Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10026722m.g Eutrema salsugineum HOM05D007707 ORTHO05D009711 9.1e-34 146.4 75 100.0
Aa31LG6G12850 Aethionema arabicum HOM05D007707 ORTHO05D009711 4.2e-31 137.5 74 91.9
Sp7g33690 Schrenkiella parvula HOM05D007707 ORTHO05D009711 4.2e-31 137.5 78 91.0
CARHR244300 Cardamine hirsuta HOM05D007707 ORTHO05D009711 1.2e-30 136.0 77 92.2
BolC7t46567H Brassica oleracea HOM05D007707 ORTHO05D009711 3.6e-30 134.4 77 89.6
AL7G15140 Arabidopsis lyrata HOM05D007707 ORTHO05D009711 4.7e-30 134.0 78 89.7
AT4G35905 Arabidopsis thaliana HOM05D007707 ORTHO05D009711 1.4e-29 132.5 78 88.5
A03p63940 Brassica napus HOM05D007707 ORTHO05D009711 1.8e-29 132.1 77 88.3
BraA03t15463Z Brassica rapa HOM05D007707 ORTHO05D009711 1.8e-29 132.1 77 88.3
Carub.0007s0432 Capsella rubella HOM05D007707 ORTHO05D009711 1.1e-28 129.4 78 88.5
THA.LOC104804277 Tarenaya hassleriana HOM05D007707 ORTHO05D009711 1.1e-26 122.9 80 81.2
BcaNung05054 Brassica carinata HOM05D007707 ORTHO05D009711 3.5e-25 117.9 78 80.8
Hma1.2p1_0869F.1_g230620 Hydrangea macrophylla HOM05D007707 ORTHO05D009711 1.3e-24 115.9 75 76.0
COL.COLO4_22472 Corchorus olitorius HOM05D007707 ORTHO05D009711 2.9e-24 114.8 69 78.3
Ciclev10026827m.g Citrus clementina HOM05D007707 ORTHO05D009711 6.5e-24 113.6 68 79.4
CANSAT01G1439 Cannabis sativa HOM05D007707 ORTHO05D009711 8.5e-24 113.2 69 73.9
Manes.01G149600 Manihot esculenta HOM05D007707 ORTHO05D009711 8.5e-24 113.2 69 78.3
TWI73G0967 Tripterygium wilfordii HOM05D007707 ORTHO05D009711 1.1e-23 112.8 69 75.4
Ah.02g123290 Amaranthus hybridus HOM05D007707 ORTHO05D009711 1.9e-23 112.1 70 75.7
vmacro22198 Vaccinium macrocarpon HOM05D007707 ORTHO05D009711 1.9e-23 112.1 69 73.9
Dinv08562 Davidia involucrata HOM05D007707 ORTHO05D009711 3.2e-23 111.3 75 74.7
Gohir.A11G173000 Gossypium hirsutum HOM05D007707 ORTHO05D009711 5.5e-23 110.5 69 75.4
Thecc.01G013500 Theobroma cacao HOM05D007707 ORTHO05D009711 5.5e-23 110.5 69 75.4
Rhsim10G0207600 Rhododendron simsii HOM05D007707 ORTHO05D009711 7.2e-23 110.2 69 71.0
Cc07_g11150 Coffea canephora HOM05D007707 ORTHO05D009711 9.4e-23 109.8 76 73.7
Duzib147G0406 Durio zibethinus HOM05D007707 ORTHO05D009711 1.2e-22 109.4 69 73.9
Gohir.D11G180000 Gossypium hirsutum HOM05D007707 ORTHO05D009711 1.2e-22 109.4 69 73.9
Gorai.007G191900 Gossypium raimondii HOM05D007707 ORTHO05D009711 1.2e-22 109.4 69 73.9
Prupe.7G172900 Prunus persica HOM05D007707 ORTHO05D009711 1.2e-22 109.4 69 78.3
CiPaw.07G061600 Carya illinoinensis HOM05D007707 ORTHO05D009711 2.1e-22 108.6 69 75.4
