Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 5.1e-207 724.2 361 100.0
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 5.1e-175 617.8 361 87.0
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 1.5e-174 616.3 362 84.0
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 2.8e-173 612.1 364 85.4
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 1.5e-158 563.1 354 81.9
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 3.3e-158 562.0 327 85.6
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 2.8e-149 532.3 366 78.4
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 3.2e-145 518.8 350 78.9
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 9.4e-145 517.3 349 77.4
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 1.6e-144 516.5 351 76.9
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 4.5e-131 471.9 362 68.8
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 1.9e-121 439.9 369 64.0
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 2.9e-109 399.4 318 61.3
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 2.3e-106 389.8 356 54.2
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 1.9e-105 386.7 317 59.6
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 2.1e-104 383.3 336 56.2
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 2.0e-102 376.7 326 58.9
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 4.4e-102 375.6 367 52.6
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 5.8e-102 375.2 337 55.8
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 5.8e-102 375.2 348 55.2
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 1.3e-101 374.0 338 55.9
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 2.9e-101 372.9 364 52.7
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 8.3e-101 371.3 321 57.3
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 1.4e-100 370.5 338 55.6
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 1.4e-100 370.5 336 55.4
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 2.4e-100 369.8 331 55.6
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 3.2e-100 369.4 377 52.0
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 9.2e-100 367.9 365 52.6
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 1.6e-99 367.1 289 59.5
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 2.7e-99 366.3 321 56.4
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 7.8e-99 364.8 349 54.2
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 1.0e-98 364.4 364 52.5
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 5.1e-98 362.1 342 51.2
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 6.6e-98 361.7 364 51.9
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 6.6e-98 361.7 315 56.5
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 2.5e-97 359.8 295 58.6
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 3.3e-97 359.4 290 59.3
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 4.3e-97 359.0 346 51.4
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 7.3e-97 358.2 324 55.9
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 4.7e-96 355.5 287 58.5
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 8.1e-96 354.8 340 51.8
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 1.1e-95 354.4 329 53.2
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 1.4e-95 354.0 295 58.3
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 1.8e-95 353.6 301 56.8
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 1.8e-95 353.6 351 52.4
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 2.3e-95 353.2 349 55.9
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 2.3e-95 353.2 338 52.1
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 1.5e-94 350.5 323 53.6
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 2.0e-94 350.1 321 51.7
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 2.6e-94 349.7 329 52.6
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 3.4e-94 349.4 334 52.1
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 4.4e-94 349.0 289 58.1
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 9.9e-94 347.8 326 52.5
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 1.7e-93 347.1 290 56.9
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 2.9e-93 346.3 295 56.9
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 3.8e-93 345.9 278 60.8
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 6.4e-93 345.1 295 57.6
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 1.1e-92 344.4 276 60.5
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 1.9e-92 343.6 346 51.2
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 3.2e-92 342.8 295 56.9
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 5.4e-92 342.0 325 53.2
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 9.2e-92 341.3 334 54.8
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 3.5e-91 339.3 318 51.9
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 4.6e-91 339.0 347 52.7
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 6.0e-91 338.6 320 54.7
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 7.8e-91 338.2 277 60.3
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 7.8e-91 338.2 308 54.9
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 1.0e-90 337.8 293 56.0
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 2.3e-90 336.7 292 56.2
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 5.1e-90 335.5 284 56.7
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 5.1e-90 335.5 366 48.1
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 8.6e-90 334.7 287 57.5
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 9.6e-89 331.3 351 49.6
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 4.7e-88 328.9 289 54.7
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 1.8e-87 327.0 294 53.1
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 4.0e-87 325.9 323 50.2
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 1.2e-86 324.3 320 52.2
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 1.9e-84 317.0 324 50.9
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 1.9e-84 317.0 298 53.7
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 9.3e-84 314.7 354 49.4
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 6.0e-83 312.0 353 49.3
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 2.3e-82 310.1 337 49.0
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 2.1e-80 303.5 323 49.8
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 6.2e-80 302.0 308 50.0
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 4.5e-78 295.8 330 46.4
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 7.6e-78 295.0 259 57.9
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 1.8e-74 283.9 343 48.7
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 7.4e-73 278.5 326 45.4
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 6.9e-71 271.9 236 56.4
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 4.5e-70 269.2 240 63.8
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 2.4e-68 263.5 255 52.5
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 5.5e-68 262.3 243 53.5
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 5.3e-55 219.2 315 40.6
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 5.0e-53 212.6 329 35.3
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 4.5e-46 189.5 300 37.7
SMO356G0187 Selaginella moellendorffii HOM05D007297 ORTHO05D009352 2.5e-44 183.7 294 34.7
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 7.2e-44 182.2 151 55.6
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 6.1e-43 179.1 220 44.5
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 5.1e-42 176.0 299 34.8
Hma1.2p1_0271F.1_g108750 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.8e-39 167.5 158 51.3
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 7.4e-33 145.6 169 47.9
MD11G1100600 Malus domestica HOM05D007297 ORTHO05D009352 3.1e-31 140.2 106 65.1
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 2.7e-27 127.1 101 60.4
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 8.8e-26 122.1 126 52.4
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 7.7e-22 109.0 247 30.4
MCO13G078 Micromonas commoda HOM05D007297 ORTHO05D009352 9.8e-17 92.0 329 28.6
Hma1.2p1_0367F.1_g137160 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 6.3e-16 89.4 70 60.0
Hma1.2p1_0422F.1_g150110 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.3e-13 80.9 119 42.0
Eucgr.L00579 Eucalyptus grandis HOM05D007297 ORTHO05D009352 3.7e-08 63.5 110 38.2


User provided reference genes

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