8 346 72.8
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 2.5e-142 509.2 336 74.1
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 3.2e-142 508.8 341 74.5
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 5.5e-142 508.1 350 73.4
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 5.5e-142 508.1 343 72.3
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 7.2e-142 507.7 343 72.3
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 7.2e-142 507.7 395 66.1
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 1.2e-141 506.9 343 72.0
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 3.6e-141 505.4 349 71.6
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 2.6e-139 499.2 343 72.6
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 4.4e-139 498.4 310 78.7
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 7.4e-139 497.7 338 72.5
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 1.7e-138 496.5 355 70.7
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 6.3e-138 494.6 339 71.1
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 4.1e-137 491.9 335 71.3
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 5.3e-137 491.5 346 68.8
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 7.7e-136 487.6 346 68.2
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 2.9e-135 485.7 346 71.1
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 8.5e-135 484.2 351 68.7
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 1.6e-133 479.9 333 70.0
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 2.7e-133 479.2 349 72.2
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 2.7e-128 462.6 334 68.6
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 7.7e-128 461.1 346 66.5
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 4.2e-126 455.3 343 67.3
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 4.2e-126 455.3 340 65.3
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 5.5e-126 454.9 330 65.8
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 5.2e-124 448.4 263 83.3
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 6.1e-117 424.9 335 63.0
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 7.5e-115 417.9 343 63.8
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 2.8e-114 416.0 255 79.6
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.3e-111 407.1 362 62.4
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.3e-111 407.1 305 64.6
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 6.8e-108 394.8 350 61.4
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 4.9e-106 388.7 329 62.9
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 1.8e-105 386.7 234 79.9
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 8.6e-103 377.9 531 45.0
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 4.3e-102 375.6 343 58.6
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 8.9e-100 367.9 343 59.8
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 4.1e-97 359.0 222 79.3
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 8.6e-95 351.3 246 72.8
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 9.9e-83 311.2 190 78.9
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 5.4e-81 305.4 338 53.3
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 4.6e-72 275.8 163 77.9
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.3e-69 267.7 176 76.7
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 1.8e-68 263.8 387 39.5
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 8.4e-66 255.0 222 55.9
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 8.1e-61 238.4 319 42.6
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.4e-57 226.9 136 77.2
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 5.8e-51 205.7 127 80.3
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 1.3e-47 194.5 326 38.3
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 1.6e-45 187.6 343 34.4
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.5e-43 181.0 126 69.8
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 8.2e-37 158.7 97 72.2
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 4.5e-35 152.9 97 75.3
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 3.2e-33 146.7 78 84.6
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 2.9e-26 123.6 78 74.4
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 1.6e-24 117.9 62 83.9
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 5.5e-17 92.8 64 67.2
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 2.6e-14 84.0 56 80.4
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 2.9e-10 70.5 38 73.7
Os02g0581500 Oryza sativa ssp. japonica HOM05D003438 ORTHO05D004235 8.8e-07 58.9 281 23.1
SEGI_14439 Sequoiadendron giganteum HOM05D006459 ORTHO05D385787 2.6e-06 57.4 61 45.9
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 5.7e-06 56.2 143 30.8
Oeu025666.1 Olea europaea HOM05D000972 ORTHO05D007713 9.8e-06 55.5 281 26.7


User provided reference genes

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