Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10028251m.g Eutrema salsugineum HOM05D009696 ORTHO05D000614 2.3e-76 288.9 155 100.0
Thhalv10028163m.g Eutrema salsugineum HOM05D009696 ORTHO05D000614 1.6e-40 169.9 97 91.8
Thhalv10028264m.g Eutrema salsugineum HOM05D009696 ORTHO05D000614 1.7e-39 166.4 97 91.8
AT1G66420 Arabidopsis thaliana HOM05D000538 ORTHO05D000614 1.1e-20 104.0 111 53.2
Thhalv10028244m.g Eutrema salsugineum HOM05D009696 ORTHO05D000614 6.9e-20 101.3 83 60.2
CARHR216080 Cardamine hirsuta HOM05D009696 ORTHO05D000614 3.4e-19 99.0 89 61.8
AL2G24230 Arabidopsis lyrata HOM05D000538 ORTHO05D000614 2.5e-17 92.8 90 53.3
BcaB06g27057 Brassica carinata HOM05D009696 ORTHO05D000614 1.3e-10 70.5 116 42.2
BcaC02g09545 Brassica carinata HOM05D009696 ORTHO05D000614 1.3e-10 70.5 131 38.9
Thhalv10023922m.g Eutrema salsugineum HOM05D009696 ORTHO05D000614 1.3e-10 70.5 81 48.1
C04p43960 Brassica napus HOM05D009696 ORTHO05D000614 1.7e-10 70.1 118 40.7
BolC4t25978H Brassica oleracea HOM05D009696 ORTHO05D014095 1.7e-10 70.1 118 40.7
C04p43940 Brassica napus HOM05D009696 ORTHO05D014095 2.9e-10 69.3 86 44.2
BcaC02g09544 Brassica carinata HOM05D009696 ORTHO05D000614 5.0e-10 68.6 118 39.8
BraA04t16712Z Brassica rapa HOM05D009696 ORTHO05D014095 6.5e-10 68.2 110 40.9
BcaC02g09542 Brassica carinata HOM05D009696 ORTHO05D014095 1.4e-09 67.0 119 39.5
A04p10480 Brassica napus HOM05D009696 ORTHO05D000614 1.4e-09 67.0 118 38.1
BraA04t16714Z Brassica rapa HOM05D009696 ORTHO05D014095 1.4e-09 67.0 118 38.1
BcaC02g09540 Brassica carinata HOM05D009696 ORTHO05D014095 2.5e-09 66.2 122 37.7
BcaC06g31859 Brassica carinata HOM05D000538 ORTHO05D000614 2.5e-09 66.2 119 37.8
C04p43970 Brassica napus HOM05D009696 ORTHO05D000614 4.2e-09 65.5 132 39.4
BcaB06g27058 Brassica carinata HOM05D009696 ORTHO05D000614 5.5e-09 65.1 121 36.4
BcaB07g31281 Brassica carinata HOM05D000538 ORTHO05D000614 9.4e-09 64.3 128 39.1
A04p10430 Brassica napus HOM05D009696 ORTHO05D014095 3.6e-08 62.4 110 40.0
A09p16670 Brassica napus HOM05D000538 ORTHO05D000614 3.6e-08 62.4 128 35.9
BraA09t37306Z Brassica rapa HOM05D000538 ORTHO05D000614 3.6e-08 62.4 128 35.9
CARHR216020 Cardamine hirsuta HOM05D000538 ORTHO05D000614 4.6e-08 62.0 109 38.5
BcaC02g10543 Brassica carinata HOM05D000538 ORTHO05D000614 6.1e-08 61.6 106 39.6
C04p27660 Brassica napus HOM05D000538 ORTHO05D000614 6.1e-08 61.6 106 39.6
BolC4t24311H Brassica oleracea HOM05D000538 ORTHO05D000614 6.1e-08 61.6 106 39.6
BcaC04g22347 Brassica carinata HOM05D000538 ORTHO05D000614 7.9e-08 61.2 128 35.2
C09p20300 Brassica napus HOM05D000538 ORTHO05D000614 7.9e-08 61.2 128 35.2
BolC9t54934H Brassica oleracea HOM05D000538 ORTHO05D000614 7.9e-08 61.2 128 35.2
Thhalv10023503m.g Eutrema salsugineum HOM05D000538 ORTHO05D000614 1.0e-07 60.8 83 43.4
AT4G00238 Arabidopsis thaliana HOM05D000538 ORTHO05D000614 1.4e-07 60.5 97 38.1
Carub.0003s3455 Capsella rubella HOM05D000538 ORTHO05D000614 1.8e-07 60.1 112 38.4
A03p67190 Brassica napus HOM05D000538 ORTHO05D000614 2.3e-07 59.7 115 35.7
BraA01t02756Z Brassica rapa HOM05D000538 ORTHO05D000614 2.3e-07 59.7 115 35.7
BcaB06g27059 Brassica carinata HOM05D009696 ORTHO05D000614 8.8e-07 57.8 129 32.6
BcaC07g37349 Brassica carinata HOM05D000538 ORTHO05D000614 1.5e-06 57.0 127 37.0
C08p07930 Brassica napus HOM05D000538 ORTHO05D000614 1.5e-06 57.0 113 39.8
BolC8t47645H Brassica oleracea HOM05D000538 ORTHO05D000614 1.5e-06 57.0 113 39.8
CARHR045900 Cardamine hirsuta HOM05D000538 ORTHO05D000614 2.0e-06 56.6 91 40.7
Sp2g02820 Schrenkiella parvula HOM05D000538 ORTHO05D000614 2.0e-06 56.6 93 41.9
AT2G01370 Arabidopsis thaliana HOM05D000538 ORTHO05D000614 2.5e-06 56.2 93 41.9
BcaC02g09543 Brassica carinata HOM05D009696 ORTHO05D000614 3.3e-06 55.8 80 41.2
BcaB04g17673 Brassica carinata HOM05D000538 ORTHO05D000614 4.3e-06 55.5 124 37.1
BcaB04g17674 Brassica carinata HOM05D000538 ORTHO05D000614 4.3e-06 55.5 124 37.1
BcaB03g16075 Brassica carinata HOM05D000538 ORTHO05D000614 7.4e-06 54.7 93 39.8
A04p10440 Brassica napus HOM05D009696 ORTHO05D014095 7.4e-06 54.7 121 34.7
BolC4t25976H Brassica oleracea HOM05D009696 ORTHO05D000614 7.4e-06 54.7 114 39.5
A01p30590 Brassica napus HOM05D000538 ORTHO05D000614 9.7e-06 54.3 115 36.5
BraA01t03191Z Brassica rapa HOM05D000538 ORTHO05D000614 9.7e-06 54.3 115 36.5


User provided reference genes

Program Settings