Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10022484m.g Eutrema salsugineum HOM05D009566 ORTHO05D007629 2.6e-133 478.8 254 100.0
C02p21140 Brassica napus HOM05D009566 ORTHO05D007629 7.2e-75 284.6 291 60.8
A02p13020 Brassica napus HOM05D009566 ORTHO05D007629 8.0e-74 281.2 293 61.1
BcaC03g14675 Brassica carinata HOM05D009566 ORTHO05D007629 7.5e-72 274.6 332 54.5
BolC2t08254H Brassica oleracea HOM05D009566 ORTHO05D007629 4.8e-71 271.9 333 54.1
BraA02t06358Z Brassica rapa HOM05D009566 ORTHO05D007629 3.8e-68 262.3 348 51.7
AL2G19730 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 8.0e-66 254.6 327 53.8
AT1G65090 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 1.8e-65 253.4 301 57.1
Sp5g19730 Schrenkiella parvula HOM05D009566 ORTHO05D007629 2.9e-55 219.5 206 64.6
BcaB05g24082 Brassica carinata HOM05D009566 ORTHO05D007629 8.3e-55 218.0 344 47.1
CARHR056580 Cardamine hirsuta HOM05D009566 ORTHO05D007629 4.4e-32 142.5 204 51.0
CARHR216660 Cardamine hirsuta HOM05D009566 ORTHO05D007629 2.2e-31 140.2 294 40.5
Thhalv10005424m.g Eutrema salsugineum HOM05D009566 ORTHO05D007629 1.4e-30 137.5 304 40.1
Carub.0002s1043 Capsella rubella HOM05D009566 ORTHO05D007629 1.5e-27 127.5 220 48.2
THA.LOC104823805 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 1.5e-27 127.5 370 34.3
AT5G36100 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 1.9e-27 127.1 305 39.7
Carub.0007s3177 Capsella rubella HOM05D009566 ORTHO05D007629 7.3e-27 125.2 301 39.2
Sp7g06100 Schrenkiella parvula HOM05D009566 ORTHO05D007629 1.8e-25 120.6 320 35.9
BcaC02g09508 Brassica carinata HOM05D009566 ORTHO05D007629 4.9e-23 112.5 316 36.1
BolC4t25935H Brassica oleracea HOM05D009566 ORTHO05D007629 1.2e-21 107.8 317 35.3
A04p10080 Brassica napus HOM05D009566 ORTHO05D007629 4.6e-21 105.9 318 34.9
BraA04t16670Z Brassica rapa HOM05D009566 ORTHO05D007629 1.3e-20 104.4 321 34.9
C04p43550 Brassica napus HOM05D009566 ORTHO05D007629 1.5e-19 100.9 312 34.0
Aa31LG2G2280 Aethionema arabicum HOM05D009566 ORTHO05D007629 2.5e-19 100.1 340 32.9
BcaB06g27006 Brassica carinata HOM05D009566 ORTHO05D007629 2.5e-19 100.1 318 34.0
BcaB02g08045 Brassica carinata HOM05D009566 ORTHO05D007629 8.1e-18 95.1 280 37.9
Aa31LG9G17880 Aethionema arabicum HOM05D009566 ORTHO05D007629 2.9e-15 86.7 359 30.1
THA.LOC104821804 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 4.3e-11 72.8 273 31.9
Manes.08G105000 Manihot esculenta HOM05D007504 ORTHO05D007629 2.8e-10 70.1 387 25.6
AL7G45070 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 8.1e-10 68.6 151 37.7
Thecc.05G204700 Theobroma cacao HOM05D007504 ORTHO05D007629 1.7e-07 60.8 78 46.2
Eucgr.H01377 Eucalyptus grandis HOM05D007504 ORTHO05D007629 2.9e-07 60.1 187 27.8
Atru.chr12.1547 Acer truncatum HOM05D007504 ORTHO05D007629 1.1e-06 58.2 78 44.9
FAN14G3522 Fragaria x ananassa HOM05D007504 ORTHO05D007629 1.9e-06 57.4 78 43.6
FAN09G1848 Fragaria x ananassa HOM05D007504 ORTHO05D007629 2.4e-06 57.0 172 32.6
Cpa.g.sc123.14 Carica papaya HOM05D007504 ORTHO05D007629 3.2e-06 56.6 78 43.6
FvH4_6g00830 Fragaria vesca HOM05D007504 ORTHO05D007629 3.2e-06 56.6 78 43.6
SalBow6G5451 Salvia bowleyana HOM05D007504 ORTHO05D007629 4.2e-06 56.2 300 27.7
CSS0029071 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 9.3e-06 55.1 78 41.0
Migut.F01885 Erythranthe guttata HOM05D007504 ORTHO05D007629 9.3e-06 55.1 101 35.6


User provided reference genes

Program Settings