Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10022094m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.1e-56 223.0 110 100.0
Thhalv10023979m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.0e-54 216.5 110 97.3
Thhalv10028140m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 5.4e-43 177.6 114 80.7
Sp7g03520 Schrenkiella parvula HOM05D000161 ORTHO05D000111 2.6e-29 132.1 112 63.4
AL2G13820 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.2e-26 123.2 112 60.7
AL2G14070 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 7.8e-26 120.6 111 60.4
AL2G14080 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.7e-25 119.4 111 61.3
AL2G14100 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 3.0e-25 118.6 111 58.6
Thhalv10023447m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 8.6e-25 117.1 113 60.2
AL2G13990 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 3.3e-24 115.2 112 58.9
Carub.0002s0311 Capsella rubella HOM05D000161 ORTHO05D000111 1.2e-23 113.2 112 54.5
Sp2g02100 Schrenkiella parvula HOM05D000161 ORTHO05D000111 1.6e-23 112.8 113 53.1
AL2G13900 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 3.6e-23 111.7 113 53.1
Carub.0002s0310 Capsella rubella HOM05D000161 ORTHO05D000111 3.6e-23 111.7 111 55.9
Carub.0002s0294 Capsella rubella HOM05D000161 ORTHO05D000111 4.7e-23 111.3 112 58.0
Carub.0002s0295 Capsella rubella HOM05D000161 ORTHO05D000111 4.7e-23 111.3 112 57.1
Thhalv10023445m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.8e-22 109.4 111 54.1
AL2G13840 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.4e-22 109.0 111 55.9
BcaB08g34472 Brassica carinata HOM05D000161 ORTHO05D000111 4.0e-22 108.2 112 55.4
BraA09t37293Z Brassica rapa HOM05D000161 ORTHO05D000111 4.0e-22 108.2 115 52.2
BcaB07g31296 Brassica carinata HOM05D000161 ORTHO05D000111 6.8e-22 107.5 114 51.8
CARHR049970 Cardamine hirsuta HOM05D000161 ORTHO05D000111 6.8e-22 107.5 111 53.2
BcaB07g31302 Brassica carinata HOM05D000161 ORTHO05D000111 8.9e-22 107.1 117 51.3
A09p16570 Brassica napus HOM05D000161 ORTHO05D000111 1.2e-21 106.7 118 50.8
BcaC04g22370 Brassica carinata HOM05D000161 ORTHO05D000111 2.0e-21 105.9 117 50.4
C09p20080 Brassica napus HOM05D000161 ORTHO05D000111 2.0e-21 105.9 117 50.4
BolC9t54916H Brassica oleracea HOM05D000161 ORTHO05D000111 2.0e-21 105.9 117 50.4
Sp2g02560 Schrenkiella parvula HOM05D000161 ORTHO05D000111 4.4e-21 104.8 113 55.8
BcaC06g31903 Brassica carinata HOM05D000161 ORTHO05D000111 5.8e-21 104.4 113 53.1
CARHR050220 Cardamine hirsuta HOM05D000161 ORTHO05D000111 5.8e-21 104.4 112 53.6
Thhalv10023838m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 5.8e-21 104.4 110 52.7
BcaB07g31299 Brassica carinata HOM05D000161 ORTHO05D000111 9.9e-21 103.6 112 52.7
BcaB04g20384 Brassica carinata HOM05D000161 ORTHO05D000111 1.3e-20 103.2 113 51.3
A09p16580 Brassica napus HOM05D000161 ORTHO05D000111 1.7e-20 102.8 112 53.6
CARHR050000 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.7e-20 102.8 112 53.6
Sp5g14790 Schrenkiella parvula HOM05D000161 ORTHO05D000111 1.7e-20 102.8 112 54.5
AT1G62120 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 2.9e-20 102.1 112 52.7
Thhalv10023505m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 8.4e-20 100.5 117 48.7
C01p39170 Brassica napus HOM05D000161 ORTHO05D000111 1.4e-19 99.8 115 49.6
Thhalv10023457m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.4e-19 99.8 112 49.1
Carub.0002s0305 Capsella rubella HOM05D000161 ORTHO05D000111 3.2e-19 98.6 108 52.8
BolC3t17768H Brassica oleracea HOM05D000161 ORTHO05D000111 5.4e-19 97.8 108 50.9
CARHR050060 Cardamine hirsuta HOM05D000161 ORTHO05D000111 5.4e-19 97.8 109 50.5
