Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10023770m.g Eutrema salsugineum HOM05D004289 ORTHO05D005141 5.1e-51 204.1 104 100.0
Sp2g05730 Schrenkiella parvula HOM05D004289 ORTHO05D005141 1.5e-39 166.0 106 84.0
AT1G57765 Arabidopsis thaliana HOM05D004289 ORTHO05D005141 3.8e-38 161.4 102 84.3
CARHR054450 Cardamine hirsuta HOM05D004289 ORTHO05D005141 4.9e-38 161.0 106 81.1
AL1G67510 Arabidopsis lyrata HOM05D004289 ORTHO05D005141 1.2e-36 156.4 102 81.4
Sp1g08260 Schrenkiella parvula HOM05D004289 ORTHO05D005141 2.7e-36 155.2 106 77.4
Aa31LG1G5340 Aethionema arabicum HOM05D004289 ORTHO05D005141 7.4e-34 147.1 106 72.6
CARHR009620 Cardamine hirsuta HOM05D004289 ORTHO05D005141 8.1e-33 143.7 106 74.5
Thhalv10009166m.g Eutrema salsugineum HOM05D004289 ORTHO05D005141 8.1e-33 143.7 106 74.5
BcaB03g13311 Brassica carinata HOM05D004289 ORTHO05D005141 1.1e-32 143.3 106 71.7
BcaC07g41867 Brassica carinata HOM05D004289 ORTHO05D005141 2.4e-32 142.1 106 73.6
C08p49340 Brassica napus HOM05D004289 ORTHO05D005141 2.4e-32 142.1 106 73.6
THA.LOC104823700 Tarenaya hassleriana HOM05D004289 ORTHO05D005141 2.4e-32 142.1 106 72.6
AL1G20190 Arabidopsis lyrata HOM05D004289 ORTHO05D005141 5.3e-32 141.0 106 73.6
THA.LOC104816824 Tarenaya hassleriana HOM05D004289 ORTHO05D005141 4.5e-31 137.9 106 73.6
AT1G09645 Arabidopsis thaliana HOM05D004289 ORTHO05D005141 1.0e-30 136.7 105 70.5
Carub.0002s0680 Capsella rubella HOM05D004289 ORTHO05D005141 2.2e-30 135.6 103 77.7
BolC8t52471H Brassica oleracea HOM05D004289 ORTHO05D005141 4.2e-29 131.3 116 66.4
C08p13100 Brassica napus HOM05D004289 ORTHO05D005141 9.3e-29 130.2 93 76.3
Carub.0001s0900 Capsella rubella HOM05D004289 ORTHO05D005141 4.6e-28 127.9 106 68.9
Aa31LG2G11220 Aethionema arabicum HOM05D004289 ORTHO05D005141 1.0e-27 126.7 106 67.0
C05p07700 Brassica napus HOM05D004289 ORTHO05D005141 6.7e-27 124.0 97 72.2
BraA06t23844Z Brassica rapa HOM05D004289 ORTHO05D005141 1.1e-24 116.7 104 67.3
BolC8t48938H Brassica oleracea HOM05D002143 ORTHO05D002260 1.4e-24 116.3 80 81.2
THA.LOC104820335 Tarenaya hassleriana HOM05D004289 ORTHO05D005141 3.1e-24 115.2 104 63.5
MD08G1244000 Malus domestica HOM05D004289 ORTHO05D005141 4.1e-24 114.8 93 67.7
BraA08t35355Z Brassica rapa HOM05D002143 ORTHO05D002260 5.3e-24 114.4 80 77.5
Duzib052G0484 Durio zibethinus HOM05D004289 ORTHO05D005141 2.6e-23 112.1 92 66.3
Gohir.A03G215700 Gossypium hirsutum HOM05D004289 ORTHO05D005141 3.4e-23 111.7 92 65.2
Thecc.02G016600 Theobroma cacao HOM05D004289 ORTHO05D005141 3.4e-23 111.7 92 67.4
BolC5t29521H Brassica oleracea HOM05D004289 ORTHO05D005141 1.7e-22 109.4 123 56.9
