Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 6.8e-147 523.9 245 100.0
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 6.4e-137 490.7 247 92.3
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 1.8e-131 472.6 246 89.4
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 2.4e-131 472.2 259 85.3
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 1.7e-129 466.1 259 84.6
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 3.8e-129 464.9 246 88.2
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 4.2e-128 461.5 246 87.0
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 2.1e-127 459.1 260 83.8
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 4.8e-124 448.0 272 77.9
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 9.0e-123 443.7 248 82.7
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 1.9e-120 436.0 238 86.1
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 1.9e-120 436.0 238 86.1
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 2.0e-114 416.0 238 84.9
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 2.0e-114 416.0 247 80.2
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 6.5e-105 384.4 205 88.3
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 6.5e-105 384.4 205 88.3
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 3.5e-103 378.6 221 82.4
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 8.7e-102 374.0 208 86.1
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 3.7e-92 342.0 238 73.1
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 2.5e-88 329.3 233 64.8
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 7.9e-87 324.3 247 64.0
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 2.3e-86 322.8 246 61.8
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 4.4e-85 318.5 246 61.4
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 2.8e-84 315.8 243 60.1
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 1.4e-83 313.5 247 61.1
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 1.5e-82 310.1 243 59.7
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 4.5e-82 308.5 244 61.5
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 7.7e-82 307.8 240 61.7
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 7.7e-82 307.8 251 61.8
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 1.0e-81 307.4 229 65.1
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 1.0e-81 307.4 245 61.6
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 1.7e-81 306.6 245 61.2
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 2.2e-81 306.2 247 59.1
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 5.0e-81 305.1 246 60.6
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 8.5e-81 304.3 245 60.8
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 2.5e-80 302.8 239 61.1
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 5.5e-80 301.6 246 57.3
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 7.2e-80 301.2 245 60.8
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 2.7e-79 299.3 248 59.7
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 4.7e-79 298.5 250 58.8
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 1.0e-78 297.4 241 57.7
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 2.3e-78 296.2 192 68.2
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 3.0e-78 295.8 244 59.0
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 5.2e-78 295.0 252 57.5
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 6.7e-78 294.7 224 62.5
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 8.8e-78 294.3 247 56.7
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 1.5e-77 293.5 235 59.1
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 1.5e-77 293.5 221 61.5
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 1.5e-77 293.5 241 57.3
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 2.0e-77 293.1 242 58.7
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 2.0e-77 293.1 206 66.5
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 3.3e-77 292.4 237 57.0
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 7.4e-77 291.2 242 59.9
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 7.4e-77 291.2 247 57.1
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 7.4e-77 291.2 239 60.7
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 6.3e-76 288.1 252 59.5
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 6.3e-76 288.1 264 54.5
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 8.2e-76 287.7 243 56.8
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 8.2e-76 287.7 225 61.8
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 1.4e-75 287.0 233 59.2
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 1.8e-75 286.6 252 59.1
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 2.4e-75 286.2 200 65.5
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 3.1e-75 285.8 248 57.7
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 3.1e-75 285.8 248 57.7
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 4.1e-75 285.4 221 60.6
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 7.0e-75 284.6 204 64.2
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 1.2e-74 283.9 219 60.7
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 2.0e-74 283.1 224 59.4
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 5.9e-74 281.6 221 59.7
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 2.9e-73 279.3 274 52.2
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 2.9e-73 279.3 209 60.8
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 8.5e-73 277.7 243 57.6
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 1.1e-72 277.3 238 55.9
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 1.9e-72 276.6 267 54.7
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 2.5e-72 276.2 245 57.1
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 2.5e-72 276.2 197 61.9
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 3.2e-72 275.8 241 57.7
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 7.2e-72 274.6 246 55.3
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 7.2e-72 274.6 221 58.4
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 9.4e-72 274.2 247 55.1
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 1.2e-71 273.9 241 56.4
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 1.6e-71 273.5 226 58.4
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 3.6e-71 272.3 205 62.9
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 3.6e-71 272.3 225 56.4
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 4.7e-71 271.9 252 53.6
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 6.1e-71 271.6 199 61.8
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 8.0e-71 271.2 236 55.5
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 3.0e-70 269.2 210 59.5
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 1.5e-69 266.9 204 62.3
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 4.4e-69 265.4 215 60.0
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 7.5e-69 264.6 247 53.0
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 3.7e-68 262.3 215 60.0
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 2.0e-66 256.5 239 52.7
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 3.5e-66 255.8 226 55.3
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 5.9e-66 255.0 239 52.7
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.9e-65 252.7 202 61.4
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 2.9e-65 252.7 247 51.8
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 3.8e-65 252.3 202 61.4
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 3.8e-65 252.3 202 61.4
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 5.0e-65 251.9 237 55.3
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 6.5e-65 251.5 202 61.4
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 4.2e-64 248.8 210 55.7
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 7.2e-64 248.1 235 51.5
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 3.6e-63 245.7 185 60.0
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 1.0e-62 244.2 205 56.6
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 1.8e-59 233.4 213 54.9
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 2.0e-58 229.9 213 53.5
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 2.1e-55 219.9 175 58.9
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 6.8e-54 214.9 198 51.0
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 9.8e-53 211.1 151 60.9
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 3.7e-52 209.1 194 51.0
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 3.1e-51 206.1 160 60.6
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 5.6e-48 195.3 159 56.6
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 7.3e-40 168.3 122 57.4
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 3.5e-34 149.4 124 51.6
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.3e-33 147.5 121 52.9
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 7.3e-32 141.7 82 65.9
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 8.9e-30 134.8 102 53.9
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 2.1e-26 123.6 89 57.3
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.7e-12 77.4 179 33.5


User provided reference genes

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