Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10022824m.g Eutrema salsugineum HOM05D005496 ORTHO05D006677 1.2e-141 506.5 253 100.0
Sp3g28490 Schrenkiella parvula HOM05D005496 ORTHO05D006677 1.6e-138 496.1 253 97.6
BcaB07g31795 Brassica carinata HOM05D005496 ORTHO05D006677 3.5e-138 495.0 253 97.6
C07p08630 Brassica napus HOM05D005496 ORTHO05D006677 6.0e-138 494.2 253 96.0
AL3G46950 Arabidopsis lyrata HOM05D005496 ORTHO05D006677 1.0e-137 493.4 253 96.8
BolC9t54157H Brassica oleracea HOM05D005496 ORTHO05D006677 1.3e-137 493.0 252 97.6
Carub.0003s2908 Capsella rubella HOM05D005496 ORTHO05D006677 1.1e-136 490.0 253 95.7
AT2G15240 Arabidopsis thaliana HOM05D005496 ORTHO05D006677 5.6e-136 487.6 253 95.7
A07p05380 Brassica napus HOM05D005496 ORTHO05D006677 2.9e-132 475.3 255 92.5
BraA07t28330Z Brassica rapa HOM05D005496 ORTHO05D006677 2.9e-132 475.3 256 92.2
BolC7t41274H Brassica oleracea HOM05D005496 ORTHO05D006677 3.2e-131 471.9 239 95.8
THA.LOC104807241 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 2.7e-130 468.8 253 91.3
THA.LOC104819553 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 8.6e-129 463.8 253 90.5
CiPaw.06G169300 Carya illinoinensis HOM05D005496 ORTHO05D006677 5.6e-128 461.1 254 88.6
Cpa.g.sc106.90 Carica papaya HOM05D005496 ORTHO05D006677 9.6e-128 460.3 253 87.7
Atru.chr5.2543 Acer truncatum HOM05D005496 ORTHO05D006677 1.1e-126 456.8 254 87.0
Atru.chr5.2566 Acer truncatum HOM05D005496 ORTHO05D006677 1.1e-126 456.8 254 87.0
TWI75G0729 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 4.0e-126 454.9 253 87.7
TWI79G0817 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 5.2e-126 454.5 253 87.7
MD05G1089700 Malus domestica HOM05D005496 ORTHO05D006677 6.9e-126 454.1 252 86.1
ClCG02G006320 Citrullus lanatus HOM05D005496 ORTHO05D006677 1.5e-125 453.0 253 85.8
A09p10680 Brassica napus HOM05D005496 ORTHO05D006677 2.6e-125 452.2 231 97.4
C09p12670 Brassica napus HOM05D005496 ORTHO05D006677 2.6e-125 452.2 231 97.4
CsaV3_7G008130 Cucumis sativus L. HOM05D005496 ORTHO05D006677 3.4e-125 451.8 253 85.4
CiPaw.05G011600 Carya illinoinensis HOM05D005496 ORTHO05D006677 7.6e-125 450.7 254 87.4
Gohir.D12G022500 Gossypium hirsutum HOM05D005496 ORTHO05D006677 1.7e-124 449.5 253 84.6
Prupe.8G135000 Prunus persica HOM05D005496 ORTHO05D006677 1.7e-124 449.5 252 84.9
Thecc.02G107900 Theobroma cacao HOM05D005496 ORTHO05D006677 1.7e-124 449.5 253 85.0
MELO3C018493.2 Cucumis melo HOM05D005496 ORTHO05D006677 2.2e-124 449.1 253 84.2
Gohir.A12G022100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.2e-124 449.1 253 84.6
Dinv15765 Davidia involucrata HOM05D005496 ORTHO05D006677 6.4e-124 447.6 253 85.4
Sed0023992 Sechium edule HOM05D005496 ORTHO05D006677 8.4e-124 447.2 253 83.0
Potri.009G095900 Populus trichocarpa HOM05D005496 ORTHO05D006677 1.1e-123 446.8 255 86.7
FvH4_2g05170 Fragaria vesca HOM05D005496 ORTHO05D006677 2.4e-123 445.7 254 85.4
Sed0010088 Sechium edule HOM05D005496 ORTHO05D006677 2.4e-123 445.7 254 84.3
