Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 2.4e-122 442.2 222 100.0
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 1.3e-91 340.1 233 76.4
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 1.5e-89 333.2 215 76.7
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 5.0e-88 328.2 220 76.4
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 8.5e-88 327.4 227 74.0
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 5.5e-87 324.7 227 73.6
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 5.5e-87 324.7 227 73.6
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 5.5e-87 324.7 227 73.6
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 9.4e-87 323.9 227 73.6
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 1.2e-86 323.6 220 75.5
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 1.0e-85 320.5 227 73.1
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 5.1e-85 318.2 207 75.8
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 3.5e-81 305.4 211 72.0
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 6.5e-80 301.2 223 67.3
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 1.9e-79 299.7 214 69.2
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 1.6e-78 296.6 201 70.1
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 8.8e-77 290.8 199 70.9
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 1.1e-76 290.4 206 68.4
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 1.5e-76 290.0 223 62.3
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 2.6e-76 289.3 202 67.8
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 3.3e-76 288.9 199 68.3
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 4.4e-76 288.5 200 69.5
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 4.4e-76 288.5 200 68.0
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 1.3e-75 287.0 223 63.2
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 4.8e-75 285.0 216 64.4
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 1.8e-74 283.1 226 61.9
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 4.1e-74 282.0 208 64.9
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 5.3e-74 281.6 199 66.8
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 9.1e-74 280.8 198 66.7
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 2.0e-73 279.6 226 61.5
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 5.9e-73 278.1 236 58.5
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 7.7e-73 277.7 225 61.8
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 1.3e-72 276.9 225 62.2
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 2.2e-72 276.2 220 60.5
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 2.2e-72 276.2 204 64.7
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 2.9e-72 275.8 225 63.1
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 5.0e-72 275.0 215 63.3
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 6.5e-72 274.6 230 59.6
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 8.5e-72 274.2 203 64.0
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 1.5e-71 273.5 198 65.7
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 1.9e-71 273.1 229 59.4
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 3.2e-71 272.3 224 59.8
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 4.2e-71 271.9 224 59.4
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 4.2e-71 271.9 222 61.3
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 5.5e-71 271.6 222 61.3
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 7.2e-71 271.2 227 61.2
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 7.2e-71 271.2 206 61.7
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 7.2e-71 271.2 199 65.8
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 9.4e-71 270.8 224 58.9
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 9.4e-71 270.8 214 61.7
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 1.2e-70 270.4 206 64.1
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 1.2e-70 270.4 216 60.6
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 1.2e-70 270.4 199 66.8
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 1.2e-70 270.4 214 59.8
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 2.1e-70 269.6 205 63.4
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.7e-70 269.2 199 65.8
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 3.6e-70 268.9 235 58.7
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 4.7e-70 268.5 225 59.1
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.0e-69 267.3 235 58.3
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 1.8e-69 266.5 213 59.2
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 2.6e-68 262.7 197 61.9
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 3.4e-68 262.3 224 58.9
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 4.4e-68 261.9 225 56.9
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 5.7e-68 261.5 204 64.7
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 7.5e-68 261.2 237 58.6
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 1.7e-67 260.0 207 62.8
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 1.7e-67 260.0 223 61.9
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 2.2e-67 259.6 225 57.3
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 2.2e-67 259.6 202 63.9
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 2.8e-67 259.2 197 61.4
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 3.7e-67 258.8 190 63.7
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 6.3e-67 258.1 226 56.2
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 8.3e-67 257.7 199 62.3
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 1.1e-66 257.3 223 55.2
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 9.1e-66 254.2 236 55.9
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 2.0e-65 253.1 230 55.2
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 2.7e-65 252.7 204 61.3
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 3.8e-64 248.8 225 55.6
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 5.0e-64 248.4 223 56.1
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 6.5e-64 248.1 232 55.2
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 8.5e-64 247.7 204 58.8
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 8.5e-64 247.7 206 58.3
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.9e-63 246.5 197 58.4
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 3.6e-62 242.3 240 52.5
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 1.0e-61 240.7 198 56.1
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 1.0e-61 240.7 179 63.7
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 1.4e-61 240.4 198 57.6
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 8.8e-61 237.7 220 55.5
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 8.8e-61 237.7 291 46.0
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 4.9e-59 231.9 179 63.1
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 5.9e-57 224.9 225 52.9
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 1.3e-56 223.8 196 53.1
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 5.0e-56 221.9 157 66.9
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 7.3e-55 218.0 201 51.7
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 2.8e-54 216.1 198 52.5
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 4.0e-53 212.2 213 53.5
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.5e-52 210.3 176 60.2
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 2.2e-51 206.5 183 55.7
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 6.4e-51 204.9 210 45.7
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 1.6e-49 200.3 159 62.3
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.0e-48 197.6 157 63.1
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 1.4e-37 160.6 131 60.3
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.2e-36 157.5 113 65.5
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.2e-36 157.5 180 49.4
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 3.4e-36 156.0 136 53.7
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 2.2e-35 153.3 110 66.4
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.4e-34 150.6 110 67.3
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 6.0e-33 145.2 109 65.1
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 1.1e-26 124.4 93 65.6
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.4e-26 123.2 89 64.0
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.1e-25 120.2 87 66.7
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 5.1e-24 115.5 88 60.2
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 5.1e-24 115.5 84 69.0
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 2.8e-22 109.8 114 51.8
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 1.4e-21 107.5 79 62.0
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 1.4e-21 107.5 83 62.7
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 4.4e-20 102.4 72 66.7
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 1.7e-19 100.5 65 67.7
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 4.9e-19 99.0 95 54.7
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 7.3e-15 85.1 70 55.7
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 6.2e-14 82.0 70 57.1
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 6.2e-14 82.0 68 55.9
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 1.7e-11 73.9 67 55.2
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 9.6e-07 58.2 52 55.8


User provided reference genes

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