Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10027249m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 2.0e-52 208.8 101 100.0
Thhalv10027078m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 3.8e-35 151.4 98 77.6
Thhalv10023052m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 4.2e-26 121.3 104 62.5
CARHR176330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 5.7e-23 110.9 102 55.9
Thhalv10022969m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.4e-21 106.3 101 58.4
AT1G21866 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.3e-19 99.8 101 54.5
BolC1t05874H Brassica oleracea HOM05D006717 ORTHO05D008139 7.2e-18 94.0 100 53.0
BolC1t05876H Brassica oleracea HOM05D006717 ORTHO05D008139 7.2e-18 94.0 100 53.0
AL1G35060 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.2e-17 93.2 100 53.0
AT1G21864 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.2e-17 93.2 101 52.5
BolC3t17915H Brassica oleracea HOM05D006717 ORTHO05D008139 2.1e-17 92.4 100 52.0
BraA01t02119Z Brassica rapa HOM05D006717 ORTHO05D008139 2.1e-17 92.4 100 52.0
A06p17920 Brassica napus HOM05D006717 ORTHO05D008139 1.0e-16 90.1 101 52.5
BraA06t24882Z Brassica rapa HOM05D006717 ORTHO05D008139 1.0e-16 90.1 101 52.5
BraA10t42559Z Brassica rapa HOM05D006717 ORTHO05D008139 2.3e-16 89.0 100 50.0
CARHR022210 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.3e-16 89.0 101 45.5
BolC5t30782H Brassica oleracea HOM05D006717 ORTHO05D008139 6.7e-16 87.4 101 50.5
Thhalv10009497m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.6e-12 76.3 102 39.2
BolC8t50409H Brassica oleracea HOM05D006717 ORTHO05D008139 2.0e-12 75.9 97 48.5
CARHR022280 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.2e-11 72.4 97 42.3
AL1G35140 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.9e-11 72.0 102 41.2
Carub.0001s2140 Capsella rubella HOM05D006717 ORTHO05D008139 5.0e-11 71.2 107 38.3
AT1G21928 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.5e-11 70.5 105 39.0
AL1G35260 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.1e-10 70.1 102 40.2
AL1G35130 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.5e-10 68.9 101 42.6
AT1G21925 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.5e-10 68.9 105 37.1
AL1G35280 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 3.2e-10 68.6 102 40.2
BraA09t40040Z Brassica rapa HOM05D006717 ORTHO05D008139 7.2e-10 67.4 74 47.3
CARHR022850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 7.2e-10 67.4 66 51.5
AL1G35030 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 9.4e-10 67.0 93 41.9
CARHR213610 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.2e-09 66.6 102 40.2
Thhalv10009544m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 2.1e-09 65.9 69 47.8
AT1G34795 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.7e-09 64.7 67 46.3
AT1G34810 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.7e-09 64.7 67 46.3
AT1G34815 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.7e-09 64.7 67 46.3
AT1G34830 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.7e-09 64.7 67 46.3
A09p45790 Brassica napus HOM05D006717 ORTHO05D008139 4.7e-09 64.7 74 45.9
BraA10t45329Z Brassica rapa HOM05D006717 ORTHO05D008139 6.1e-09 64.3 99 41.4
Thhalv10009676m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 6.1e-09 64.3 66 48.5
Carub.0002s0633 Capsella rubella HOM05D006717 ORTHO05D008139 8.0e-09 63.9 66 48.5
A10p32920 Brassica napus HOM05D006717 ORTHO05D008139 1.0e-08 63.5 96 37.5
C09p73850 Brassica napus HOM05D006717 ORTHO05D008139 1.0e-08 63.5 97 39.2
C09p73860 Brassica napus HOM05D006717 ORTHO05D008139 1.0e-08 63.5 97 39.2
BolC9t60119H Brassica oleracea HOM05D006717 ORTHO05D008139 1.0e-08 63.5 97 39.2
Carub.0005s1133 Capsella rubella HOM05D006717 ORTHO05D008139 1.4e-08 63.2 71 46.5