BcaC04g22367 Brassica carinata HOM05D000161 ORTHO05D000111 1.2e-18 96.7 112 50.9
BcaC06g31880 Brassica carinata HOM05D000161 ORTHO05D000111 1.2e-18 96.7 116 51.7
C09p20110 Brassica napus HOM05D000161 ORTHO05D000111 1.2e-18 96.7 112 50.9
Sp2g02110 Schrenkiella parvula HOM05D000161 ORTHO05D000111 1.6e-18 96.3 112 53.6
AL2G14050 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.7e-18 95.5 108 50.9
BcaC05g30109 Brassica carinata HOM05D000161 ORTHO05D000111 2.7e-18 95.5 106 50.9
C05p61650 Brassica napus HOM05D000161 ORTHO05D000111 2.7e-18 95.5 106 50.9
BolC5t34823H Brassica oleracea HOM05D000161 ORTHO05D000111 2.7e-18 95.5 106 50.9
C03p71120 Brassica napus HOM05D000161 ORTHO05D000111 3.5e-18 95.1 103 53.4
BolC3t19397H Brassica oleracea HOM05D000161 ORTHO05D000111 3.5e-18 95.1 103 53.4
BcaC06g31881 Brassica carinata HOM05D000161 ORTHO05D000111 4.6e-18 94.7 112 50.9
A01p30850 Brassica napus HOM05D000161 ORTHO05D000111 6.0e-18 94.4 111 50.5
AT1G61990 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 7.8e-18 94.0 108 49.1
BcaC06g31876 Brassica carinata HOM05D000161 ORTHO05D000111 7.8e-18 94.0 112 52.7
A06p20610 Brassica napus HOM05D000161 ORTHO05D000111 7.8e-18 94.0 103 52.4
CARHR049980 Cardamine hirsuta HOM05D000161 ORTHO05D000111 7.8e-18 94.0 116 50.0
BraA05t22959Z Brassica rapa HOM05D000161 ORTHO05D000111 1.0e-17 93.6 106 50.0
BcaC02g10507 Brassica carinata HOM05D000161 ORTHO05D000111 1.3e-17 93.2 112 50.9
BcaC05g30156 Brassica carinata HOM05D000161 ORTHO05D000111 1.3e-17 93.2 106 49.1
C04p28130 Brassica napus HOM05D000161 ORTHO05D000111 1.3e-17 93.2 112 50.9
BolC4t24356H Brassica oleracea HOM05D000161 ORTHO05D000111 1.3e-17 93.2 112 50.9
C01p39210 Brassica napus HOM05D000161 ORTHO05D000111 1.7e-17 92.8 111 50.5
A03p67460 Brassica napus HOM05D000161 ORTHO05D000111 2.3e-17 92.4 113 50.4
BraA01t02725Z Brassica rapa HOM05D000161 ORTHO05D000111 2.3e-17 92.4 113 50.4
Aa31LG2G8900 Aethionema arabicum HOM05D000316 ORTHO05D000111 3.0e-17 92.0 106 49.1
BraA06t25140Z Brassica rapa HOM05D000161 ORTHO05D000111 3.9e-17 91.7 103 50.5
BcaB07g31330 Brassica carinata HOM05D000161 ORTHO05D000111 6.6e-17 90.9 113 48.7
BolC1t03868H Brassica oleracea HOM05D000161 ORTHO05D000111 8.7e-17 90.5 105 49.5
BraA09t36957Z Brassica rapa HOM05D000161 ORTHO05D000111 8.7e-17 90.5 110 48.2
AT1G62490 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 1.5e-16 89.7 106 48.1
Sp2g02580 Schrenkiella parvula HOM05D000161 ORTHO05D000111 1.9e-16 89.4 111 48.6
AL2G14090 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 3.3e-16 88.6 116 48.3
AT1G62150 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 4.3e-16 88.2 112 45.5
Carub.0006s2165 Capsella rubella HOM05D000161 ORTHO05D000111 4.3e-16 88.2 103 48.5
BcaC04g22407 Brassica carinata HOM05D000161 ORTHO05D000111 5.6e-16 87.8 112 45.5
C09p19700 Brassica napus HOM05D000161 ORTHO05D000111 5.6e-16 87.8 112 45.5
BolC9t54872H Brassica oleracea HOM05D000161 ORTHO05D000111 9.6e-16 87.0 112 47.3
Carub.0002s0249 Capsella rubella HOM05D000161 ORTHO05D000111 9.6e-16 87.0 113 44.2
BcaC04g22764 Brassica carinata HOM05D000161 ORTHO05D000111 1.2e-15 86.7 110 47.3
C09p15550 Brassica napus HOM05D000161 ORTHO05D000111 1.2e-15 86.7 110 47.3
CARHR050330 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.6e-15 86.3 114 48.2
Thhalv10024090m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.6e-15 86.3 112 49.1
A09p16240 Brassica napus HOM05D000161 ORTHO05D000111 2.1e-15 85.9 116 47.4
A09p13110 Brassica napus HOM05D000161 ORTHO05D000111 2.8e-15 85.5 110 47.3
Thhalv10023868m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 2.8e-15 85.5 76 60.5
AT5G23930 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 4.7e-15 84.7 103 45.6
