Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 2.3e-107 392.1 185 100.0
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 5.5e-56 221.5 170 67.1
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 3.9e-54 215.3 170 64.7
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 1.5e-53 213.4 170 63.5
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 9.6e-53 210.7 175 61.7
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 9.6e-53 210.7 175 61.7
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 2.0e-50 203.0 175 60.0
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 2.6e-50 202.6 204 53.9
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 5.9e-50 201.4 176 59.7
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.5e-48 196.1 176 58.5
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 5.5e-48 194.9 172 58.1
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 5.5e-48 194.9 176 58.0
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 1.6e-47 193.4 166 59.6
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 7.9e-47 191.0 170 58.2
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 1.3e-46 190.3 176 59.1
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 2.8e-44 182.6 173 56.6
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 6.3e-44 181.4 176 55.7
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.8e-43 179.9 169 58.6
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.0e-41 174.1 160 58.1
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 9.4e-40 167.5 175 52.6
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 4.6e-39 165.2 168 51.2
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.8e-38 163.3 173 53.8
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 8.8e-38 161.0 170 51.2
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 7.4e-37 157.9 176 52.3
C04p12630 Brassica napus HOM05D007210 ORTHO05D006152 2.2e-36 156.4 163 52.1
BolC4t22912H Brassica oleracea HOM05D007210 ORTHO05D006152 2.2e-36 156.4 163 52.1
BcaC02g11660 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-35 154.1 164 52.4
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.4e-35 152.9 142 59.2
BcaNung06875 Brassica carinata HOM05D007210 ORTHO05D006152 1.2e-31 140.6 130 57.7
CARHR048270 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.3e-30 136.3 165 47.3
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.7e-30 134.8 134 53.0
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 6.7e-30 134.8 168 44.6
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.6e-29 132.9 134 52.2
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-27 127.5 180 40.6
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 2.0e-26 123.2 150 48.7
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 4.5e-26 122.1 128 52.3
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 7.7e-26 121.3 184 38.6
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 1.5e-24 117.1 138 45.7
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 8.0e-23 111.3 117 55.6
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.0e-21 106.7 120 49.2
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 2.0e-21 106.7 171 39.2
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 4.4e-21 105.5 171 38.0
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 5.7e-21 105.1 139 43.9
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 5.7e-21 105.1 139 43.9
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 7.5e-21 104.8 172 41.9
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 7.5e-21 104.8 140 42.9
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 1.3e-20 104.0 134 44.0
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 1.3e-20 104.0 134 44.0
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 2.8e-20 102.8 174 37.4
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.7e-20 102.4 133 42.1
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 4.8e-20 102.1 134 43.3
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 1.8e-19 100.1 139 42.4
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 3.1e-19 99.4 140 42.1
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 4.1e-19 99.0 139 42.4
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 4.1e-19 99.0 139 42.4
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 9.1e-19 97.8 139 41.7
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 9.1e-19 97.8 139 41.7
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 1.2e-18 97.4 133 40.6
Carub.0002s0164 Capsella rubella HOM05D007210 ORTHO05D006152 1.2e-18 97.4 88 54.5
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 1.6e-18 97.1 165 38.2
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 3.5e-18 95.9 134 40.3
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 5.9e-18 95.1 133 42.1
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 5.9e-18 95.1 171 36.3
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 1.7e-17 93.6 132 40.9
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 2.2e-17 93.2 111 45.0
BcaC04g22476 Brassica carinata HOM05D007210 ORTHO05D006152 3.8e-17 92.4 133 42.9
BolC9t54788H Brassica oleracea HOM05D007210 ORTHO05D006152 3.8e-17 92.4 133 42.9
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-16 90.9 139 39.6
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 1.1e-16 90.9 111 44.1