Haze_03717 Corylus avellana HOM05D007707 ORTHO05D009711 2.7e-22 108.2 69 75.4
EL10Ac6g15163 Beta vulgaris HOM05D007707 ORTHO05D009711 6.1e-22 107.1 70 74.3
MELO3C007931.2 Cucumis melo HOM05D007707 ORTHO05D009711 8.0e-22 106.7 69 71.0
Cfa007014 Carpinus fangiana HOM05D007707 ORTHO05D009711 1.0e-21 106.3 69 75.4
ClCG01G020510 Citrullus lanatus HOM05D007707 ORTHO05D009711 1.8e-21 105.5 69 68.1
PGR102G1942 Punica granatum HOM05D007707 ORTHO05D009711 3.9e-21 104.4 69 75.4
AUR62018017 Chenopodium quinoa HOM05D007707 ORTHO05D009711 5.2e-21 104.0 70 71.4
MD15G1241100 Malus domestica HOM05D007707 ORTHO05D009711 6.7e-21 103.6 69 73.9
Nn6g31960 Nelumbo nucifera HOM05D007707 ORTHO05D009711 6.7e-21 103.6 69 73.9
Nitab4.5_0001685g0100 Nicotiana tabacum HOM05D007707 ORTHO05D009711 6.7e-21 103.6 69 69.6
QL06p051322 Quercus lobata HOM05D007707 ORTHO05D009711 6.7e-21 103.6 69 72.5
CsaV3_6G047390 Cucumis sativus L. HOM05D007707 ORTHO05D009711 1.5e-20 102.4 69 68.1
Nitab4.5_0001561g0120 Nicotiana tabacum HOM05D007707 ORTHO05D009711 2.6e-20 101.7 69 68.1
Glyma.11G079800 Glycine max HOM05D007707 ORTHO05D009711 5.7e-20 100.5 70 70.0
Sc16g0001900 Simmondsia chinensis HOM05D007707 ORTHO05D009711 9.7e-20 99.8 70 70.0
RcHm_v2.0_Chr2g0098761 Rosa chinensis HOM05D007707 ORTHO05D009711 1.7e-19 99.0 69 68.1
Glyma.01G163700 Glycine max HOM05D007707 ORTHO05D009711 2.2e-19 98.6 70 65.7
MBI08_g05062_MAGBIO Magnolia biondii HOM05D007707 ORTHO05D009711 2.2e-19 98.6 75 65.3
Sed0012149 Sechium edule HOM05D007707 ORTHO05D009711 2.2e-19 98.6 70 70.0
ECA246G5216 Erigeron canadensis HOM05D007707 ORTHO05D009711 4.8e-19 97.4 69 69.6
FAN19G0536 Fragaria x ananassa HOM05D007707 ORTHO05D009711 4.8e-19 97.4 69 66.7
Sabra15G0015600 Salix brachista HOM05D007707 ORTHO05D009711 4.8e-19 97.4 65 72.3
Phvul.002G105900 Phaseolus vulgaris HOM05D007707 ORTHO05D009711 6.3e-19 97.1 70 67.1
Lsat_1_v5_gn_3_71080 Lactuca sativa HOM05D007707 ORTHO05D009711 8.2e-19 96.7 69 69.6
Migut.J01748 Erythranthe guttata HOM05D007707 ORTHO05D009711 1.1e-18 96.3 69 68.1
FAN28G2511 Fragaria x ananassa HOM05D007707 ORTHO05D009711 1.1e-18 96.3 69 65.2
CAN.G354.55 Capsicum annuum HOM05D007707 ORTHO05D009711 1.8e-18 95.5 69 68.1
FAN23G0755 Fragaria x ananassa HOM05D007707 ORTHO05D009711 2.4e-18 95.1 67 67.2
Oeu056393.1 Olea europaea HOM05D007707 ORTHO05D009711 2.4e-18 95.1 74 58.1
Sopen03g006140 Solanum pennellii HOM05D007707 ORTHO05D009711 4.1e-18 94.4 69 68.1
Peaxi162Scf00635g00914 Petunia axillaris HOM05D007707 ORTHO05D009711 5.3e-18 94.0 69 66.7
Solyc03g033370.3 Solanum lycopersicum HOM05D007707 ORTHO05D009711 5.3e-18 94.0 69 66.7
