Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10023805m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 2.5e-62 241.9 117 100.0
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.9e-30 136.0 133 53.4
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.2e-28 127.9 135 51.1
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.1e-25 120.2 134 50.0
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 9.2e-25 117.1 131 46.6
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 8.6e-23 110.5 133 46.6
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 6.2e-21 104.4 135 42.2
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.8e-20 100.9 131 45.8
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 1.2e-19 100.1 132 42.4
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 2.0e-19 99.4 135 40.7
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 1.7e-18 96.3 128 38.3
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 3.7e-18 95.1 133 41.4
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 8.3e-18 94.0 136 41.2
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.9e-17 92.8 130 37.7
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.4e-17 92.4 112 45.5
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 7.0e-17 90.9 112 44.6
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 2.1e-16 89.4 112 48.2
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 2.1e-16 89.4 112 48.2
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 3.5e-16 88.6 134 35.8
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 6.0e-16 87.8 84 57.1
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 3.9e-15 85.1 117 45.3
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 6.6e-15 84.3 132 40.2
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 1.5e-14 83.2 137 36.5
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 2.5e-14 82.4 132 36.4
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.6e-14 81.3 111 37.8
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 7.3e-14 80.9 119 40.3
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 9.5e-14 80.5 134 35.1
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 9.5e-14 80.5 114 40.4
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 3.6e-13 78.6 83 49.4
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 4.7e-13 78.2 134 32.8
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 4.7e-13 78.2 134 32.8
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-12 77.0 121 40.5
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.4e-12 76.6 105 41.9
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.4e-12 76.6 110 40.9
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 1.4e-12 76.6 134 33.6
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 2.3e-12 75.9 134 32.1
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.1e-12 75.5 96 42.7
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 4.0e-12 75.1 107 40.2
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 6.8e-12 74.3 123 38.2
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 8.9e-12 73.9 101 41.6
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 1.2e-11 73.6 134 33.6
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 1.5e-11 73.2 115 38.3
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 2.0e-11 72.8 115 38.3
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 7.5e-11 70.9 127 35.4
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 7.5e-11 70.9 108 36.1
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 7.5e-11 70.9 108 36.1
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 9.9e-11 70.5 108 36.1
C04p12630 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-10 70.1 97 41.2
BolC4t22912H Brassica oleracea HOM05D007210 ORTHO05D006152 1.3e-10 70.1 97 41.2
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 1.3e-10 70.1 112 39.3
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 1.7e-10 69.7 138 31.9
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 1.7e-10 69.7 107 36.4
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 2.2e-10 69.3 111 36.9
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 2.2e-10 69.3 107 36.4
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 2.2e-10 69.3 107 36.4
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 2.2e-10 69.3 107 36.4
BolC3t13972H Brassica oleracea HOM05D007210 ORTHO05D006152 2.2e-10 69.3 103 39.8
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 3.7e-10 68.6 100 38.0
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 8.3e-10 67.4 96 39.6
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 8.3e-10 67.4 96 39.6
Carub.0002s0164 Capsella rubella HOM05D007210 ORTHO05D006152 8.3e-10 67.4 86 39.5
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-09 67.0 96 38.5
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 1.4e-09 66.6 100 36.0
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 1.4e-09 66.6 100 36.0
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 2.4e-09 65.9 95 38.9
BolC8t51626H Brassica oleracea HOM05D007210 ORTHO05D006152 3.2e-09 65.5 118 35.6
CARHR048270 Cardamine hirsuta HOM05D007210 ORTHO05D006152 4.1e-09 65.1 132 31.1
BcaC02g11660 Brassica carinata HOM05D007210 ORTHO05D006152 1.2e-08 63.5 100 40.0
BcaNung06875 Brassica carinata HOM05D007210 ORTHO05D006152 1.2e-08 63.5 88 39.8
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 1.6e-08 63.2 90 40.0
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 1.6e-08 63.2 100 35.0
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 2.1e-08 62.8 97 37.1
BolC9t57696H Brassica oleracea HOM05D007210 ORTHO05D006152 2.1e-08 62.8 97 37.1
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 2.7e-08 62.4 114 36.0
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 2.7e-08 62.4 96 36.5
BcaC04g22476 Brassica carinata HOM05D007210 ORTHO05D006152 1.3e-07 60.1 114 34.2
BolC9t54788H Brassica oleracea HOM05D007210 ORTHO05D006152 1.3e-07 60.1 114 34.2
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 2.3e-07 59.3 96 34.4
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.0e-07 58.9 107 33.6
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 3.9e-07 58.5 165 25.5
A09p15620 Brassica napus HOM05D007210 ORTHO05D006152 3.9e-07 58.5 109 34.9
BraA09t37202Z Brassica rapa HOM05D007210 ORTHO05D006152 3.9e-07 58.5 109 34.9
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 5.1e-07 58.2 96 34.4
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 8.6e-07 57.4 64 48.4
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 1.5e-06 56.6 137 31.4
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 3.3e-06 55.5 101 32.7
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 3.3e-06 55.5 101 32.7


User provided reference genes

Program Settings