Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10024083m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 1.7e-47 192.2 87 100.0
AT3G23320 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 1.9e-19 99.0 95 47.4
Thhalv10015769m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 2.5e-19 98.6 95 46.3
AT5G52115 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 9.5e-19 96.7 95 44.2
AT5G65005 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 9.5e-19 96.7 95 44.2
AL3G31830 Arabidopsis lyrata HOM05D004976 ORTHO05D004851 6.2e-18 94.0 92 48.9
Sp6g05670 Schrenkiella parvula HOM05D004976 ORTHO05D004851 4.9e-15 84.3 99 39.4
BolC1t01989H Brassica oleracea HOM05D004976 ORTHO05D004851 8.4e-15 83.6 99 39.4
AT1G52990 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 1.6e-13 79.3 92 43.5
C09p45640 Brassica napus HOM05D004976 ORTHO05D004851 7.8e-13 77.0 88 39.8
BolC9t56103H Brassica oleracea HOM05D004976 ORTHO05D004851 1.3e-12 76.3 99 37.4
BcaC01g03112 Brassica carinata HOM05D000003 ORTHO05D004851 1.6e-10 69.3 95 37.9
BcaNung01203 Brassica carinata HOM05D000003 ORTHO05D000004 2.1e-10 68.9 92 37.0
BcaB02g10660 Brassica carinata HOM05D000003 ORTHO05D000004 1.1e-09 66.6 89 42.7
C03p88940 Brassica napus HOM05D004976 ORTHO05D004851 1.1e-09 66.6 95 34.7
C09p00160 Brassica napus HOM05D004976 ORTHO05D004851 9.0e-09 63.5 95 32.6
BcaB01g00937 Brassica carinata HOM05D000003 ORTHO05D000004 1.2e-08 63.2 88 39.8
AL1G41300 Arabidopsis lyrata HOM05D004976 ORTHO05D004851 3.4e-08 61.6 65 47.7
A09p37980 Brassica napus HOM05D004976 ORTHO05D004851 9.9e-08 60.1 95 30.5
A10p08070 Brassica napus HOM05D004976 ORTHO05D004851 2.9e-07 58.5 95 29.5
BraA01t03834Z Brassica rapa HOM05D004976 ORTHO05D004851 2.9e-07 58.5 95 29.5
A03p28430 Brassica napus HOM05D004976 ORTHO05D004851 6.4e-07 57.4 89 32.6
BraA03t12048Z Brassica rapa HOM05D004976 ORTHO05D004851 6.4e-07 57.4 89 32.6
Thhalv10003059m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 6.4e-07 57.4 61 41.0
C02p57240 Brassica napus HOM05D000003 ORTHO05D004851 8.4e-07 57.0 75 37.3
CARHR123710 Cardamine hirsuta HOM05D004976 ORTHO05D004851 8.4e-07 57.0 95 32.6
C09p05940 Brassica napus HOM05D004976 ORTHO05D004851 1.1e-06 56.6 97 30.9
BolC9t53519H Brassica oleracea HOM05D004976 ORTHO05D004851 1.1e-06 56.6 97 30.9
Thhalv10005379m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 2.4e-06 55.5 41 56.1
AT1G04625 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 4.2e-06 54.7 85 31.8
Thhalv10019506m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 4.2e-06 54.7 95 30.5
BraA06t23723Z Brassica rapa HOM05D004976 ORTHO05D004851 5.4e-06 54.3 84 32.1


User provided reference genes

Program Settings