Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10023154m.g Eutrema salsugineum HOM05D001524 ORTHO05D001392 8.6e-34 146.4 71 100.0
Sp3g28460 Schrenkiella parvula HOM05D001524 ORTHO05D001392 4.0e-23 110.9 67 79.1
Thhalv10022957m.g Eutrema salsugineum HOM05D001524 ORTHO05D001392 5.2e-23 110.5 67 77.6
BcaB08g34583 Brassica carinata HOM05D001524 ORTHO05D001392 8.9e-23 109.8 68 80.9
Thhalv10022994m.g Eutrema salsugineum HOM05D001524 ORTHO05D001392 1.5e-22 109.0 67 77.6
Carub.0003s2906 Capsella rubella HOM05D001524 ORTHO05D001392 2.6e-22 108.2 67 77.6
BcaC01g03070 Brassica carinata HOM05D001524 ORTHO05D001392 5.8e-22 107.1 68 79.4
BolC3t17923H Brassica oleracea HOM05D001524 ORTHO05D001392 5.8e-22 107.1 68 79.4
AT2G15170 Arabidopsis thaliana HOM05D001524 ORTHO05D001392 9.8e-22 106.3 67 73.1
CARHR105560 Cardamine hirsuta HOM05D001524 ORTHO05D001392 1.7e-21 105.5 66 74.2
AL3G46920 Arabidopsis lyrata HOM05D001524 ORTHO05D001392 3.7e-21 104.4 67 73.1
A03p45390 Brassica napus HOM05D001524 ORTHO05D001392 3.7e-21 104.4 68 76.5
C03p56330 Brassica napus HOM05D001524 ORTHO05D001392 3.7e-21 104.4 68 77.9
BraA03t13671Z Brassica rapa HOM05D001524 ORTHO05D001392 3.7e-21 104.4 68 76.5
AT2G15220 Arabidopsis thaliana HOM05D001524 ORTHO05D001392 4.9e-21 104.0 67 71.6
Carub.0003s2905 Capsella rubella HOM05D001524 ORTHO05D001392 6.4e-21 103.6 66 69.7
CARHR105610 Cardamine hirsuta HOM05D001524 ORTHO05D001392 2.4e-20 101.7 67 73.1
CARHR105570 Cardamine hirsuta HOM05D001524 ORTHO05D001392 7.0e-20 100.1 66 72.7
Sp3g28450 Schrenkiella parvula HOM05D001524 ORTHO05D001392 1.6e-19 99.0 54 85.2
BcaB03g16246 Brassica carinata HOM05D001524 ORTHO05D001392 2.5e-17 91.7 54 81.5
THA.LOC104819552 Tarenaya hassleriana HOM05D001524 ORTHO05D001392 4.3e-17 90.9 64 68.8
C07p08690 Brassica napus HOM05D001524 ORTHO05D001392 2.8e-16 88.2 54 77.8
BolC7t41280H Brassica oleracea HOM05D001524 ORTHO05D001392 2.8e-16 88.2 54 77.8
BcaC06g36036 Brassica carinata HOM05D001524 ORTHO05D001392 1.4e-15 85.9 54 75.9
AL3G46910 Arabidopsis lyrata HOM05D001524 ORTHO05D001392 2.3e-15 85.1 55 70.9
Aa31LG8G13040 Aethionema arabicum HOM05D001524 ORTHO05D001392 3.4e-14 81.3 67 56.7
Thecc.02G109400 Theobroma cacao HOM05D001524 ORTHO05D001392 9.5e-09 63.2 59 50.8
Duzib248G0849 Durio zibethinus HOM05D001524 ORTHO05D001392 3.1e-07 58.2 59 47.5
Thecc.02G109700 Theobroma cacao HOM05D001524 ORTHO05D001392 4.0e-07 57.8 68 45.6
Gohir.A13G044000 Gossypium hirsutum HOM05D001524 ORTHO05D001392 1.2e-06 56.2 59 45.8
QL11p033258 Quercus lobata HOM05D001524 ORTHO05D001392 1.5e-06 55.8 66 40.9
Atru.chr5.2479 Acer truncatum HOM05D001524 ORTHO05D001392 2.0e-06 55.5 60 43.3
Atru.chr5.2485 Acer truncatum HOM05D001524 ORTHO05D001392 2.0e-06 55.5 60 43.3
Ciclev10030275m.g Citrus clementina HOM05D001524 ORTHO05D001392 2.6e-06 55.1 68 42.6
COL.COLO4_32581 Corchorus olitorius HOM05D001524 ORTHO05D001392 2.6e-06 55.1 45 51.1
AUR62010321 Chenopodium quinoa HOM05D001524 ORTHO05D001392 7.6e-06 53.5 61 44.3
Lj5g0026713 Lotus japonicus HOM05D001524 ORTHO05D001392 7.6e-06 53.5 66 42.4
Sabra16G0188000 Salix brachista HOM05D001524 ORTHO05D001392 7.6e-06 53.5 64 39.1
AUR62010320 Chenopodium quinoa HOM05D001524 ORTHO05D001392 9.9e-06 53.1 60 45.0
Medtr1g107215 Medicago truncatula HOM05D001524 ORTHO05D001392 9.9e-06 53.1 63 38.1
QL11p033337 Quercus lobata HOM05D001524 ORTHO05D001392 9.9e-06 53.1 59 40.7


User provided reference genes

Program Settings