Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10023883m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 1.1e-55 219.5 98 100.0
Sp2g03540 Schrenkiella parvula HOM05D009053 ORTHO05D010698 1.0e-40 169.9 98 81.6
Thhalv10023986m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 5.7e-36 154.1 98 71.4
CARHR052060 Cardamine hirsuta HOM05D009053 ORTHO05D010698 3.7e-35 151.4 96 77.1
Carub.0002s0423 Capsella rubella HOM05D009053 ORTHO05D010698 6.9e-34 147.1 96 72.9
AT1G60989 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 4.5e-33 144.4 96 74.0
Carub.0002s0426 Capsella rubella HOM05D009053 ORTHO05D010698 1.7e-32 142.5 98 70.4
AL2G15500 Arabidopsis lyrata HOM05D009053 ORTHO05D010698 2.9e-32 141.7 99 69.7
AT1G60986 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 2.9e-32 141.7 99 68.7
Aa31LG2G9610 Aethionema arabicum HOM05D009053 ORTHO05D010698 2.5e-31 138.7 96 68.8
A01p30500 Brassica napus HOM05D009053 ORTHO05D010698 3.2e-31 138.3 96 67.7
BraA01t03182Z Brassica rapa HOM05D009053 ORTHO05D010698 3.2e-31 138.3 96 67.7
BcaC09g49348 Brassica carinata HOM05D009053 ORTHO05D010698 4.2e-31 137.9 96 67.7
C01p37590 Brassica napus HOM05D009053 ORTHO05D010698 4.2e-31 137.9 96 67.7
BolC1t03725H Brassica oleracea HOM05D009053 ORTHO05D010698 4.2e-31 137.9 96 67.7
Thhalv10024049m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 7.2e-31 137.1 132 53.8
A01p29760 Brassica napus HOM05D009053 ORTHO05D010698 1.2e-30 136.3 96 66.7
BraA01t03103Z Brassica rapa HOM05D009053 ORTHO05D010698 1.2e-30 136.3 96 66.7
BcaB04g20305 Brassica carinata HOM05D009053 ORTHO05D010698 2.7e-30 135.2 96 66.7
BcaB04g20300 Brassica carinata HOM05D009053 ORTHO05D010698 1.1e-28 129.8 96 63.5
AT1G60985 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 9.4e-23 110.2 98 56.1
AL2G15490 Arabidopsis lyrata HOM05D009053 ORTHO05D010698 2.7e-22 108.6 99 53.5
AT1G60987 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 6.1e-22 107.5 99 52.5
AL2G15510 Arabidopsis lyrata HOM05D009053 ORTHO05D014846 2.4e-18 95.5 97 47.4
AL2G15522 Arabidopsis lyrata HOM05D009053 ORTHO05D014846 2.4e-18 95.5 97 47.4
AT1G60983 Arabidopsis thaliana HOM05D009053 ORTHO05D014846 7.0e-18 94.0 97 47.4
Carub.0002s0427 Capsella rubella HOM05D009053 ORTHO05D014846 1.7e-16 89.4 97 44.3
CARHR052040 Cardamine hirsuta HOM05D009053 ORTHO05D014846 1.5e-15 86.3 97 43.3
Thhalv10023863m.g Eutrema salsugineum HOM05D009053 ORTHO05D014846 1.2e-14 83.2 97 45.4
BcaC02g10447 Brassica carinata HOM05D009053 ORTHO05D014846 1.4e-13 79.7 97 45.4
C04p28810 Brassica napus HOM05D009053 ORTHO05D014846 1.4e-13 79.7 97 45.4
BolC4t24415H Brassica oleracea HOM05D009053 ORTHO05D014846 1.4e-13 79.7 97 45.4
A03p68010 Brassica napus HOM05D009053 ORTHO05D014846 8.8e-13 77.0 93 45.2
BraA01t02672Z Brassica rapa HOM05D009053 ORTHO05D014846 8.8e-13 77.0 93 45.2
THA.LOC104820250 Tarenaya hassleriana HOM05D010807 ORTHO05D010698 5.7e-12 74.3 98 46.9
AL7G39650 Arabidopsis lyrata HOM05D010807 ORTHO05D010698 1.7e-11 72.8 103 41.7
Sp2g03580 Schrenkiella parvula HOM05D009053 ORTHO05D014846 2.2e-11 72.4 100 42.0
AT4G15735 Arabidopsis thaliana HOM05D010807 ORTHO05D010698 2.8e-11 72.0 103 41.7
Aa31LG10G6400 Aethionema arabicum HOM05D010807 ORTHO05D010698 4.8e-11 71.2 99 43.4
Thhalv10024151m.g Eutrema salsugineum HOM05D009053 ORTHO05D014846 2.4e-10 68.9 100 40.0
Carub.0007s2597 Capsella rubella HOM05D010807 ORTHO05D010698 1.2e-09 66.6 97 41.2
CARHR260120 Cardamine hirsuta HOM05D010807 ORTHO05D010698 1.7e-08 62.8 95 45.3
Thhalv10026979m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 5.0e-08 61.2 90 46.7
CARHR056520 Cardamine hirsuta HOM05D010807 ORTHO05D010698 1.9e-07 59.3 106 37.7


User provided reference genes

Program Settings