Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 7.5e-214 746.9 369 100.0
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 4.8e-205 717.6 369 94.6
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 8.3e-205 716.8 369 95.4
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 9.1e-204 713.4 369 95.4
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 5.9e-203 710.7 369 93.5
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 2.3e-202 708.8 384 91.7
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 1.7e-194 682.6 364 91.5
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 4.3e-193 677.9 364 91.2
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 1.6e-192 676.0 364 90.4
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 2.8e-192 675.2 359 91.6
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 2.3e-191 672.2 360 89.7
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 2.9e-181 638.6 371 83.3
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 7.1e-172 607.4 362 80.7
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 9.2e-172 607.1 365 80.5
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 1.7e-170 602.8 363 78.8
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 1.7e-170 602.8 370 78.6
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 1.7e-170 602.8 362 80.4
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 2.3e-170 602.4 371 78.7
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 3.0e-170 602.1 370 78.4
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 5.1e-170 601.3 362 79.6
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 5.1e-170 601.3 362 79.8
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 3.3e-169 598.6 362 78.2
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 5.6e-169 597.8 362 79.3
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 7.3e-169 597.4 362 78.5
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 1.2e-168 596.7 360 78.3
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 2.1e-168 595.9 369 78.0
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 2.8e-168 595.5 361 80.1
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 3.6e-168 595.1 362 78.5
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 3.6e-168 595.1 360 78.3
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 3.6e-168 595.1 362 77.6
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 4.7e-168 594.7 368 76.4
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 6.2e-168 594.3 369 77.0
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 8.1e-168 594.0 368 78.5
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 3.1e-167 592.0 360 78.3
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 4.0e-167 591.7 365 77.0
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 5.2e-167 591.3 360 78.6
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 8.9e-167 590.5 360 78.6
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 2.0e-166 589.3 368 75.8
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 2.6e-166 589.0 370 76.5
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 3.4e-166 588.6 365 77.0
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 7.6e-166 587.4 360 77.5
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 7.6e-166 587.4 360 75.8
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 9.9e-166 587.0 365 75.9
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 1.7e-165 586.3 360 77.8
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 6.4e-165 584.3 360 76.9
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 8.4e-165 583.9 359 77.2
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 1.1e-164 583.6 362 76.8
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 1.4e-164 583.2 361 77.3
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 2.4e-164 582.4 362 76.5
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 2.4e-164 582.4 360 78.1
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 4.2e-164 581.6 360 76.9
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 4.2e-164 581.6 360 76.4
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 4.2e-164 581.6 364 76.4
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 5.4e-164 581.3 360 77.8
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 7.1e-164 580.9 364 76.6
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 9.2e-164 580.5 360 77.5
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 1.6e-163 579.7 360 77.5
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 2.1e-163 579.3 360 76.4
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 3.5e-163 578.6 360 75.6
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 7.8e-163 577.4 360 75.8
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 7.8e-163 577.4 360 75.6
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 7.8e-163 577.4 362 75.1
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 2.3e-162 575.9 365 74.8
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 3.0e-162 575.5 366 74.6
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 3.0e-162 575.5 360 75.8
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 1.5e-161 573.2 360 76.4
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 1.5e-161 573.2 360 76.4
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 1.1e-159 567.0 393 72.0
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 1.8e-159 566.2 365 74.0
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 5.3e-159 564.7 369 74.0
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 1.2e-158 563.5 362 75.4
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 1.2e-158 563.5 360 75.0
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 2.6e-158 562.4 361 76.2
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 2.9e-157 558.9 371 73.0
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 7.1e-156 554.3 352 75.3
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 7.8e-155 550.8 377 72.4
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 2.3e-154 549.3 377 72.1
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 1.9e-153 546.2 363 73.6
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 2.5e-153 545.8 360 74.4
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 1.1e-151 540.4 372 70.4
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 1.8e-151 539.7 364 71.4
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 5.3e-143 511.5 350 71.1
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 9.9e-142 507.3 360 68.3
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 2.9e-141 505.8 370 66.8
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 1.4e-135 486.9 303 77.9
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 2.6e-134 482.6 363 65.6
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 1.0e-133 480.7 299 78.3
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 9.3e-132 474.2 266 83.1
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 1.2e-131 473.8 362 63.8
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 1.6e-131 473.4 283 81.6
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 1.3e-130 470.3 361 64.3
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 2.5e-129 466.1 283 80.2
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 1.2e-126 457.2 367 63.2
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 1.2e-126 457.2 270 78.5
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 1.0e-117 427.6 306 69.3
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 8.0e-107 391.3 407 51.8
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 2.0e-105 386.7 240 77.9
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 5.7e-105 385.2 223 78.9
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 7.4e-105 384.8 226 78.3
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 7.7e-102 374.8 227 81.1
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 4.2e-84 315.8 212 76.9
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 3.3e-76 289.7 182 72.5
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 3.5e-46 189.9 119 73.9
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 5.1e-45 186.0 116 72.4
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 5.1e-45 186.0 132 65.9
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 3.3e-44 183.3 124 69.4
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 7.3e-44 182.2 125 68.8
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 7.3e-44 182.2 125 68.8
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 6.2e-43 179.1 121 69.4
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.2e-41 174.9 124 67.7
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 1.1e-39 168.3 95 84.2
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 1.4e-26 124.8 94 67.0
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 7.6e-17 92.4 57 70.2
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 5.1e-13 79.7 43 83.7
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 7.4e-12 75.9 298 25.2
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 2.2e-11 74.3 54 64.8
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 2.2e-11 74.3 54 64.8
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 4.8e-11 73.2 54 64.8
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 1.2e-09 68.6 54 61.1
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 6.1e-06 56.2 63 49.2


User provided reference genes

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