Lalb_Chr06g0165461 Lupinus albus HOM05D005496 ORTHO05D006677 5.4e-123 444.5 253 85.0
MD10G1096900 Malus domestica HOM05D005496 ORTHO05D006677 5.4e-123 444.5 252 84.1
Manes.07G069764 Manihot esculenta HOM05D005496 ORTHO05D006677 5.4e-123 444.5 253 85.0
Dinv42193 Davidia involucrata HOM05D005496 ORTHO05D006677 7.1e-123 444.1 253 85.0
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 9.3e-123 443.7 250 90.0
RcHm_v2.0_Chr6g0255081 Rosa chinensis HOM05D005496 ORTHO05D006677 9.3e-123 443.7 254 84.6
CARHR105630 Cardamine hirsuta HOM05D005496 ORTHO05D006677 1.6e-122 443.0 225 95.6
CSS0023946 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 2.7e-122 442.2 250 84.8
CSS0028960 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 2.7e-122 442.2 250 84.8
CANSAT25G1824 Cannabis sativa HOM05D005496 ORTHO05D006677 2.7e-122 442.2 255 83.1
CANSAT25G2648 Cannabis sativa HOM05D005496 ORTHO05D006677 2.7e-122 442.2 255 83.1
BraA09t36711Z Brassica rapa HOM05D005496 ORTHO05D006677 2.3e-121 439.1 254 88.6
Eucgr.E02959 Eucalyptus grandis HOM05D005496 ORTHO05D006677 3.0e-121 438.7 253 83.8
PGR142G1113 Punica granatum HOM05D005496 ORTHO05D006677 3.9e-121 438.3 253 82.6
GSVIVG01003155001 Vitis vinifera HOM05D005496 ORTHO05D006677 5.1e-121 438.0 257 83.7
Phvul.007G039900 Phaseolus vulgaris HOM05D005496 ORTHO05D006677 6.6e-121 437.6 256 82.8
DCAR_021987 Daucus carota HOM05D005496 ORTHO05D006677 8.7e-121 437.2 253 82.2
Sc18g0005590 Simmondsia chinensis HOM05D005496 ORTHO05D006677 3.3e-120 435.3 254 83.9
Actinidia17481 Actinidia chinensis HOM05D005496 ORTHO05D006677 5.6e-120 434.5 253 83.0
CSS0021038 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 5.6e-120 434.5 253 82.2
Glyma.10G262300 Glycine max HOM05D005496 ORTHO05D006677 7.3e-120 434.1 256 82.4
FAN27G2869 Fragaria x ananassa HOM05D005496 ORTHO05D006677 9.6e-120 433.7 275 79.3
Lalb_Chr21g0308341 Lupinus albus HOM05D005496 ORTHO05D006677 3.6e-119 431.8 258 81.8
Potri.001G300100 Populus trichocarpa HOM05D005496 ORTHO05D006677 3.6e-119 431.8 255 83.9
Lj5g0001757 Lotus japonicus HOM05D005496 ORTHO05D006677 6.2e-119 431.0 253 81.8
PGSC0003DMG402025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 1.4e-118 429.9 254 82.3
Gohir.D01G008100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 1.8e-118 429.5 253 81.4
Sopen01g049790 Solanum pennellii HOM05D005496 ORTHO05D006677 1.8e-118 429.5 254 81.9
PSO675G7162 Papaver somniferum HOM05D005496 ORTHO05D006677 3.1e-118 428.7 249 82.3
Migut.N01167 Erythranthe guttata HOM05D005496 ORTHO05D006677 4.0e-118 428.3 254 79.9
Solyc01g107600.3 Solanum lycopersicum HOM05D005496 ORTHO05D006677 4.0e-118 428.3 254 81.9
Medtr1g107430 Medicago truncatula HOM05D005496 ORTHO05D006677 5.3e-118 427.9 258 81.8
PSO541G0750 Papaver somniferum HOM05D005496 ORTHO05D006677 9.0e-118 427.2 249 83.1
TPR.G30567 Trifolium pratense HOM05D005496 ORTHO05D006677 1.2e-117 426.8 257 81.3
arahy.Tifrunner.gnm1.ann1.7NM92S Arachis hypogaea HOM05D005496 ORTHO05D006677 1.5e-117 426.4 256 82.0
