Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 8.9e-84 313.5 155 100.0
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 8.9e-68 260.4 156 84.6
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 6.4e-66 254.2 156 84.6
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 1.9e-65 252.7 155 83.9
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 1.9e-65 252.7 155 83.2
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 1.2e-64 250.0 157 83.4
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 1.2e-64 250.0 156 84.6
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 1.2e-64 250.0 157 83.4
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 3.5e-64 248.4 155 82.6
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 4.6e-64 248.1 157 82.8
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 4.6e-64 248.1 155 85.2
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 4.6e-64 248.1 157 81.5
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 1.3e-63 246.5 158 82.9
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 1.3e-63 246.5 158 82.9
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 1.7e-63 246.1 157 82.2
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 1.9e-62 242.7 156 82.7
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 4.3e-62 241.5 157 80.9
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 9.5e-54 213.8 109 96.3
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 8.4e-50 200.7 151 69.5
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 1.2e-40 170.2 146 63.7
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 1.9e-38 162.9 145 62.1
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 2.5e-38 162.5 102 77.5
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 9.6e-38 160.6 119 68.9
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 1.3e-37 160.2 102 76.5
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 1.3e-37 160.2 111 73.0
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 1.6e-37 159.8 142 59.2
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 3.6e-37 158.7 104 76.9
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 4.8e-37 158.3 143 62.9
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 4.8e-37 158.3 93 80.6
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 6.2e-37 157.9 139 61.9
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 8.1e-37 157.5 97 75.3
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 8.1e-37 157.5 98 77.6
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 8.1e-37 157.5 93 78.5
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 1.1e-36 157.1 93 78.5
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 1.4e-36 156.8 111 70.3
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 1.8e-36 156.4 112 69.6
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 2.4e-36 156.0 93 78.5
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 2.4e-36 156.0 119 67.2
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 3.1e-36 155.6 129 65.1
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 4.0e-36 155.2 128 62.5
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 5.3e-36 154.8 111 71.2
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 5.3e-36 154.8 100 74.0
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 6.9e-36 154.5 94 77.7
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 6.9e-36 154.5 142 57.0
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 9.0e-36 154.1 142 56.3
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 9.0e-36 154.1 103 76.7
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 1.2e-35 153.7 103 70.9
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 1.5e-35 153.3 100 76.0
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 2.0e-35 152.9 93 79.6
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 2.0e-35 152.9 109 68.8
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 2.6e-35 152.5 131 61.8
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 2.6e-35 152.5 153 53.6
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 2.6e-35 152.5 107 71.0
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 3.4e-35 152.1 83 85.5
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 3.4e-35 152.1 86 82.6
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 4.5e-35 151.8 88 80.7
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 4.5e-35 151.8 94 75.5
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 4.5e-35 151.8 114 67.5
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 4.5e-35 151.8 97 72.2
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 4.5e-35 151.8 93 77.4
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 9.9e-35 150.6 90 76.7
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 9.9e-35 150.6 118 66.1
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 1.3e-34 150.2 100 75.0
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 1.3e-34 150.2 83 83.1
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 1.7e-34 149.8 153 55.6
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 1.7e-34 149.8 146 55.5
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 2.2e-34 149.4 103 71.8
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 2.9e-34 149.1 109 71.6
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 2.9e-34 149.1 87 80.5
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 4.9e-34 148.3 109 66.1
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 6.4e-34 147.9 122 60.7
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 6.4e-34 147.9 101 70.3
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 1.4e-33 146.7 91 73.6
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 1.4e-33 146.7 91 73.6
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 1.4e-33 146.7 143 53.8
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 1.4e-33 146.7 109 69.7
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 1.9e-33 146.4 102 71.6
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 3.2e-33 145.6 127 61.4
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 3.2e-33 145.6 95 73.7
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 4.2e-33 145.2 81 81.5
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 4.2e-33 145.2 108 67.6
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 1.6e-32 143.3 91 70.3
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 1.6e-32 143.3 115 66.1
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 2.1e-32 142.9 82 80.5
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 2.7e-32 142.5 91 70.3
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 2.7e-32 142.5 83 80.7
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 4.6e-32 141.7 81 81.5
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 6.0e-32 141.4 108 67.6
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 6.0e-32 141.4 100 69.0
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 1.5e-30 136.7 103 73.8
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 1.5e-30 136.7 113 62.8
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 7.4e-30 134.4 111 63.1
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 1.4e-28 130.2 71 81.7
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 2.2e-26 122.9 106 60.4
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 4.9e-26 121.7 149 47.0
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 1.4e-25 120.2 68 77.9
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 2.5e-25 119.4 104 56.7
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 9.3e-25 117.5 121 56.2
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 1.0e-23 114.0 90 65.6
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 1.9e-22 109.8 76 67.1
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 4.3e-22 108.6 101 58.4
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 4.8e-21 105.1 79 63.3
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 1.2e-19 100.5 115 52.2
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 7.6e-19 97.8 56 82.1
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 1.1e-14 84.0 76 63.2
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 4.1e-12 75.5 55 69.1


User provided reference genes

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