Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 2.1e-177 625.5 313 100.0
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 1.3e-163 579.7 312 90.7
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 2.1e-161 572.4 313 90.1
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 5.8e-159 564.3 313 89.5
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 9.9e-159 563.5 311 90.0
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 6.4e-158 560.8 313 89.1
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 6.4e-158 560.8 313 89.1
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 1.1e-157 560.1 307 89.9
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 1.4e-157 559.7 313 88.5
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 3.0e-155 552.0 301 90.7
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 3.9e-155 551.6 313 88.2
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 1.9e-154 549.3 309 87.7
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 1.9e-154 549.3 309 87.7
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 1.1e-152 543.5 313 86.6
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 3.4e-151 538.5 317 85.5
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 9.3e-149 530.4 288 90.3
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 1.3e-147 526.6 288 91.0
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 4.2e-141 505.0 285 87.4
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 8.5e-118 427.6 300 67.0
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 1.5e-114 416.8 309 62.1
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 1.3e-113 413.7 303 64.7
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 1.7e-113 413.3 309 65.0
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 6.3e-113 411.4 304 65.1
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 1.1e-112 410.6 305 63.6
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 1.1e-112 410.6 290 64.5
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 4.1e-112 408.7 307 63.8
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 5.3e-112 408.3 304 63.5
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 5.3e-112 408.3 309 62.8
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 7.0e-112 407.9 301 63.1
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 1.6e-111 406.8 290 63.1
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 4.5e-111 405.2 308 61.7
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 4.5e-111 405.2 292 63.4
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 1.0e-110 404.1 307 63.2
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 3.2e-109 399.1 300 61.7
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 4.2e-109 398.7 305 61.3
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 1.2e-108 397.1 290 62.8
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 1.2e-108 397.1 298 63.4
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 1.2e-108 397.1 301 63.1
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 1.6e-108 396.7 303 61.1
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 1.6e-108 396.7 292 63.4
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 2.1e-108 396.4 307 62.9
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 2.7e-108 396.0 299 61.9
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 5.2e-107 391.7 289 63.0
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 2.2e-105 386.3 289 61.2
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 4.8e-105 385.2 311 58.8
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 8.2e-105 384.4 302 60.6
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 1.8e-104 383.3 302 59.9
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 5.3e-104 381.7 311 58.5
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 7.0e-104 381.3 280 66.1
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 9.1e-104 380.9 301 57.1
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 7.7e-103 377.9 301 56.8
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 3.8e-102 375.6 307 58.3
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 1.1e-101 374.0 304 59.2
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 5.5e-101 371.7 320 56.2
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 9.4e-101 370.9 304 58.9
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.2e-100 370.5 300 58.7
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.6e-100 370.2 300 59.0
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 8.8e-99 364.4 299 55.9
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.5e-98 363.6 300 57.7
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 9.8e-98 360.9 305 57.7
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 7.0e-96 354.8 303 55.4
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 9.1e-96 354.4 278 58.6
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 1.2e-95 354.0 296 56.4
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 1.3e-94 350.5 301 56.8
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 1.7e-94 350.1 309 55.0
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 1.1e-93 347.4 260 63.8
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 4.2e-93 345.5 297 56.2
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 2.1e-92 343.2 288 55.6
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 5.2e-91 338.6 435 42.8
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 4.4e-90 335.5 261 59.8
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 1.4e-88 330.5 237 64.6
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 2.4e-88 329.7 306 52.3
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 2.4e-88 329.7 304 53.6
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 4.5e-87 325.5 392 44.4
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 5.9e-87 325.1 256 60.5
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 1.3e-86 323.9 300 53.7
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 4.3e-85 318.9 342 50.6
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 7.3e-85 318.2 249 60.6
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 2.8e-84 316.2 279 53.8
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 8.0e-84 314.7 239 60.7
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 1.4e-83 313.9 296 52.4
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 2.0e-82 310.1 349 49.3
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 2.6e-82 309.7 309 50.2
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 2.7e-79 299.7 236 59.7
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 2.7e-79 299.7 265 55.5
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 3.6e-76 289.3 231 64.1
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 6.2e-76 288.5 235 57.0
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 1.4e-72 277.3 284 47.9
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 2.3e-70 270.0 210 60.5
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 1.8e-67 260.4 298 47.7
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 6.8e-67 258.5 309 43.4
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 2.9e-65 253.1 203 59.6
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 1.9e-64 250.4 194 62.4
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 7.3e-61 238.4 128 89.1
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 4.6e-55 219.2 171 60.2
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 3.1e-51 206.5 145 66.9
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 1.2e-50 204.5 283 42.0
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 5.8e-50 202.2 310 38.1
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 2.9e-49 199.9 192 52.1
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 1.0e-46 191.4 147 57.8
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 5.1e-46 189.1 192 49.5
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 6.6e-46 188.7 141 61.0
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 2.8e-44 183.3 306 35.3
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 6.9e-43 178.7 104 72.1
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 7.1e-40 168.7 406 31.3
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 4.6e-39 166.0 79 94.9
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 4.6e-39 166.0 224 37.1
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 3.9e-38 162.9 135 55.6
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 2.9e-33 146.7 83 74.7
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 6.4e-33 145.6 98 64.3
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 4.3e-29 132.9 139 52.5
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 1.8e-27 127.5 92 58.7
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 6.9e-27 125.6 74 73.0
MCO04G525 Micromonas commoda HOM05D006689 ORTHO05D008349 2.6e-26 123.6 263 31.2
PRCOL_00001274 Prasinoderma coloniale HOM05D006689 ORTHO05D008349 1.3e-22 111.3 319 27.6
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 3.3e-21 106.7 333 26.7
RcHm_v2.0_Chr3g0475321 Rosa chinensis HOM05D006689 ORTHO05D008349 3.2e-16 90.1 63 65.1
Hma1.2p1_1624F.1_g294270 Hydrangea macrophylla HOM05D000554 ORTHO05D000860 6.5e-09 65.9 44 61.4
Sabra16G0075600 Salix brachista HOM05D006689 ORTHO05D008349 1.1e-08 65.1 46 58.7
Cfa021542 Carpinus fangiana HOM05D000750 ORTHO05D011662 4.7e-07 59.7 47 57.4
arahy.Tifrunner.gnm1.ann1.HW4B1R Arachis hypogaea HOM05D006689 ORTHO05D008349 3.9e-06 56.6 36 63.9


User provided reference genes

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