Lsat_1_v5_gn_5_104580 Lactuca sativa HOM05D004289 ORTHO05D005141 2.9e-22 108.6 94 61.7
A06p06330 Brassica napus HOM05D004289 ORTHO05D005141 3.8e-22 108.2 80 76.2
MD15G1438300 Malus domestica HOM05D004289 ORTHO05D005141 3.8e-22 108.2 92 65.2
Gohir.D02G237200 Gossypium hirsutum HOM05D004289 ORTHO05D005141 5.0e-22 107.8 92 63.0
Gorai.005G265800 Gossypium raimondii HOM05D004289 ORTHO05D005141 5.0e-22 107.8 92 63.0
Prupe.1G581300 Prunus persica HOM05D004289 ORTHO05D005141 5.5e-21 104.4 92 63.0
CSS0038337 Camellia sinensis var. sinensis HOM05D004289 ORTHO05D005141 7.2e-21 104.0 94 59.6
CSS0038950 Camellia sinensis var. sinensis HOM05D004289 ORTHO05D005141 9.3e-21 103.6 92 58.7
Manes.10G116200 Manihot esculenta HOM05D004289 ORTHO05D005141 4.6e-20 101.3 95 60.0
COL.COLO4_17708 Corchorus olitorius HOM05D004289 ORTHO05D005141 6.1e-20 100.9 92 58.7
Potri.004G226100 Populus trichocarpa HOM05D004289 ORTHO05D005141 7.9e-20 100.5 94 56.4
Sabra01G0171700 Salix brachista HOM05D004289 ORTHO05D005141 1.0e-19 100.1 94 56.4
ECA236G0617 Erigeron canadensis HOM05D004289 ORTHO05D005141 1.8e-19 99.4 91 59.3
TAR381G0514 Trochodendron aralioides HOM05D004289 ORTHO05D005141 1.8e-19 99.4 94 56.4
GSVIVG01023230001 Vitis vinifera HOM05D004289 ORTHO05D005141 1.8e-19 99.4 94 61.7
Migut.B00750 Erythranthe guttata HOM05D004289 ORTHO05D005141 8.7e-19 97.1 87 59.8
PSO170G0294 Papaver somniferum HOM05D004289 ORTHO05D005141 8.7e-19 97.1 106 53.8
Actinidia38989 Actinidia chinensis HOM05D004289 ORTHO05D005141 3.3e-18 95.1 94 55.3
AUR62028456 Chenopodium quinoa HOM05D004289 ORTHO05D005141 3.3e-18 95.1 94 57.4
Lsat_1_v5_gn_9_119620 Lactuca sativa HOM05D004289 ORTHO05D005141 3.3e-18 95.1 94 56.4
Duzib248G0764 Durio zibethinus HOM05D004289 ORTHO05D005141 4.3e-18 94.7 92 60.9
VMungo0540G0867 Vigna mungo HOM05D004289 ORTHO05D005141 7.4e-18 94.0 91 57.1
RcHm_v2.0_Chr7g0220501 Rosa chinensis HOM05D004289 ORTHO05D005141 9.7e-18 93.6 91 57.1
SGA_v2.0_scaffold131G34372 Striga asiatica HOM05D004289 ORTHO05D005141 9.7e-18 93.6 99 53.5
Nitab4.5_0005169g0070 Nicotiana tabacum HOM05D004289 ORTHO05D005141 1.3e-17 93.2 81 58.0
Potri.003G005400 Populus trichocarpa HOM05D004289 ORTHO05D005141 1.3e-17 93.2 95 54.7
TAR628G0462 Trochodendron aralioides HOM05D004289 ORTHO05D005141 1.3e-17 93.2 105 49.5
CiPaw.03G018600 Carya illinoinensis HOM05D004289 ORTHO05D005141 1.6e-17 92.8 108 49.1
AUR62042238 Chenopodium quinoa HOM05D004289 ORTHO05D005141 2.2e-17 92.4 94 55.3
Eucgr.I02780 Eucalyptus grandis HOM05D004289 ORTHO05D005141 2.2e-17 92.4 94 57.4
PSO017G2658 Papaver somniferum HOM05D004289 ORTHO05D005141 2.2e-17 92.4 100 53.0
GSVIVG01025943001 Vitis vinifera HOM05D004289 ORTHO05D005141 2.2e-17 92.4 111 47.7