TPR.G10525 Trifolium pratense HOM05D007707 ORTHO05D009711 9.1e-18 93.2 70 62.9
Lj2g0020635 Lotus japonicus HOM05D007707 ORTHO05D009711 1.2e-17 92.8 74 59.5
Psat2g152640 Pisum sativum HOM05D007707 ORTHO05D009711 1.2e-17 92.8 70 62.9
Actinidia22948 Actinidia chinensis HOM05D007707 ORTHO05D009711 3.5e-17 91.3 60 71.7
Medtr5g022760 Medicago truncatula HOM05D007707 ORTHO05D009711 5.9e-17 90.5 75 60.0
SGA_v2.0_scaffold36G14291 Striga asiatica HOM05D007707 ORTHO05D009711 1.0e-16 89.7 70 64.3
Lalb_Chr09g0321541 Lupinus albus HOM05D007707 ORTHO05D009711 2.2e-16 88.6 65 64.6
arahy.Tifrunner.gnm1.ann1.LEB2TA Arachis hypogaea HOM05D007707 ORTHO05D009711 2.9e-16 88.2 55 70.9
arahy.Tifrunner.gnm1.ann1.URRP40 Arachis hypogaea HOM05D007707 ORTHO05D009711 2.9e-16 88.2 55 70.9
CDE05G2854 Ceratophyllum demersum HOM05D007707 ORTHO05D009711 1.9e-15 85.5 69 62.3
DCAR_011610 Daucus carota HOM05D007707 ORTHO05D009711 1.9e-15 85.5 69 62.3
GSVIVG01006523001 Vitis vinifera HOM05D007707 ORTHO05D009711 1.9e-15 85.5 53 77.4
Zm00001eb222710 Zea mays HOM05D007707 ORTHO05D009711 5.5e-15 84.0 70 58.6
Os10g0438700 Oryza sativa ssp. japonica HOM05D007707 ORTHO05D009711 4.7e-14 80.9 78 53.8
Hund14067 Selenicereus undatus HOM05D007707 ORTHO05D009711 1.8e-13 79.0 54 68.5
arahy.Tifrunner.gnm1.ann1.04LXIS Arachis hypogaea HOM05D000001 ORTHO05D009700 2.3e-13 78.6 55 65.5
C07p61410 Brassica napus HOM05D007707 ORTHO05D009711 2.3e-13 78.6 43 90.7
ATR0180G024 Amborella trichopoda HOM05D007707 ORTHO05D009711 3.0e-13 78.2 52 67.3
Pp3c14_18830 Physcomitrium patens HOM05D007707 ORTHO05D009711 3.0e-13 78.2 57 56.1
PGSC0003DMG400022552 Solanum tuberosum HOM05D007707 ORTHO05D009711 2.8e-11 71.6 52 69.2
Mapoly0124s0029 Marchantia polymorpha HOM05D007707 ORTHO05D009711 3.7e-11 71.2 62 53.2
Eucgr.J02480 Eucalyptus grandis HOM05D007707 ORTHO05D009711 8.3e-11 70.1 58 65.5
FvH4_1g11290 Fragaria vesca HOM05D007707 ORTHO05D009711 7.0e-10 67.0 53 62.3
HanXRQChr09g0245181 Helianthus annuus HOM05D007707 ORTHO05D009711 1.0e-08 63.2 52 67.3
SEGI_22054 Sequoiadendron giganteum HOM05D007707 ORTHO05D009711 1.0e-08 63.2 53 52.8
HPP92_020736 Vanilla planifolia HOM05D007707 ORTHO05D009711 8.5e-08 60.1 52 59.6
Oeu060284.1 Olea europaea HOM05D007707 ORTHO05D009711 1.5e-07 59.3 70 48.6
CSS0044701 Camellia sinensis var. sinensis HOM05D007707 ORTHO05D009711 3.2e-07 58.2 35 62.9
SalBow2G3201 Salvia bowleyana HOM05D007707 ORTHO05D009711 9.4e-07 56.6 34 73.5
Dinv40127 Davidia involucrata HOM05D007707 ORTHO05D009711 6.1e-06 53.9 52 53.8


User provided reference genes

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