Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10021904m.g Eutrema salsugineum HOM05D006153 ORTHO05D007701 8.6e-46 186.4 82 100.0
Thhalv10021914m.g Eutrema salsugineum HOM05D006153 ORTHO05D007701 1.0e-30 136.3 67 89.6
Sp3g17600 Schrenkiella parvula HOM05D006153 ORTHO05D007701 1.7e-30 135.6 67 91.0
BcaB06g26014 Brassica carinata HOM05D006153 ORTHO05D007701 3.9e-30 134.4 67 86.6
BcaB04g20696 Brassica carinata HOM05D006153 ORTHO05D007701 4.3e-29 131.0 67 86.6
BcaC09g48920 Brassica carinata HOM05D006153 ORTHO05D007701 4.3e-29 131.0 67 88.1
C01p44580 Brassica napus HOM05D006153 ORTHO05D007701 4.3e-29 131.0 67 88.1
A01p35130 Brassica napus HOM05D006153 ORTHO05D007701 9.6e-29 129.8 67 86.6
BraA01t03595Z Brassica rapa HOM05D006153 ORTHO05D007701 9.6e-29 129.8 67 86.6
BolC1t04422H Brassica oleracea HOM05D006153 ORTHO05D007701 1.6e-28 129.0 67 86.6
BcaC05g28465 Brassica carinata HOM05D006153 ORTHO05D007701 2.1e-28 128.6 67 85.1
A01p35140 Brassica napus HOM05D006153 ORTHO05D007701 2.1e-28 128.6 66 87.9
C05p45510 Brassica napus HOM05D006153 ORTHO05D007701 2.1e-28 128.6 67 85.1
BolC5t33274H Brassica oleracea HOM05D006153 ORTHO05D007701 2.1e-28 128.6 67 85.1
BraA01t03596Z Brassica rapa HOM05D006153 ORTHO05D007701 2.1e-28 128.6 66 87.9
A05p30090 Brassica napus HOM05D006153 ORTHO05D007701 3.6e-28 127.9 67 85.1
BraA05t21849Z Brassica rapa HOM05D006153 ORTHO05D007701 3.6e-28 127.9 67 85.1
BcaB04g20697 Brassica carinata HOM05D006153 ORTHO05D007701 3.4e-26 121.3 67 82.1
AL3G32960 Arabidopsis lyrata HOM05D006153 ORTHO05D007701 6.0e-23 110.5 68 76.5
AT3G19550 Arabidopsis thaliana HOM05D006153 ORTHO05D007701 3.9e-22 107.8 67 74.6
CARHR094970 Cardamine hirsuta HOM05D006153 ORTHO05D007701 5.1e-22 107.5 58 82.8
Carub.0003s1938 Capsella rubella HOM05D006153 ORTHO05D007701 7.4e-21 103.6 65 73.8
Actinidia34374 Actinidia chinensis HOM05D006153 ORTHO05D007701 1.1e-16 89.7 68 58.8
GSVIVG01037871001 Vitis vinifera HOM05D006153 ORTHO05D007701 1.6e-15 85.9 75 49.3
GSVIVG01037872001 Vitis vinifera HOM05D006153 ORTHO05D007701 4.6e-15 84.3 62 58.1
Duzib132G0541 Durio zibethinus HOM05D006153 ORTHO05D007701 7.9e-15 83.6 56 62.5
GSVIVG01037873001 Vitis vinifera HOM05D006153 ORTHO05D007701 1.0e-14 83.2 52 65.4
Aa31LG8G6290 Aethionema arabicum HOM05D006153 ORTHO05D007701 1.8e-14 82.4 46 76.1
Migut.I00275 Erythranthe guttata HOM05D006153 ORTHO05D007701 1.8e-14 82.4 45 75.6
Nitab4.5_0001105g0220 Nicotiana tabacum HOM05D006153 ORTHO05D007701 1.8e-14 82.4 60 61.7