HanXRQChr06g0182751 Helianthus annuus HOM05D004289 ORTHO05D005141 2.8e-17 92.0 92 56.5
MELO3C016488.2 Cucumis melo HOM05D004289 ORTHO05D005141 4.8e-17 91.3 89 59.6
CiPaw.04G012500 Carya illinoinensis HOM05D004289 ORTHO05D005141 6.3e-17 90.9 93 54.8
MD08G1216400 Malus domestica HOM05D004289 ORTHO05D005141 6.3e-17 90.9 91 52.7
Oeu058640.2 Olea europaea HOM05D004289 ORTHO05D005141 6.3e-17 90.9 108 56.5
Nn5g27488 Nelumbo nucifera HOM05D004289 ORTHO05D005141 8.2e-17 90.5 94 50.0
Ciclev10003782m.g Citrus clementina HOM05D004289 ORTHO05D005141 1.8e-16 89.4 80 63.8
Prupe.1G549500 Prunus persica HOM05D004289 ORTHO05D005141 1.8e-16 89.4 106 47.2
Ah.02g128340 Amaranthus hybridus HOM05D004289 ORTHO05D005141 2.4e-16 89.0 101 50.5
Phvul.006G220000 Phaseolus vulgaris HOM05D004289 ORTHO05D005141 4.1e-16 88.2 84 56.0
QL09p003196 Quercus lobata HOM05D004289 ORTHO05D005141 5.3e-16 87.8 93 48.4
QL09p004791 Quercus lobata HOM05D004289 ORTHO05D005141 5.3e-16 87.8 93 48.4
TWI23G1156 Tripterygium wilfordii HOM05D004289 ORTHO05D005141 5.3e-16 87.8 93 50.5
Aqoxy5G00854 Aquilegia oxysepala HOM05D004289 ORTHO05D005141 6.9e-16 87.4 103 48.5
MSTRG.20324 Avicennia marina HOM05D004289 ORTHO05D005141 6.9e-16 87.4 96 52.1
MBI06_g06694_MAGBIO Magnolia biondii HOM05D004289 ORTHO05D005141 6.9e-16 87.4 96 49.0
MD05G1210300 Malus domestica HOM05D004289 ORTHO05D005141 9.0e-16 87.0 91 50.5
Nitab4.5_0029023g0010 Nicotiana tabacum HOM05D004289 ORTHO05D005141 9.0e-16 87.0 88 54.5
Sopen11g012540 Solanum pennellii HOM05D004289 ORTHO05D005141 9.0e-16 87.0 106 50.0
TWI14G0848 Tripterygium wilfordii HOM05D004289 ORTHO05D005141 9.0e-16 87.0 94 51.1
unitig_748.g7732 Utricularia gibba HOM05D004289 ORTHO05D005141 9.0e-16 87.0 86 53.5
vmacro19856 Vaccinium macrocarpon HOM05D004289 ORTHO05D005141 1.2e-15 86.7 83 60.2
TPR.G34161 Trifolium pratense HOM05D004289 ORTHO05D005141 1.5e-15 86.3 95 54.7
Zm00001eb288300 Zea mays HOM05D004289 ORTHO05D005141 1.5e-15 86.3 105 47.6
Peaxi162Scf00688g00334 Petunia axillaris HOM05D004289 ORTHO05D005141 2.0e-15 85.9 92 52.2
Migut.C01335 Erythranthe guttata HOM05D004289 ORTHO05D005141 2.6e-15 85.5 92 51.1
Manes.07G025900 Manihot esculenta HOM05D004289 ORTHO05D005141 2.6e-15 85.5 92 54.3
Sc16g0004250 Simmondsia chinensis HOM05D004289 ORTHO05D005141 2.6e-15 85.5 94 55.3
Cc10_g09380 Coffea canephora HOM05D004289 ORTHO05D005141 4.5e-15 84.7 101 50.5
Os05g0419600 Oryza sativa ssp. japonica HOM05D004289 ORTHO05D005141 4.5e-15 84.7 91 50.5
EL10Ac6g14140 Beta vulgaris HOM05D004289 ORTHO05D005141 5.9e-15 84.3 74 60.8
PGSC0003DMG400025523 Solanum tuberosum HOM05D004289 ORTHO05D005141 5.9e-15 84.3 91 53.8
