Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 3.7e-123 444.9 227 100.0
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 5.2e-109 397.9 228 88.6
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 7.1e-106 387.5 226 85.8
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 7.6e-100 367.5 227 82.8
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 1.7e-99 366.3 228 78.9
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 7.1e-98 360.9 226 81.9
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 9.3e-98 360.5 225 82.2
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 1.2e-97 360.1 229 83.4
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 3.5e-97 358.6 227 81.1
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 7.8e-97 357.5 228 82.9
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 5.3e-93 344.7 229 77.3
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 2.0e-84 316.2 228 70.2
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 4.6e-81 305.1 196 79.6
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 1.3e-72 276.9 231 62.3
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 8.7e-72 274.2 233 59.2
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 1.9e-71 273.1 233 59.2
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 9.6e-71 270.8 229 61.1
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 1.1e-69 267.3 209 63.2
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 1.1e-69 267.3 209 63.2
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 1.1e-69 267.3 233 60.5
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 1.8e-69 266.5 234 59.0
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 3.1e-69 265.8 231 59.7
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 1.2e-68 263.8 169 79.9
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 2.0e-68 263.1 231 56.7
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 2.0e-68 263.1 238 58.0
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 4.5e-68 261.9 209 62.2
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 5.8e-68 261.5 231 58.0
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 5.8e-68 261.5 230 58.7
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 1.7e-67 260.0 235 57.4
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 5.0e-67 258.5 203 64.0
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 6.5e-67 258.1 211 61.1
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 1.9e-66 256.5 209 59.8
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 1.9e-66 256.5 235 57.0
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 1.9e-66 256.5 229 55.9
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 1.9e-66 256.5 230 56.5
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 2.5e-66 256.1 235 57.4
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 7.1e-66 254.6 231 57.6
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.1e-65 253.1 243 56.8
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 6.1e-65 251.5 232 54.3
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 7.9e-65 251.1 229 55.9
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 1.8e-64 250.0 229 55.5
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 1.8e-64 250.0 230 53.9
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 2.3e-64 249.6 229 55.5
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 8.7e-64 247.7 219 59.8
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 1.5e-63 246.9 238 58.4
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 1.9e-63 246.5 207 61.4
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 2.5e-63 246.1 213 57.7
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 5.7e-63 245.0 236 56.4
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 5.7e-63 245.0 209 58.9
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 9.7e-63 244.2 209 57.9
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 1.3e-62 243.8 231 53.2
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 1.3e-62 243.8 216 60.2
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 1.6e-62 243.4 226 54.9
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 3.7e-62 242.3 235 55.7
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 4.8e-62 241.9 232 53.0
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 6.3e-62 241.5 236 53.4
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 8.2e-62 241.1 234 52.6
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 1.4e-61 240.4 225 53.8
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 1.4e-61 240.4 233 53.6
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 1.8e-61 240.0 210 59.5
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 2.4e-61 239.6 245 54.7
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 2.4e-61 239.6 215 60.0
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 9.0e-61 237.7 222 57.7
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 4.5e-60 235.3 230 55.2
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 7.7e-60 234.6 232 53.4
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 7.2e-58 228.0 241 51.5
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 7.2e-58 228.0 245 51.4
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 2.1e-57 226.5 237 51.5
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 4.6e-57 225.3 180 60.6
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 1.8e-56 223.4 227 49.8
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 3.9e-56 222.2 209 56.9
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 3.9e-56 222.2 209 56.9
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 6.7e-56 221.5 278 46.0
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 1.1e-55 220.7 215 52.6
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 1.1e-55 220.7 280 47.5
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 2.5e-55 219.5 194 59.8
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 3.3e-55 219.2 231 53.7
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 4.8e-54 215.3 233 51.9
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 5.9e-52 208.4 234 48.7
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 1.0e-51 207.6 259 47.1
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 1.3e-51 207.2 215 50.7
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 6.5e-51 204.9 223 48.9
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 8.5e-51 204.5 184 57.1
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 1.9e-50 203.4 215 52.6
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 4.7e-49 198.7 231 50.2
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 5.1e-48 195.3 171 60.2
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 1.1e-47 194.1 244 48.8
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 1.1e-47 194.1 175 59.4
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 3.1e-45 186.0 174 55.7
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.2e-44 184.1 169 58.0
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 1.0e-43 181.0 192 51.6
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 4.2e-42 175.6 210 44.8
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 4.7e-41 172.2 147 54.4
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 1.4e-40 170.6 136 63.2
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 5.2e-40 168.7 205 46.8
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 6.7e-40 168.3 232 43.5
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 5.7e-39 165.2 162 54.9
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 1.2e-36 157.5 231 43.3
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 1.3e-35 154.1 200 43.0
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 3.2e-34 149.4 198 45.5
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 4.2e-34 149.1 146 54.1
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.3e-32 143.3 141 54.6
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 6.3e-30 135.2 156 50.6
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 9.8e-23 111.3 113 51.3
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 5.6e-18 95.5 154 42.2
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 2.3e-16 90.1 181 33.7
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 2.3e-16 90.1 155 34.2
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 5.7e-15 85.5 55 67.3
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.7e-14 82.8 81 58.0
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.2e-13 79.7 57 70.2
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 5.4e-13 79.0 72 51.4
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.0e-12 77.0 63 58.7
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 4.7e-09 65.9 80 47.5
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.0e-08 64.7 177 33.9
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 4.0e-08 62.8 148 29.7
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 1.7e-06 57.4 54 50.0
CAN.G1161.15 Capsicum annuum HOM05D000064 ORTHO05D007563 6.4e-06 55.5 38 57.9


User provided reference genes

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