Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10026664m.g Eutrema salsugineum HOM05D012071 ORTHO05D013970 5.8e-25 117.5 96 100.0
Sp7g19100 Schrenkiella parvula HOM05D012071 ORTHO05D013970 3.6e-19 98.2 96 84.4
BcaC09g51267 Brassica carinata HOM05D012071 ORTHO05D013970 5.2e-18 94.4 97 86.6
C01p14990 Brassica napus HOM05D012071 ORTHO05D013970 7.6e-17 90.5 96 59.4
BcaNung04703 Brassica carinata HOM05D012071 ORTHO05D013970 9.9e-17 90.1 97 76.3
Carub.0007s2040 Capsella rubella HOM05D012071 ORTHO05D013970 1.4e-15 86.3 100 82.0
AL7G33090 Arabidopsis lyrata HOM05D012071 ORTHO05D013970 2.7e-14 82.0 96 68.8
AT4G21060 Arabidopsis thaliana HOM05D000777 ORTHO05D000595 6.0e-14 80.9 41 100.0
CARHR227630 Cardamine hirsuta HOM05D012071 ORTHO05D013970 1.7e-13 79.3 41 97.6
C07p51060 Brassica napus HOM05D012071 ORTHO05D013970 3.9e-13 78.2 83 80.7
BraA03t14336Z Brassica rapa HOM05D012071 ORTHO05D013970 3.9e-13 78.2 83 85.5
A01p12410 Brassica napus HOM05D000777 ORTHO05D000595 5.1e-13 77.8 41 97.6
A03p52620 Brassica napus HOM05D012071 ORTHO05D013970 5.1e-13 77.8 41 97.6
BolC1t01447H Brassica oleracea HOM05D000777 ORTHO05D000595 5.1e-13 77.8 41 97.6
BraA01t01187Z Brassica rapa HOM05D000777 ORTHO05D000595 5.1e-13 77.8 41 97.6
BolC7t45606H Brassica oleracea HOM05D012071 ORTHO05D013970 2.5e-12 75.5 83 78.3
Aa31LG6G3080 Aethionema arabicum HOM05D012071 ORTHO05D013970 5.6e-12 74.3 41 90.2
AL1G44210 Arabidopsis lyrata HOM05D006325 ORTHO05D007878 1.7e-08 62.8 97 43.3
A08p15420 Brassica napus HOM05D012071 ORTHO05D013970 1.7e-08 62.8 34 91.2
BraA09t39151Z Brassica rapa HOM05D006325 ORTHO05D007878 8.4e-08 60.5 99 44.4
A09p36260 Brassica napus HOM05D006325 ORTHO05D007878 1.1e-07 60.1 100 44.0
Sp1g26100 Schrenkiella parvula HOM05D006325 ORTHO05D007878 1.4e-07 59.7 97 44.3
BcaC05g27053 Brassica carinata HOM05D006325 ORTHO05D007878 2.4e-07 58.9 100 43.0
BolC5t31641H Brassica oleracea HOM05D006325 ORTHO05D007878 2.4e-07 58.9 100 43.0
BcaB07g32625 Brassica carinata HOM05D006325 ORTHO05D007878 5.4e-07 57.8 99 42.4
AT1G30260 Arabidopsis thaliana HOM05D006325 ORTHO05D007878 7.1e-07 57.4 41 75.6
C05p29100 Brassica napus HOM05D006325 ORTHO05D007878 7.1e-07 57.4 41 75.6
Ciclev10017179m.g Citrus clementina HOM05D006325 ORTHO05D007878 1.2e-06 56.6 98 44.9
Aa31LG6G5500 Aethionema arabicum HOM05D006325 ORTHO05D007878 1.6e-06 56.2 96 63.5
BcaB03g11702 Brassica carinata HOM05D012071 ORTHO05D013970 1.6e-06 56.2 32 87.5
Sopen07g002010 Solanum pennellii HOM05D006325 ORTHO05D007878 1.6e-06 56.2 93 39.8
Carub.0001s2849 Capsella rubella HOM05D006325 ORTHO05D007878 2.1e-06 55.8 41 73.2
Thhalv10009295m.g Eutrema salsugineum HOM05D006325 ORTHO05D007878 2.1e-06 55.8 41 73.2
CARHR029650 Cardamine hirsuta HOM05D006325 ORTHO05D007878 2.7e-06 55.5 41 70.7
BcaB03g13839 Brassica carinata HOM05D006325 ORTHO05D007878 4.6e-06 54.7 41 73.2
BcaC06g35496 Brassica carinata HOM05D006325 ORTHO05D007878 4.6e-06 54.7 41 73.2
A07p10030 Brassica napus HOM05D006325 ORTHO05D007878 4.6e-06 54.7 41 73.2
BolC7t42032H Brassica oleracea HOM05D006325 ORTHO05D007878 4.6e-06 54.7 41 73.2
BraA07t28796Z Brassica rapa HOM05D006325 ORTHO05D007878 4.6e-06 54.7 41 73.2
Prupe.4G084800 Prunus persica HOM05D006325 ORTHO05D007878 4.6e-06 54.7 97 53.6
Nitab4.5_0003551g0110 Nicotiana tabacum HOM05D006325 ORTHO05D007878 6.0e-06 54.3 41 73.2
Manes.17G073700 Manihot esculenta HOM05D006325 ORTHO05D007878 7.8e-06 53.9 96 52.1


User provided reference genes

Program Settings