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 1.9e-16 90.1 132 41.7
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.9e-16 90.1 140 37.9
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.2e-16 89.0 83 51.8
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 9.4e-16 87.8 96 49.0
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 2.1e-15 86.7 114 44.7
Thhalv10023805m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 2.1e-15 86.7 132 40.2
BolC8t51626H Brassica oleracea HOM05D007210 ORTHO05D006152 2.7e-15 86.3 126 40.5
AT5G05060 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 2.3e-14 83.2 159 38.4
A09p15620 Brassica napus HOM05D007210 ORTHO05D006152 3.0e-14 82.8 172 35.5
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 4.0e-14 82.4 131 39.7
BraA09t37202Z Brassica rapa HOM05D007210 ORTHO05D006152 5.2e-14 82.0 133 39.8
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 1.2e-13 80.9 143 37.8
BcaB08g36043 Brassica carinata HOM05D007210 ORTHO05D006152 1.2e-13 80.9 120 42.5
CARHR048280 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.2e-13 80.9 70 60.0
BolC3t13972H Brassica oleracea HOM05D007210 ORTHO05D006152 2.0e-13 80.1 102 42.2
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 5.7e-13 78.6 131 37.4
AT5G05040 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 1.7e-12 77.0 159 35.8
C05p13910 Brassica napus HOM05D007210 ORTHO05D006152 1.7e-12 77.0 154 37.0
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 4.8e-12 75.5 137 36.5
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 6.3e-12 75.1 110 38.2
BolC9t57696H Brassica oleracea HOM05D007210 ORTHO05D006152 6.3e-12 75.1 110 38.2
BcaB05g21588 Brassica carinata HOM05D008885 ORTHO05D006152 8.3e-12 74.7 150 36.7
Carub.0006s0398 Capsella rubella HOM05D008885 ORTHO05D006152 1.4e-11 73.9 155 34.8
BolC5t30124H Brassica oleracea HOM05D007210 ORTHO05D006152 1.8e-11 73.6 154 36.4
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 2.4e-11 73.2 141 36.9
BraA02t04833Z Brassica rapa HOM05D008885 ORTHO05D006152 2.4e-11 73.2 150 36.0
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 2.4e-11 73.2 141 36.9
BcaC03g13144 Brassica carinata HOM05D008885 ORTHO05D006152 4.1e-11 72.4 162 35.2
C02p02160 Brassica napus HOM05D008885 ORTHO05D006152 4.1e-11 72.4 162 35.2
BcaB07g31391 Brassica carinata HOM05D007210 ORTHO05D006152 5.4e-11 72.0 105 39.0
BcaC03g13143 Brassica carinata HOM05D008885 ORTHO05D006152 5.4e-11 72.0 150 36.0
C02p02150 Brassica napus HOM05D008885 ORTHO05D006152 5.4e-11 72.0 150 36.0
BolC2t06184H Brassica oleracea HOM05D008885 ORTHO05D006152 5.4e-11 72.0 150 36.0
BraA02t04832Z Brassica rapa HOM05D008885 ORTHO05D006152 7.0e-11 71.6 150 34.7
Carub.0008s1740 Capsella rubella HOM05D007210 ORTHO05D006152 7.0e-11 71.6 147 33.3
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 9.1e-11 71.2 129 38.8
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 9.1e-11 71.2 118 42.4
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 1.2e-10 70.9 130 37.7
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 3.5e-10 69.3 133 36.1
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 4.5e-10 68.9 129 38.0
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 1.7e-09 67.0 147 34.7
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.3e-09 66.6 149 33.6
Thhalv10015607m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 2.3e-09 66.6 116 41.4
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 3.8e-09 65.9 147 34.7
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 3.8e-09 65.9 122 38.5
BcaB08g36040 Brassica carinata HOM05D007210 ORTHO05D006152 6.5e-09 65.1 115 36.5
Thhalv10024042m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 6.5e-09 65.1 85 49.4
CARHR208210 Cardamine hirsuta HOM05D008885 ORTHO05D006152 8.6e-09 64.7 138 31.9
THA.LOC104809659 Tarenaya hassleriana HOM05D007210 ORTHO05D006152 1.5e-08 63.9 128 36.7
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 1.9e-08 63.5 122 37.7
AL6G14830 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 2.5e-08 63.2 109 36.7
Thhalv10015529m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 5.5e-08 62.0 116 37.9
Sp2g01340 Schrenkiella parvula HOM05D007210 ORTHO05D006152 5.5e-08 62.0 46 65.2
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.2e-08 61.6 134 38.8
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.6e-07 59.3 137 37.2
Carub.0006s0396 Capsella rubella HOM05D008885 ORTHO05D006152 4.7e-07 58.9 117 36.8
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 4.7e-07 58.9 124 38.7
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.1e-07 58.5 137 38.0
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.1e-07 58.5 137 38.0
Cc02_g13970 Coffea canephora HOM05D039367 ORTHO05D010647 8.0e-07 58.2 122 34.4
C03p15280 Brassica napus HOM05D008242 ORTHO05D010974 1.0e-06 57.8 120 32.5
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.8e-06 57.0 121 39.7
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.8e-06 57.0 124 40.3
Carub.0007s2602 Capsella rubella HOM05D008242 ORTHO05D012602 6.8e-06 55.1 121 33.9
Carub.0007s2681 Capsella rubella HOM05D008242 ORTHO05D012602 6.8e-06 55.1 121 32.2
Rhsim04G0228600 Rhododendron simsii HOM05D009663 ORTHO05D011812 8.8e-06 54.7 80 42.5


User provided reference genes

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