Nitab4.5_0004685g0060 Nicotiana tabacum HOM05D006153 ORTHO05D007701 1.8e-14 82.4 60 61.7
Peaxi162Scf00016g00267 Petunia axillaris HOM05D006153 ORTHO05D007701 2.3e-14 82.0 48 68.8
Potri.001G296900 Populus trichocarpa HOM05D006153 ORTHO05D007701 5.1e-14 80.9 55 60.0
PGR042G3678 Punica granatum HOM05D006153 ORTHO05D007701 8.7e-14 80.1 57 61.4
Dinv42217 Davidia involucrata HOM05D006153 ORTHO05D007701 1.5e-13 79.3 54 59.3
Duzib052G0610 Durio zibethinus HOM05D006153 ORTHO05D007701 1.9e-13 79.0 54 63.0
Sabra09G0070400 Salix brachista HOM05D006153 ORTHO05D007701 2.5e-13 78.6 61 54.1
CSS0010428 Camellia sinensis var. sinensis HOM05D006153 ORTHO05D007701 3.3e-13 78.2 47 68.1
COL.COLO4_32545 Corchorus olitorius HOM05D006153 ORTHO05D007701 3.3e-13 78.2 67 55.2
Manes.07G064400 Manihot esculenta HOM05D006153 ORTHO05D007701 3.3e-13 78.2 50 64.0
Oeu013772.1 Olea europaea HOM05D006153 ORTHO05D007701 7.4e-13 77.0 49 63.3
Potri.009G091100 Populus trichocarpa HOM05D006153 ORTHO05D007701 7.4e-13 77.0 54 61.1
Rhsim05G0089900 Rhododendron simsii HOM05D006153 ORTHO05D007701 7.4e-13 77.0 53 66.0
Solyc01g107280.3 Solanum lycopersicum HOM05D006153 ORTHO05D007701 7.4e-13 77.0 50 64.0
Sopen01g049530 Solanum pennellii HOM05D006153 ORTHO05D007701 7.4e-13 77.0 50 64.0
Eucgr.G00438 Eucalyptus grandis HOM05D006153 ORTHO05D007701 1.3e-12 76.3 50 60.0
Gohir.A01G008400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 1.3e-12 76.3 49 63.3
PGSC0003DMG400025850 Solanum tuberosum HOM05D006153 ORTHO05D007701 1.3e-12 76.3 61 55.7
MD10G1102200 Malus domestica HOM05D006153 ORTHO05D007701 1.6e-12 75.9 48 70.8
CiPaw.05G015200 Carya illinoinensis HOM05D006153 ORTHO05D007701 2.1e-12 75.5 61 59.0
Gohir.D13G044400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 2.1e-12 75.5 53 60.4
Gorai.013G049200 Gossypium raimondii HOM05D006153 ORTHO05D007701 2.1e-12 75.5 53 60.4
Thecc.02G113400 Theobroma cacao HOM05D006153 ORTHO05D007701 2.1e-12 75.5 50 66.0
Sc14g0002580 Simmondsia chinensis HOM05D006153 ORTHO05D007701 2.8e-12 75.1 48 66.7
Peaxi162Scf00003g00261 Petunia axillaris HOM05D006153 ORTHO05D007701 4.8e-12 74.3 48 62.5
Haze_10254 Corylus avellana HOM05D006153 ORTHO05D007701 6.2e-12 73.9 56 58.9
MD05G1096000 Malus domestica HOM05D006153 ORTHO05D007701 6.2e-12 73.9 48 68.8
TAR381G0917 Trochodendron aralioides HOM05D006153 ORTHO05D007701 8.2e-12 73.6 47 63.8
Cpa.g.sc200.7 Carica papaya HOM05D006153 ORTHO05D007701 1.1e-11 73.2 46 69.6