Ca_11075_v3 Cicer arietinum L. HOM05D005496 ORTHO05D006677 2.6e-117 425.6 257 81.3
TAR376G0359 Trochodendron aralioides HOM05D005496 ORTHO05D006677 3.4e-117 425.2 249 81.5
arahy.Tifrunner.gnm1.ann1.CE7Z9D Arachis hypogaea HOM05D005496 ORTHO05D006677 4.5e-117 424.9 256 81.6
MSTRG.27744 Avicennia marina HOM05D005496 ORTHO05D006677 5.8e-117 424.5 254 80.7
MSTRG.5341 Avicennia marina HOM05D005496 ORTHO05D006677 5.8e-117 424.5 250 80.8
Cc02_g19260 Coffea canephora HOM05D005496 ORTHO05D006677 7.6e-117 424.1 262 80.5
Glyma.20G128700 Glycine max HOM05D005496 ORTHO05D006677 7.6e-117 424.1 259 79.9
TAR628G1491 Trochodendron aralioides HOM05D005496 ORTHO05D006677 2.2e-116 422.5 249 79.9
Gorai.002G009400 Gossypium raimondii HOM05D005496 ORTHO05D006677 4.9e-116 421.4 253 79.8
Actinidia27972 Actinidia chinensis HOM05D005496 ORTHO05D006677 6.4e-116 421.0 280 74.6
Peaxi162Scf00016g02325 Petunia axillaris HOM05D005496 ORTHO05D006677 1.9e-115 419.5 281 75.1
Rhsim11G0160100 Rhododendron simsii HOM05D005496 ORTHO05D006677 9.3e-115 417.2 294 72.1
Aa31LG8G13100 Aethionema arabicum HOM05D005496 ORTHO05D006677 3.5e-114 415.2 255 85.5
Aqoxy6G02861 Aquilegia oxysepala HOM05D005496 ORTHO05D006677 7.9e-114 414.1 249 78.3
ATR0691G184 Amborella trichopoda HOM05D005496 ORTHO05D006677 5.3e-110 401.4 248 76.6
ECA236G0884 Erigeron canadensis HOM05D005496 ORTHO05D006677 5.3e-110 401.4 250 76.8
HanXRQChr16g0509221 Helianthus annuus HOM05D005496 ORTHO05D006677 1.2e-109 400.2 250 75.6
HanXRQChr10g0292361 Helianthus annuus HOM05D005496 ORTHO05D006677 9.9e-109 397.1 250 76.0
FAN15G3658 Fragaria x ananassa HOM05D005496 ORTHO05D006677 2.2e-108 396.0 252 78.2
BcaB03g16270 Brassica carinata HOM05D005496 ORTHO05D006677 5.6e-104 381.3 251 79.3
Duzib052G0798 Durio zibethinus HOM05D005496 ORTHO05D006677 5.6e-104 381.3 253 75.1
FAN24G2091 Fragaria x ananassa HOM05D005496 ORTHO05D006677 1.6e-103 379.8 254 76.4
Os09g0109500 Oryza sativa ssp. japonica HOM05D005496 ORTHO05D006677 1.4e-102 376.7 248 74.2
QL11p033686 Quercus lobata HOM05D005496 ORTHO05D006677 1.4e-102 376.7 452 48.7
Lsat_1_v5_gn_7_86500 Lactuca sativa HOM05D005496 ORTHO05D006677 9.0e-102 374.0 222 78.8
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 1.7e-100 369.8 199 91.0
Ciclev10029109m.g Citrus clementina HOM05D005496 ORTHO05D006677 5.5e-99 364.8 208 83.2
Nn5g30423 Nelumbo nucifera HOM05D005496 ORTHO05D006677 6.0e-98 361.3 249 70.3
Sabra16G0188400 Salix brachista HOM05D005496 ORTHO05D006677 5.1e-97 358.2 283 68.6
Pp3c22_1600 Physcomitrium patens HOM05D005496 ORTHO05D006677 8.7e-97 357.5 249 68.7
Gorai.008G022900 Gossypium raimondii HOM05D005496 ORTHO05D006677 3.3e-96 355.5 248 72.6
Psat6g219080 Pisum sativum HOM05D005496 ORTHO05D006677 1.6e-95 353.2 211 82.0
Gohir.A01G008000 Gossypium hirsutum HOM05D005496 ORTHO05D006677 3.7e-95 352.1 257 71.2
Pp3c21_16720 Physcomitrium patens HOM05D005496 ORTHO05D006677 4.8e-95 351.7 249 67.9
Mapoly0001s0126 Marchantia polymorpha HOM05D005496 ORTHO05D006677 1.7e-92 343.2 249 66.3
Hund00151 Selenicereus undatus HOM05D005496 ORTHO05D006677 2.7e-90 335.9 194 82.5
