Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10021952m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.6e-82 308.5 141 100.0
C03p44150 Brassica napus HOM05D000209 ORTHO05D000129 8.7e-30 134.0 179 43.0
BolC3t16690H Brassica oleracea HOM05D000209 ORTHO05D000129 8.7e-30 134.0 179 43.0
BcaB04g18597 Brassica carinata HOM05D000209 ORTHO05D000129 1.5e-29 133.3 185 43.2
BcaB04g21206 Brassica carinata HOM05D000209 ORTHO05D000129 5.7e-29 131.3 180 41.1
BraA03t12821Z Brassica rapa HOM05D000209 ORTHO05D000129 5.7e-29 131.3 178 41.6
BcaB04g18598 Brassica carinata HOM05D000209 ORTHO05D000129 1.6e-28 129.8 188 41.5
BcaC01g04181 Brassica carinata HOM05D000209 ORTHO05D000129 1.6e-28 129.8 180 43.3
C03p44170 Brassica napus HOM05D000209 ORTHO05D000129 1.6e-28 129.8 180 43.3
BcaB04g18601 Brassica carinata HOM05D000209 ORTHO05D000129 2.2e-28 129.4 180 42.8
BolC1t05397H Brassica oleracea HOM05D000209 ORTHO05D000129 2.2e-28 129.4 179 40.2
BolC1t05398H Brassica oleracea HOM05D000209 ORTHO05D000129 1.4e-27 126.7 180 42.2
BcaC01g04180 Brassica carinata HOM05D000209 ORTHO05D000129 4.1e-27 125.2 178 41.0
BcaC09g48091 Brassica carinata HOM05D000209 ORTHO05D000129 4.1e-27 125.2 180 41.7
A03p36560 Brassica napus HOM05D000209 ORTHO05D000129 4.1e-27 125.2 177 40.7
BolC3t16691H Brassica oleracea HOM05D000209 ORTHO05D000129 4.1e-27 125.2 178 41.0
BcaB05g22381 Brassica carinata HOM05D000209 ORTHO05D000129 5.3e-27 124.8 180 37.8
BraA01t04254Z Brassica rapa HOM05D000209 ORTHO05D000129 9.1e-27 124.0 180 40.0
A05p00430 Brassica napus HOM05D000209 ORTHO05D000129 1.5e-26 123.2 180 41.1
BraA05t19041Z Brassica rapa HOM05D000209 ORTHO05D000129 1.5e-26 123.2 180 41.1
A01p41820 Brassica napus HOM05D000209 ORTHO05D000129 2.6e-26 122.5 181 40.3
BcaB04g21208 Brassica carinata HOM05D000209 ORTHO05D000129 3.4e-26 122.1 178 37.6
A03p36550 Brassica napus HOM05D000209 ORTHO05D000129 3.4e-26 122.1 175 40.6
A03p36540 Brassica napus HOM05D000209 ORTHO05D000129 1.7e-25 119.8 179 40.8
BcaB04g21211 Brassica carinata HOM05D000209 ORTHO05D000129 2.2e-25 119.4 178 43.3
A01p41840 Brassica napus HOM05D000209 ORTHO05D000129 2.2e-25 119.4 180 41.1
BraA01t04255Z Brassica rapa HOM05D000209 ORTHO05D000129 5.0e-25 118.2 180 41.1
AT4G04690 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 6.5e-25 117.9 182 37.4
BcaC01g04182 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-24 117.1 171 40.4
BcaB04g18599 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-24 116.7 186 40.9
BcaB04g18600 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-24 116.7 186 40.9
BraA01t04256Z Brassica rapa HOM05D000209 ORTHO05D000129 2.5e-24 115.9 182 36.3
BraA03t12823Z Brassica rapa HOM05D000209 ORTHO05D000129 2.5e-24 115.9 171 40.4
BcaB03g16795 Brassica carinata HOM05D000209 ORTHO05D000129 4.2e-24 115.2 178 38.8
BcaB03g12436 Brassica carinata HOM05D000209 ORTHO05D000129 5.5e-24 114.8 176 42.0
C03p44180 Brassica napus HOM05D000209 ORTHO05D000129 7.2e-24 114.4 172 40.1
A01p41870 Brassica napus HOM05D000209 ORTHO05D000129 2.1e-23 112.8 182 36.3
BolC1t05399H Brassica oleracea HOM05D000209 ORTHO05D000129 2.7e-23 112.5 182 36.8
Carub.0006s3257 Capsella rubella HOM05D000209 ORTHO05D000129 4.6e-23 111.7 183 37.2