arahy.Tifrunner.gnm1.ann1.EHR7LK Arachis hypogaea HOM05D006153 ORTHO05D007701 1.4e-11 72.8 67 53.7
Lalb_Chr06g0165291 Lupinus albus HOM05D006153 ORTHO05D007701 1.8e-11 72.4 60 53.3
QL11p031990 Quercus lobata HOM05D006153 ORTHO05D007701 1.8e-11 72.4 71 46.5
Nitab4.5_0012681g0010 Nicotiana tabacum HOM05D006153 ORTHO05D007701 3.1e-11 71.6 47 61.7
Peaxi162Scf00152g00320 Petunia axillaris HOM05D006153 ORTHO05D007701 3.1e-11 71.6 58 53.4
Haze_10299 Corylus avellana HOM05D006153 ORTHO05D007701 4.0e-11 71.2 47 61.7
PSO541G5112 Papaver somniferum HOM05D006153 ORTHO05D007701 4.0e-11 71.2 50 58.0
Gorai.002G009800 Gossypium raimondii HOM05D006153 ORTHO05D007701 5.3e-11 70.9 49 59.2
Manes.10G074900 Manihot esculenta HOM05D006153 ORTHO05D007701 5.3e-11 70.9 47 61.7
Nn5g30510 Nelumbo nucifera HOM05D006153 ORTHO05D007701 5.3e-11 70.9 57 56.1
Prupe.8G140400 Prunus persica HOM05D006153 ORTHO05D007701 5.3e-11 70.9 48 66.7
Sabra16G0186000 Salix brachista HOM05D006153 ORTHO05D007701 5.3e-11 70.9 46 60.9
CANSAT25G0942 Cannabis sativa HOM05D006153 ORTHO05D007701 6.9e-11 70.5 48 64.6
Lalb_Chr02g0145121 Lupinus albus HOM05D006153 ORTHO05D007701 6.9e-11 70.5 54 55.6
Nitab4.5_0002017g0030 Nicotiana tabacum HOM05D006153 ORTHO05D007701 6.9e-11 70.5 47 61.7
Actinidia27982 Actinidia chinensis HOM05D006153 ORTHO05D007701 9.0e-11 70.1 62 51.6
Dinv15786 Davidia involucrata HOM05D006153 ORTHO05D007701 9.0e-11 70.1 55 61.8
QL11p029270 Quercus lobata HOM05D006153 ORTHO05D007701 9.0e-11 70.1 52 59.6
TWI23G0900 Tripterygium wilfordii HOM05D006153 ORTHO05D007701 1.5e-10 69.3 53 64.2
Phvul.007G043000 Phaseolus vulgaris HOM05D006153 ORTHO05D007701 2.0e-10 68.9 58 55.2
DCAR_001679 Daucus carota HOM05D006153 ORTHO05D007701 4.5e-10 67.8 48 56.2
Ciclev10029838m.g Citrus clementina HOM05D006153 ORTHO05D007701 5.8e-10 67.4 53 60.4
Haze_10289 Corylus avellana HOM05D006153 ORTHO05D007701 1.0e-09 66.6 63 42.9
FvH4_2g04480 Fragaria vesca HOM05D006153 ORTHO05D007701 1.0e-09 66.6 49 63.3
FAN20G1027 Fragaria x ananassa HOM05D006153 ORTHO05D007701 1.0e-09 66.6 49 63.3
FAN24G1230 Fragaria x ananassa HOM05D006153 ORTHO05D007701 1.0e-09 66.6 49 63.3
FAN27G0726 Fragaria x ananassa HOM05D006153 ORTHO05D007701 1.0e-09 66.6 49 63.3
Glyma.20G131700 Glycine max HOM05D006153 ORTHO05D007701 1.3e-09 66.2 44 59.1
Lj1g0020403 Lotus japonicus HOM05D006153 ORTHO05D007701 1.3e-09 66.2 55 56.4
MBI16_g15146_MAGBIO Magnolia biondii HOM05D006153 ORTHO05D007701 1.3e-09 66.2 47 57.4
ATR0030G019 Amborella trichopoda HOM05D006153 ORTHO05D007701 1.7e-09 65.9 44 56.8