Zm00001eb307360 Zea mays HOM05D005496 ORTHO05D006677 6.7e-89 331.3 248 68.5
Duzib132G0296 Durio zibethinus HOM05D005496 ORTHO05D006677 1.9e-88 329.7 253 67.6
SMO358G0568 Selaginella moellendorffii HOM05D005496 ORTHO05D006677 3.3e-88 328.9 249 65.1
unitig_699.g19872 Utricularia gibba HOM05D005496 ORTHO05D006677 1.8e-86 323.2 208 73.1
AagrBONN_evm.TU.Sc2ySwM_228.4354 Anthoceros agrestis HOM05D005496 ORTHO05D006677 2.4e-86 322.8 236 65.7
Actinidia00410 Actinidia chinensis HOM05D005496 ORTHO05D006677 5.9e-85 318.2 241 68.0
AUR62039077 Chenopodium quinoa HOM05D005496 ORTHO05D006677 1.4e-83 313.5 268 62.7
Lj5C214T6 Lonicera japonica HOM05D005496 ORTHO05D006677 3.6e-82 308.9 206 76.2
Actinidia05496 Actinidia chinensis HOM05D005496 ORTHO05D006677 6.9e-78 294.7 270 58.9
vmacro02003 Vaccinium macrocarpon HOM05D005496 ORTHO05D006677 2.6e-77 292.7 336 53.0
CDE02G0272 Ceratophyllum demersum HOM05D005496 ORTHO05D006677 2.9e-76 289.3 249 57.8
EL10Ac9g22275 Beta vulgaris HOM05D005496 ORTHO05D006677 1.6e-74 283.5 161 85.1
Nitab4.5_0002815g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 1.4e-73 280.4 253 62.5
PGSC0003DMG401025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 2.0e-72 276.6 208 68.3
SGA_v2.0_scaffold13G06610 Striga asiatica HOM05D005496 ORTHO05D006677 4.4e-72 275.4 161 82.6
Cre06.g250350 Chlamydomonas reinhardtii HOM05D005496 ORTHO05D006677 1.2e-69 267.3 241 52.7
AUR62010309 Chenopodium quinoa HOM05D005496 ORTHO05D006677 2.6e-69 266.2 207 65.7
Sabra09G0073700 Salix brachista HOM05D005496 ORTHO05D006677 5.0e-68 261.9 286 52.4
MCO15G042 Micromonas commoda HOM05D005496 ORTHO05D006677 1.5e-64 250.4 228 51.8
PRCOL_00006227 Prasinoderma coloniale HOM05D005496 ORTHO05D006677 7.5e-64 248.1 229 53.7
FAN20G2824 Fragaria x ananassa HOM05D005496 ORTHO05D006677 4.1e-62 242.3 145 84.1
Oeu056146.1 Olea europaea HOM05D005496 ORTHO05D006677 5.3e-62 241.9 170 70.0
SalBow3G0726 Salvia bowleyana HOM05D005496 ORTHO05D006677 2.7e-58 229.6 206 57.8
Ah.01g018260 Amaranthus hybridus HOM05D005496 ORTHO05D006677 1.4e-57 227.3 175 66.9
BolC7t41273H Brassica oleracea HOM05D005496 ORTHO05D006677 8.8e-57 224.6 115 93.9
HPP92_011625 Vanilla planifolia HOM05D005496 ORTHO05D006677 1.1e-51 207.6 146 65.8
SEGI_40705 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 1.7e-44 183.7 112 75.0
Haze_10172 Corylus avellana HOM05D005496 ORTHO05D006677 2.8e-42 176.4 133 70.7
SEGI_21612 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 8.6e-36 154.8 91 75.8
COL.COLO4_32594 Corchorus olitorius HOM05D005496 ORTHO05D006677 2.0e-32 143.7 174 47.1
CBR_g4069 Chara braunii HOM05D005496 ORTHO05D006677 3.2e-30 136.3 93 68.8
Nitab4.5_0005392g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 5.4e-30 135.6 253 40.7
CBR_g4071 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-28 131.0 102 65.7
HPP92_026155 Vanilla planifolia HOM05D005496 ORTHO05D006677 5.6e-11 72.4 52 65.4


User provided reference genes

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