BraA09t37261Z Brassica rapa HOM05D000161 ORTHO05D000111 6.2e-15 84.3 112 45.5
AL6G35250 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.1e-14 83.6 103 46.6
BcaB04g20385 Brassica carinata HOM05D000161 ORTHO05D000111 1.4e-14 83.2 108 44.4
Sp2g02590 Schrenkiella parvula HOM05D000161 ORTHO05D000111 1.8e-14 82.8 101 50.5
AL5G44270 Arabidopsis lyrata HOM05D000144 ORTHO05D000111 2.4e-14 82.4 109 46.8
C01p39160 Brassica napus HOM05D000161 ORTHO05D000111 4.0e-14 81.6 97 47.4
Carub.0002s0308 Capsella rubella HOM05D000161 ORTHO05D000111 5.2e-14 81.3 111 44.1
Sp2g23340 Schrenkiella parvula HOM05D000161 ORTHO05D000111 5.2e-14 81.3 112 43.8
AT1G62010 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 2.6e-13 79.0 108 46.3
BcaNung01197 Brassica carinata HOM05D000161 ORTHO05D000111 2.6e-13 79.0 103 42.7
CARHR050310 Cardamine hirsuta HOM05D000161 ORTHO05D000111 2.6e-13 79.0 92 51.1
CARHR050320 Cardamine hirsuta HOM05D000161 ORTHO05D000111 3.4e-13 78.6 111 42.3
C07p43750 Brassica napus HOM05D000161 ORTHO05D000111 4.4e-13 78.2 109 41.3
BolC7t44904H Brassica oleracea HOM05D000161 ORTHO05D000111 4.4e-13 78.2 109 41.3
Carub.0002s0309 Capsella rubella HOM05D000161 ORTHO05D000111 5.8e-13 77.8 112 42.0
BcaNung01835 Brassica carinata HOM05D000161 ORTHO05D000111 7.6e-13 77.4 103 42.7
BraA06t26401Z Brassica rapa HOM05D000161 ORTHO05D000111 7.6e-13 77.4 103 42.7
AT1G62085 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 1.7e-12 76.3 112 40.2
A06p34730 Brassica napus HOM05D000161 ORTHO05D000111 1.7e-12 76.3 103 41.7
C03p54760 Brassica napus HOM05D000161 ORTHO05D000111 1.7e-12 76.3 112 44.6
Thhalv10023461m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.7e-12 76.3 112 42.9
BraA01t03211Z Brassica rapa HOM05D000161 ORTHO05D000111 3.8e-12 75.1 115 40.0
CARHR049990 Cardamine hirsuta HOM05D000161 ORTHO05D000111 3.8e-12 75.1 114 44.7
Thhalv10004187m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 4.9e-12 74.7 111 41.4
A01p30830 Brassica napus HOM05D000161 ORTHO05D000111 6.4e-12 74.3 115 40.0
A03p67410 Brassica napus HOM05D000161 ORTHO05D000111 6.4e-12 74.3 112 43.8
BraA01t02734Z Brassica rapa HOM05D000161 ORTHO05D000111 6.4e-12 74.3 112 43.8
Carub.0002s0306 Capsella rubella HOM05D000161 ORTHO05D000111 6.4e-12 74.3 111 41.4
Thhalv10023470m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 6.4e-12 74.3 112 42.0
Thhalv10023911m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.1e-11 73.6 97 42.3
CARHR050020 Cardamine hirsuta HOM05D000161 ORTHO05D000111 3.2e-11 72.0 112 41.1
AL2G13770 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 5.4e-11 71.2 112 38.4
AT1G61960 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 7.1e-11 70.9 75 52.0
CARHR050280 Cardamine hirsuta HOM05D000161 ORTHO05D000111 9.3e-11 70.5 116 38.8
Thhalv10023467m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.2e-10 70.1 112 38.4
AL2G14110 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.6e-10 69.7 110 40.0
AT1G61970 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 2.7e-10 68.9 111 42.3
CARHR155600 Cardamine hirsuta HOM05D000161 ORTHO05D000111 2.7e-10 68.9 111 39.6
AL2G13790 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 3.5e-10 68.6 112 38.4
C01p39190 Brassica napus HOM05D000161 ORTHO05D000111 4.6e-10 68.2 113 39.8
BolC1t03869H Brassica oleracea HOM05D000161 ORTHO05D000111 4.6e-10 68.2 113 39.8
Sp3g04430 Schrenkiella parvula HOM05D000161 ORTHO05D000111 4.6e-10 68.2 116 39.7
CARHR050160 Cardamine hirsuta HOM05D000161 ORTHO05D000111 6.0e-10 67.8 111 40.5
Sp2g02550 Schrenkiella parvula HOM05D000161 ORTHO05D000111 6.0e-10 67.8 113 41.6
AT1G62110 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 7.8e-10 67.4 80 51.2