BcaB04g21210 Brassica carinata HOM05D000209 ORTHO05D000129 1.0e-22 110.5 179 38.0
Carub.0003s0788 Capsella rubella HOM05D000209 ORTHO05D000129 5.1e-22 108.2 171 35.7
BcaB03g12435 Brassica carinata HOM05D000209 ORTHO05D000129 8.8e-22 107.5 188 35.6
Sp3g20410 Schrenkiella parvula HOM05D000209 ORTHO05D000129 3.3e-21 105.5 179 35.8
AT3G08750 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.3e-20 103.6 173 37.0
BcaB04g21207 Brassica carinata HOM05D000209 ORTHO05D000129 1.3e-20 103.6 185 37.3
BolC1t05401H Brassica oleracea HOM05D000209 ORTHO05D000129 2.2e-20 102.8 185 37.8
BcaC05g29467 Brassica carinata HOM05D000209 ORTHO05D000129 3.7e-20 102.1 180 35.6
Carub.0006s3251 Capsella rubella HOM05D000209 ORTHO05D000129 3.7e-20 102.1 187 34.2
BcaC09g48096 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-19 100.1 185 37.3
BcaC09g48097 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-19 100.1 185 37.3
BcaC09g48098 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-19 100.1 185 37.3
BcaB03g15317 Brassica carinata HOM05D000209 ORTHO05D000129 4.1e-19 98.6 184 38.0
C05p57730 Brassica napus HOM05D000209 ORTHO05D000129 1.2e-18 97.1 182 35.2
BolC5t34430H Brassica oleracea HOM05D000209 ORTHO05D000129 1.2e-18 97.1 182 35.2
Carub.0006s3242 Capsella rubella HOM05D000209 ORTHO05D000129 1.2e-18 97.1 182 33.5
BcaC01g03433 Brassica carinata HOM05D000209 ORTHO05D000129 2.0e-18 96.3 180 33.3
C03p52640 Brassica napus HOM05D000209 ORTHO05D000129 2.0e-18 96.3 180 33.3
Carub.0003s0962 Capsella rubella HOM05D000209 ORTHO05D000129 2.0e-18 96.3 177 32.8
BcaB03g16794 Brassica carinata HOM05D000209 ORTHO05D000129 3.4e-18 95.5 184 37.5
BolC3t17532H Brassica oleracea HOM05D000209 ORTHO05D000129 4.5e-18 95.1 180 33.3
BraA03t13432Z Brassica rapa HOM05D000209 ORTHO05D000129 5.9e-18 94.7 180 33.3
BcaC05g29465 Brassica carinata HOM05D000903 ORTHO05D000731 1.0e-17 94.0 148 35.8
BcaC09g48092 Brassica carinata HOM05D000209 ORTHO05D000129 1.3e-17 93.6 172 33.1
Carub.0003s0964 Capsella rubella HOM05D000209 ORTHO05D000129 1.3e-17 93.6 179 33.0
BcaC09g48095 Brassica carinata HOM05D000209 ORTHO05D000129 2.2e-17 92.8 181 35.9
Carub.0003s0963 Capsella rubella HOM05D000209 ORTHO05D000129 2.2e-17 92.8 177 34.5
Aa31LG8G9160 Aethionema arabicum HOM05D000209 ORTHO05D000129 5.0e-17 91.7 179 31.8
Carub.0006s3259 Capsella rubella HOM05D000209 ORTHO05D000129 1.4e-16 90.1 190 31.6
A03p42860 Brassica napus HOM05D000209 ORTHO05D000129 3.2e-16 89.0 180 31.7
AT3G22650 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 9.4e-16 87.4 179 31.3
CARHR098530 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.6e-15 86.7 179 30.7
BcaB04g21204 Brassica carinata HOM05D000209 ORTHO05D000129 2.1e-15 86.3 146 35.6
BcaB05g21734 Brassica carinata HOM05D000209 ORTHO05D032056 2.1e-15 86.3 147 36.7
Thhalv10022403m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.6e-15 85.5 179 31.8
Aa31LG8G9170 Aethionema arabicum HOM05D000209 ORTHO05D000129 1.4e-14 83.6 178 30.3
CARHR099050 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.4e-14 83.6 150 33.3
C03p00590 Brassica napus HOM05D000209 ORTHO05D000129 3.0e-14 82.4 181 32.0
BolC3t12624H Brassica oleracea HOM05D000209 ORTHO05D000129 3.0e-14 82.4 181 32.0
BcaB01g06091 Brassica carinata HOM05D000209 ORTHO05D000129 3.9e-14 82.0 181 32.0