QL02p100957 Quercus lobata HOM05D004289 ORTHO05D005141 7.7e-15 84.0 106 48.1
Sabra19G0088300 Salix brachista HOM05D004289 ORTHO05D005141 7.7e-15 84.0 94 45.7
Atru.chr6.550 Acer truncatum HOM05D004289 ORTHO05D005141 1.3e-14 83.2 53 77.4
Medtr4g032200 Medicago truncatula HOM05D004289 ORTHO05D005141 1.3e-14 83.2 95 50.5
FAN10G0807 Fragaria x ananassa HOM05D004289 ORTHO05D005141 1.7e-14 82.8 91 53.8
Lj3g0023226 Lotus japonicus HOM05D004289 ORTHO05D005141 1.7e-14 82.8 94 48.9
RcHm_v2.0_Chr7g0229261 Rosa chinensis HOM05D004289 ORTHO05D005141 2.9e-14 82.0 103 46.6
SalBow7G0958 Salvia bowleyana HOM05D004289 ORTHO05D005141 2.9e-14 82.0 81 55.6
Potri.019G077100 Populus trichocarpa HOM05D004289 ORTHO05D005141 3.8e-14 81.6 92 47.8
ATR1136G135 Amborella trichopoda HOM05D004289 ORTHO05D005141 5.0e-14 81.3 86 54.7
MBI17_g24966_MAGBIO Magnolia biondii HOM05D004289 ORTHO05D005141 5.0e-14 81.3 83 54.2
FAN13G3078 Fragaria x ananassa HOM05D004289 ORTHO05D005141 6.5e-14 80.9 90 48.9
FvH4_5g32580 Fragaria vesca HOM05D004289 ORTHO05D005141 8.5e-14 80.5 90 47.8
Nitab4.5_0000016g0420 Nicotiana tabacum HOM05D004289 ORTHO05D005141 8.5e-14 80.5 85 51.8
unitig_32.g11200 Utricularia gibba HOM05D004289 ORTHO05D005141 1.1e-13 80.1 90 48.9
HPP92_002618 Vanilla planifolia HOM05D004289 ORTHO05D005141 1.4e-13 79.7 100 45.0
MD15G1403500 Malus domestica HOM05D004289 ORTHO05D005141 1.9e-13 79.3 90 43.3
MELO3C022208.2 Cucumis melo HOM05D004289 ORTHO05D005141 2.5e-13 79.0 108 41.7
FAN18G0926 Fragaria x ananassa HOM05D004289 ORTHO05D005141 2.5e-13 79.0 89 51.7
Glyma.08G237900 Glycine max HOM05D004289 ORTHO05D005141 2.5e-13 79.0 94 48.9
HPP92_002677 Vanilla planifolia HOM05D004289 ORTHO05D005141 2.5e-13 79.0 100 44.0
Haze_10030 Corylus avellana HOM05D004289 ORTHO05D005141 3.2e-13 78.6 70 62.9
HanXRQChr03g0067991 Helianthus annuus HOM05D004289 ORTHO05D005141 3.2e-13 78.6 90 48.9
Phvul.011G000300 Phaseolus vulgaris HOM05D004289 ORTHO05D005141 5.5e-13 77.8 94 44.7
Zm00001eb349170 Zea mays HOM05D004289 ORTHO05D005141 5.5e-13 77.8 105 43.8
arahy.Tifrunner.gnm1.ann1.291MDK Arachis hypogaea HOM05D004289 ORTHO05D005141 7.2e-13 77.4 91 49.5
Gohir.D04G177000 Gossypium hirsutum HOM05D004289 ORTHO05D005141 2.1e-12 75.9 91 49.5
Gorai.012G169900 Gossypium raimondii HOM05D004289 ORTHO05D005141 2.1e-12 75.9 91 49.5
SalBow7G1625 Salvia bowleyana HOM05D004289 ORTHO05D005141 2.1e-12 75.9 76 56.6
Glyma.16G002000 Glycine max HOM05D004289 ORTHO05D005141 2.7e-12 75.5 91 49.5
MBI18_g30384_MAGBIO Magnolia biondii HOM05D004289 ORTHO05D005141 3.6e-12 75.1 82 53.7
Gohir.A04G133900 Gossypium hirsutum HOM05D004289 ORTHO05D005141 6.1e-12 74.3 90 48.9