CARHR022290 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.8e-08 62.8 99 38.4
AT1G21835 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.3e-08 62.4 70 45.7
AT1G34792 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.0e-08 61.6 67 44.8
AT1G34800 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.0e-08 61.6 67 44.8
AT1G34805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.0e-08 61.6 67 44.8
AT1G34820 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.0e-08 61.6 67 44.8
AT1G34825 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.0e-08 61.6 67 44.8
A09p33030 Brassica napus HOM05D006717 ORTHO05D008139 4.0e-08 61.6 66 47.0
BraA09t38844Z Brassica rapa HOM05D006717 ORTHO05D008139 4.0e-08 61.6 66 47.0
Thhalv10009885m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 4.0e-08 61.6 67 44.8
AL2G18250 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 5.2e-08 61.2 66 47.0
A09p32990 Brassica napus HOM05D006717 ORTHO05D008139 5.2e-08 61.2 66 47.0
A09p33020 Brassica napus HOM05D006717 ORTHO05D008139 5.2e-08 61.2 66 47.0
BraA09t38839Z Brassica rapa HOM05D006717 ORTHO05D008139 5.2e-08 61.2 66 47.0
BraA09t38843Z Brassica rapa HOM05D006717 ORTHO05D008139 5.2e-08 61.2 66 47.0
AT1G58248 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.1e-07 60.1 66 48.5
CARHR031850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.1e-07 60.1 69 42.0
AL2G18220 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.5e-07 59.7 66 48.5
BraA09t38826Z Brassica rapa HOM05D006717 ORTHO05D008139 2.6e-07 58.9 66 45.5
BraA09t38827Z Brassica rapa HOM05D006717 ORTHO05D008139 2.6e-07 58.9 66 45.5
Carub.0001s2130 Capsella rubella HOM05D006717 ORTHO05D008139 2.6e-07 58.9 71 45.1
Carub.0001s2131 Capsella rubella HOM05D006717 ORTHO05D008139 2.6e-07 58.9 102 36.3
Aa31LG7G5910 Aethionema arabicum HOM05D006717 ORTHO05D008139 3.3e-07 58.5 66 45.5
AL1G35270 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 3.3e-07 58.5 67 49.3
AT1G34860 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.3e-07 58.5 63 39.7
AT1G35035 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.4e-07 58.2 60 46.7
AT5G34828 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.4e-07 58.2 93 37.6
CARHR022300 Cardamine hirsuta HOM05D006717 ORTHO05D008139 4.4e-07 58.2 69 42.0
CARHR022330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 4.4e-07 58.2 71 40.8
AT1G58242 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.7e-07 57.8 93 37.6
BraA09t38828Z Brassica rapa HOM05D006717 ORTHO05D008139 5.7e-07 57.8 66 45.5
BraA06t26629Z Brassica rapa HOM05D006717 ORTHO05D008139 7.5e-07 57.4 66 47.0
AT1G34930 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 9.7e-07 57.0 63 39.7
A09p33000 Brassica napus HOM05D006717 ORTHO05D008139 9.7e-07 57.0 66 45.5
BraA09t38841Z Brassica rapa HOM05D006717 ORTHO05D008139 9.7e-07 57.0 66 45.5
BolC6t36416H Brassica oleracea HOM05D006717 ORTHO05D008139 1.3e-06 56.6 66 45.5
AL2G18240 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.7e-06 56.2 66 47.0
AT1G58245 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.7e-06 56.2 60 48.3
AT5G38378 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.7e-06 56.2 66 47.0
AT3G24465 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.2e-06 55.8 66 47.0
A07p14420 Brassica napus HOM05D006717 ORTHO05D008139 2.8e-06 55.5 64 45.3
Thhalv10009517m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 2.8e-06 55.5 101 39.6
A07p14410 Brassica napus HOM05D006717 ORTHO05D008139 6.3e-06 54.3 61 49.2
A09p33010 Brassica napus HOM05D006717 ORTHO05D008139 6.3e-06 54.3 58 48.3
BolC7t42647H Brassica oleracea HOM05D006717 ORTHO05D008139 6.3e-06 54.3 75 44.0
A07p14390 Brassica napus HOM05D006717 ORTHO05D008139 8.2e-06 53.9 61 47.5
BraA07t29193Z Brassica rapa HOM05D006717 ORTHO05D008139 8.2e-06 53.9 61 47.5


User provided reference genes

Program Settings