RcHm_v2.0_Chr6g0253971 Rosa chinensis HOM05D006153 ORTHO05D007701 1.7e-09 65.9 49 65.3
VMungo0720G0345 Vigna mungo HOM05D006153 ORTHO05D007701 2.2e-09 65.5 44 61.4
Cfa004694 Carpinus fangiana HOM05D006153 ORTHO05D007701 2.9e-09 65.1 51 52.9
FAN15G1936 Fragaria x ananassa HOM05D006153 ORTHO05D007701 2.9e-09 65.1 49 65.3
Hund06709 Selenicereus undatus HOM05D006153 ORTHO05D007701 2.9e-09 65.1 49 59.2
DCAR_001674 Daucus carota HOM05D006153 ORTHO05D007701 6.5e-09 63.9 49 53.1
Cfa004655 Carpinus fangiana HOM05D006153 ORTHO05D007701 8.4e-09 63.5 48 62.5
DCAR_003609 Daucus carota HOM05D006153 ORTHO05D007701 8.4e-09 63.5 45 62.2
Glyma.10G259200 Glycine max HOM05D006153 ORTHO05D007701 1.1e-08 63.2 44 56.8
Hma1.2p1_1174F.1_g263880 Hydrangea macrophylla HOM05D006153 ORTHO05D007701 1.1e-08 63.2 47 57.4
Aqoxy6G02752 Aquilegia oxysepala HOM05D006153 ORTHO05D007701 1.4e-08 62.8 50 56.0
AUR62031329 Chenopodium quinoa HOM05D006153 ORTHO05D007701 1.9e-08 62.4 63 42.9
HanXRQChr16g0514451 Helianthus annuus HOM05D006153 ORTHO05D007701 2.5e-08 62.0 49 55.1
HanXRQChr13g0425861 Helianthus annuus HOM05D006153 ORTHO05D007701 3.2e-08 61.6 39 61.5
Lj5g0020623 Lotus japonicus HOM05D006153 ORTHO05D007701 3.2e-08 61.6 41 58.5
Sed0025917 Sechium edule HOM05D006153 ORTHO05D007701 3.2e-08 61.6 47 57.4
SGA_v2.0_scaffold624G53237 Striga asiatica HOM05D006153 ORTHO05D007701 4.2e-08 61.2 42 61.9
AUR62027357 Chenopodium quinoa HOM05D006153 ORTHO05D007701 7.1e-08 60.5 50 50.0
EL10Ac8g19360 Beta vulgaris HOM05D006153 ORTHO05D007701 9.3e-08 60.1 55 49.1
ClCG02G006680 Citrullus lanatus HOM05D006153 ORTHO05D007701 1.6e-07 59.3 48 52.1
Lj5g0024415 Lotus japonicus HOM05D006153 ORTHO05D007701 1.6e-07 59.3 39 59.0
CsaV3_7G007950 Cucumis sativus L. HOM05D006153 ORTHO05D007701 3.5e-07 58.2 54 46.3
Eucgr.G01281 Eucalyptus grandis HOM05D006153 ORTHO05D007701 3.5e-07 58.2 41 61.0
HanXRQChr16g0514921 Helianthus annuus HOM05D006153 ORTHO05D007701 3.5e-07 58.2 42 54.8
HanXRQChr16g0514901 Helianthus annuus HOM05D006153 ORTHO05D007701 7.9e-07 57.0 39 59.0
Lsat_1_v5_gn_5_114460 Lactuca sativa HOM05D006153 ORTHO05D007701 1.3e-06 56.2 42 54.8
MELO3C018509.2 Cucumis melo HOM05D006153 ORTHO05D007701 2.3e-06 55.5 54 48.1
HanXRQChr16g0514461 Helianthus annuus HOM05D006153 ORTHO05D007701 3.0e-06 55.1 58 46.6
Os12g0507700 Oryza sativa ssp. japonica HOM05D006153 ORTHO05D007701 3.0e-06 55.1 46 52.2


User provided reference genes

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