BcaB01g06092 Brassica carinata HOM05D000209 ORTHO05D000129 3.9e-14 82.0 181 32.0
CARHR044120 Cardamine hirsuta HOM05D000209 ORTHO05D000129 5.2e-14 81.6 190 29.5
C07p01420 Brassica napus HOM05D000209 ORTHO05D000129 1.5e-13 80.1 173 30.6
BcaB04g19209 Brassica carinata HOM05D000209 ORTHO05D000129 2.6e-13 79.3 179 29.1
AT3G10430 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.7e-13 78.2 176 31.8
BraA03t09598Z Brassica rapa HOM05D000209 ORTHO05D000129 7.4e-13 77.8 178 30.9
Carub.0003s2280 Capsella rubella HOM05D000209 ORTHO05D000129 7.4e-13 77.8 181 29.8
CARHR097380 Cardamine hirsuta HOM05D000209 ORTHO05D000129 7.4e-13 77.8 182 29.1
BcaC09g48094 Brassica carinata HOM05D000209 ORTHO05D000129 1.7e-12 76.6 145 31.7
Thhalv10027458m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.7e-12 75.5 185 32.4
Aa31LG8G9180 Aethionema arabicum HOM05D000209 ORTHO05D000129 1.4e-11 73.6 178 28.1
A03p50240 Brassica napus HOM05D000209 ORTHO05D000129 1.8e-11 73.2 185 30.3
C07p48430 Brassica napus HOM05D000209 ORTHO05D000129 1.8e-11 73.2 185 30.3
C07p48490 Brassica napus HOM05D000209 ORTHO05D000129 7.0e-11 71.2 185 29.7
BolC7t45354H Brassica oleracea HOM05D000209 ORTHO05D000129 7.0e-11 71.2 185 29.7
BolC7t45357H Brassica oleracea HOM05D000209 ORTHO05D000129 7.0e-11 71.2 185 29.7
BcaB01g05954 Brassica carinata HOM05D000209 ORTHO05D000129 9.1e-11 70.9 179 30.2
Thhalv10027211m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 9.1e-11 70.9 187 33.2
AL3G35490 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.0e-10 69.7 180 27.8
Thhalv10024004m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.6e-10 69.3 170 32.4
BcaC03g14676 Brassica carinata HOM05D000209 ORTHO05D000129 4.5e-10 68.6 178 30.3
A02p13030 Brassica napus HOM05D000209 ORTHO05D000129 4.5e-10 68.6 178 30.3
C02p21150 Brassica napus HOM05D000209 ORTHO05D000129 4.5e-10 68.6 178 28.1
BolC2t08255H Brassica oleracea HOM05D000209 ORTHO05D000129 4.5e-10 68.6 178 30.3
BraA02t06359Z Brassica rapa HOM05D000209 ORTHO05D000129 4.5e-10 68.6 178 30.3
Aa31LG8G9220 Aethionema arabicum HOM05D000209 ORTHO05D000129 1.0e-09 67.4 177 28.2
Thhalv10000601m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.3e-09 67.0 185 29.2
AL5G33670 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.9e-09 65.9 114 33.3
BraA03t12824Z Brassica rapa HOM05D000209 ORTHO05D000129 6.5e-09 64.7 80 46.2
AT1G77650 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.1e-08 63.9 198 25.3
BcaB01g05926 Brassica carinata HOM05D000209 ORTHO05D000129 5.5e-08 61.6 192 26.0
A03p01940 Brassica napus HOM05D000209 ORTHO05D000129 5.5e-08 61.6 192 26.0
BolC3t12782H Brassica oleracea HOM05D000209 ORTHO05D000129 5.5e-08 61.6 192 26.0
BraA03t09563Z Brassica rapa HOM05D000209 ORTHO05D000129 5.5e-08 61.6 192 26.0
A03p36580 Brassica napus HOM05D000209 ORTHO05D000129 1.2e-07 60.5 96 38.5
C03p44200 Brassica napus HOM05D000209 ORTHO05D032056 1.8e-06 56.6 118 32.2
BolC3t16692H Brassica oleracea HOM05D000209 ORTHO05D032056 1.8e-06 56.6 118 32.2
C05p57680 Brassica napus HOM05D000209 ORTHO05D000129 8.8e-06 54.3 85 36.5
BolC5t34425H Brassica oleracea HOM05D000209 ORTHO05D000129 8.8e-06 54.3 85 36.5


User provided reference genes

Program Settings