Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 1.5e-150 536.2 269 100.0
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 1.9e-121 439.5 269 83.6
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 2.3e-119 432.6 269 81.8
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 2.3e-119 432.6 269 81.8
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 2.3e-119 432.6 269 81.8
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 9.5e-118 427.2 269 81.8
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 1.1e-116 423.7 269 81.0
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 5.2e-116 421.4 269 80.3
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 8.9e-116 420.6 269 81.0
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 9.2e-113 410.6 269 80.3
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 9.9e-107 390.6 262 78.2
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 2.9e-106 389.0 262 77.9
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 5.8e-99 364.8 269 72.5
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 3.0e-95 352.4 271 69.7
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 3.5e-88 328.9 271 64.9
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 2.5e-86 322.8 225 73.3
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 1.3e-85 320.5 278 63.3
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 2.1e-85 319.7 198 78.3
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 2.8e-85 319.3 198 78.8
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 4.8e-85 318.5 279 62.0
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 4.8e-85 318.5 198 79.8
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 4.8e-85 318.5 270 63.7
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 6.2e-85 318.2 280 63.6
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 8.1e-85 317.8 198 79.3
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 8.1e-85 317.8 198 79.3
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 1.4e-84 317.0 198 78.3
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 4.0e-84 315.5 193 79.8
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 6.9e-84 314.7 281 61.6
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 6.9e-84 314.7 198 76.8
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 6.9e-84 314.7 208 76.0
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 1.2e-83 313.9 282 61.7
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 1.5e-83 313.5 234 67.9
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 1.5e-83 313.5 201 76.1
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 1.5e-83 313.5 284 59.9
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 1.5e-83 313.5 221 72.4
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 2.6e-83 312.8 237 66.2
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 2.6e-83 312.8 198 76.3
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 4.5e-83 312.0 201 75.6
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 7.6e-83 311.2 193 78.8
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 1.0e-82 310.8 197 76.1
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 1.3e-82 310.5 197 76.1
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 1.7e-82 310.1 280 60.0
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 2.2e-82 309.7 240 66.7
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 2.2e-82 309.7 197 76.6
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 3.8e-82 308.9 275 59.3
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 8.4e-82 307.8 286 60.5
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 1.4e-81 307.0 205 73.7
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 1.4e-81 307.0 210 75.2
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 1.4e-81 307.0 266 62.0
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 1.9e-81 306.6 273 61.9
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 2.5e-81 306.2 225 68.4
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 3.2e-81 305.8 205 73.2
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 3.2e-81 305.8 202 77.2
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 3.2e-81 305.8 197 75.1
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 4.2e-81 305.4 238 67.6
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 5.5e-81 305.1 241 63.9
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 5.5e-81 305.1 222 68.5
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 7.1e-81 304.7 208 74.5
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 7.1e-81 304.7 208 74.5
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 9.3e-81 304.3 201 75.6
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 1.2e-80 303.9 193 76.7
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 2.1e-80 303.1 274 62.0
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 2.1e-80 303.1 192 76.6
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 2.1e-80 303.1 223 67.3
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 3.5e-80 302.4 198 76.3
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 3.5e-80 302.4 198 76.3
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 6.0e-80 301.6 208 73.6
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 6.0e-80 301.6 245 64.5
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 6.0e-80 301.6 192 76.0
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 1.0e-79 300.8 198 74.7
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 1.0e-79 300.8 232 66.8
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 2.3e-79 299.7 198 74.2
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 3.9e-79 298.9 243 63.8
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 3.9e-79 298.9 269 62.5
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 1.1e-78 297.4 243 64.2
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 1.5e-78 297.0 187 78.1
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 1.9e-78 296.6 199 74.9
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 3.3e-78 295.8 192 75.0
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 7.4e-78 294.7 235 66.0
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 2.8e-77 292.7 205 69.8
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 3.7e-77 292.4 288 57.3
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 3.7e-77 292.4 193 70.5
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 6.3e-77 291.6 192 74.5
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 8.2e-77 291.2 252 62.7
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 8.2e-77 291.2 193 72.0
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 1.4e-76 290.4 183 75.4
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.4e-76 290.4 189 77.2
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 5.3e-76 288.5 280 57.9
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 1.5e-75 287.0 195 73.3
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 4.5e-75 285.4 286 57.3
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 5.9e-75 285.0 189 73.5
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 1.0e-74 284.3 198 69.7
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 2.7e-72 276.2 265 57.4
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 7.9e-72 274.6 187 71.7
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 1.0e-71 274.2 239 59.4
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 5.1e-71 271.9 192 67.7
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 1.6e-69 266.9 244 58.2
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 7.7e-67 258.1 191 69.1
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 1.1e-60 237.7 187 63.1
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 6.9e-60 235.0 179 64.8
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 7.7e-59 231.5 185 61.1
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 4.2e-57 225.7 218 56.9
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 2.7e-48 196.4 196 53.1
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.0e-47 194.5 121 76.9
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 3.1e-44 183.0 103 81.6
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 3.0e-23 113.2 104 57.7
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 2.2e-21 107.1 81 66.7
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 2.7e-19 100.1 86 58.1
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 7.3e-17 92.0 157 38.9
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 2.1e-16 90.5 152 34.9
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.2e-14 84.7 101 44.6
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 4.6e-11 72.8 87 46.0
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 3.3e-09 66.6 35 94.3
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 9.5e-09 65.1 169 30.2


User provided reference genes

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