RcHm_v2.0_Chr3g0495521 Rosa chinensis HOM05D004289 ORTHO05D005141 6.1e-12 74.3 74 50.0
VMungo0540G1552 Vigna mungo HOM05D004289 ORTHO05D005141 6.1e-12 74.3 59 64.4
ClCG08G000420 Citrullus lanatus HOM05D004289 ORTHO05D005141 7.9e-12 73.9 81 50.6
Glyma.12G165600 Glycine max HOM05D004289 ORTHO05D005141 1.0e-11 73.6 93 48.4
RcHm_v2.0_Chr5g0063911 Rosa chinensis HOM05D004289 ORTHO05D005141 1.0e-11 73.6 74 50.0
CsaV3_5G040360 Cucumis sativus L. HOM05D004289 ORTHO05D005141 1.4e-11 73.2 108 38.9
Lalb_Chr18g0061091 Lupinus albus HOM05D004289 ORTHO05D005141 1.4e-11 73.2 92 46.7
FvH4_5g28260 Fragaria vesca HOM05D004289 ORTHO05D005141 1.8e-11 72.8 67 59.7
Psat7g226600 Pisum sativum HOM05D004289 ORTHO05D005141 1.8e-11 72.8 90 45.6
Sed0006384 Sechium edule HOM05D004289 ORTHO05D005141 2.3e-11 72.4 104 43.3
Lalb_Chr15g0090801 Lupinus albus HOM05D004289 ORTHO05D005141 3.0e-11 72.0 92 45.7
Cfa008122 Carpinus fangiana HOM05D000042 ORTHO05D000028 5.1e-11 71.2 74 51.4
Sed0020386 Sechium edule HOM05D004289 ORTHO05D005141 5.1e-11 71.2 90 52.2
arahy.Tifrunner.gnm1.ann1.M3EZX1 Arachis hypogaea HOM05D004289 ORTHO05D005141 6.7e-11 70.9 86 48.8
CiPaw.05G003600 Carya illinoinensis HOM05D004289 ORTHO05D005141 1.5e-10 69.7 70 61.4
SEGI_28610 Sequoiadendron giganteum HOM05D004061 ORTHO05D004693 1.5e-10 69.7 78 44.9
TPR.G2097 Trifolium pratense HOM05D004289 ORTHO05D005141 2.0e-10 69.3 53 64.2
Oeu048223.2 Olea europaea HOM05D004289 ORTHO05D005141 2.5e-10 68.9 65 56.9
FAN04G1595 Fragaria x ananassa HOM05D004289 ORTHO05D005141 3.3e-10 68.6 83 44.6
CDE08G0453 Ceratophyllum demersum HOM05D004289 ORTHO05D005141 4.3e-10 68.2 70 48.6
FAN18G1872 Fragaria x ananassa HOM05D004289 ORTHO05D005141 7.4e-10 67.4 82 43.9
PGR042G0739 Punica granatum HOM05D004289 ORTHO05D005141 2.2e-09 65.9 90 46.7
Cc02_g23340 Coffea canephora HOM05D004289 ORTHO05D005141 3.7e-09 65.1 94 44.7
Haze_13910 Corylus avellana HOM05D002143 ORTHO05D002260 4.8e-09 64.7 69 55.1
arahy.Tifrunner.gnm1.ann1.2Z03QX Arachis hypogaea HOM05D004289 ORTHO05D005141 1.5e-07 59.7 98 38.8
PSO339G1720 Papaver somniferum HOM05D004061 ORTHO05D004693 4.5e-07 58.2 55 58.2
DCAR_001703 Daucus carota HOM05D004289 ORTHO05D005141 1.3e-06 56.6 96 41.7
Actinidia01613 Actinidia chinensis HOM05D000487 ORTHO05D000405 2.2e-06 55.8 75 44.0
Sopen01g045750 Solanum pennellii HOM05D004289 ORTHO05D005141 2.9e-06 55.5 94 40.4
SMO164G0167 Selaginella moellendorffii HOM05D004061 ORTHO05D004693 5.0e-06 54.7 73 47.9
CARHR163390 Cardamine hirsuta HOM05D004061 ORTHO05D004693 6.5e-06 54.3 87 41.4
Peaxi162Scf00011g00155 Petunia axillaris HOM05D004289 ORTHO05D005141 6.5e-06 54.3 106 39.6


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