Carub.0005s1597 Capsella rubella HOM05D000161 ORTHO05D000111 7.8e-10 67.4 118 38.1
Sp2g02610 Schrenkiella parvula HOM05D000161 ORTHO05D000111 1.0e-09 67.0 83 44.6
BcaC02g10512 Brassica carinata HOM05D000161 ORTHO05D000111 1.3e-09 66.6 83 44.6
BcaC06g31879 Brassica carinata HOM05D000161 ORTHO05D000111 1.3e-09 66.6 112 35.7
C04p28060 Brassica napus HOM05D000161 ORTHO05D000111 1.3e-09 66.6 83 44.6
BolC4t24350H Brassica oleracea HOM05D000161 ORTHO05D000111 1.3e-09 66.6 83 44.6
Thhalv10024167m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.7e-09 66.2 117 33.3
AL5G26170 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.3e-09 65.9 111 40.5
AT1G61980 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 2.3e-09 65.9 111 39.6
CARHR189630 Cardamine hirsuta HOM05D000161 ORTHO05D000111 3.0e-09 65.5 108 39.8
Thhalv10019750m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 3.0e-09 65.5 113 35.4
AL2G21920 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.1e-08 63.5 78 47.4
BcaC02g10522 Brassica carinata HOM05D000161 ORTHO05D000111 1.1e-08 63.5 79 46.8
C04p27930 Brassica napus HOM05D000161 ORTHO05D000111 1.1e-08 63.5 79 46.8
BolC4t24337H Brassica oleracea HOM05D000161 ORTHO05D000111 1.1e-08 63.5 79 46.8
BolC9t54920H Brassica oleracea HOM05D000161 ORTHO05D000111 1.5e-08 63.2 112 37.5
Thhalv10022427m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.5e-08 63.2 92 42.4
AL2G13930 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.9e-08 62.8 105 39.0
BraA03t13562Z Brassica rapa HOM05D000161 ORTHO05D000111 1.9e-08 62.8 108 37.0
CARHR050290 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.9e-08 62.8 117 37.6
BraA09t36958Z Brassica rapa HOM05D000161 ORTHO05D000111 3.3e-08 62.0 111 36.0
BcaC04g22364 Brassica carinata HOM05D000161 ORTHO05D000111 4.3e-08 61.6 111 34.2
BcaC04g22763 Brassica carinata HOM05D000161 ORTHO05D000111 4.3e-08 61.6 142 31.0
A01p30840 Brassica napus HOM05D000161 ORTHO05D000111 4.3e-08 61.6 113 38.1
C09p15560 Brassica napus HOM05D000161 ORTHO05D000111 4.3e-08 61.6 142 31.0
C09p20140 Brassica napus HOM05D000161 ORTHO05D000111 4.3e-08 61.6 111 34.2
BolC9t54461H Brassica oleracea HOM05D000161 ORTHO05D000111 4.3e-08 61.6 142 31.0
A09p16550 Brassica napus HOM05D000161 ORTHO05D000111 5.6e-08 61.2 118 38.1
A03p44330 Brassica napus HOM05D000161 ORTHO05D000111 7.3e-08 60.8 108 36.1
AL2G13950 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 9.6e-08 60.5 73 46.6
BcaB07g31298 Brassica carinata HOM05D000161 ORTHO05D000111 9.6e-08 60.5 78 43.6
BraA01t03212Z Brassica rapa HOM05D000161 ORTHO05D000111 9.6e-08 60.5 113 37.2
AT3G46950 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 1.3e-07 60.1 111 36.0
A09p13120 Brassica napus HOM05D000161 ORTHO05D000111 1.3e-07 60.1 111 35.1
Thhalv10023801m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.3e-07 60.1 112 39.3
BcaC04g22366 Brassica carinata HOM05D000161 ORTHO05D000111 1.6e-07 59.7 120 40.0
Thhalv10024133m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 2.8e-07 58.9 112 34.8
Carub.0002s0291 Capsella rubella HOM05D000161 ORTHO05D000111 1.1e-06 57.0 72 45.8
AL2G13390 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.4e-06 56.6 111 34.2
BcaC01g03202 Brassica carinata HOM05D000161 ORTHO05D000111 1.8e-06 56.2 39 74.4
Thhalv10024124m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 3.1e-06 55.5 112 37.5
BcaC01g03302 Brassica carinata HOM05D000161 ORTHO05D000111 5.3e-06 54.7 108 33.3
BolC3t17658H Brassica oleracea HOM05D000161 ORTHO05D000111 5.3e-06 54.7 108 33.3
Carub.0005s1317 Capsella rubella HOM05D000161 ORTHO05D000111 5.3e-06 54.7 52 55.8


User provided reference genes

Program Settings