Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 1.9e-217 758.8 362 100.0
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 2.7e-208 728.4 362 96.1
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 2.3e-207 725.3 362 95.0
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 2.3e-207 725.3 362 95.0
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 2.3e-207 725.3 362 95.0
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 2.3e-207 725.3 362 94.8
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 5.6e-206 720.7 359 95.0
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 2.0e-203 712.2 362 93.1
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 8.4e-202 706.8 362 92.3
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 1.3e-199 699.5 362 92.0
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 2.3e-199 698.7 362 91.7
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 3.3e-198 694.9 362 91.2
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 2.1e-197 692.2 359 91.6
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 2.8e-197 691.8 359 91.6
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 8.1e-197 690.3 359 91.4
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 1.6e-192 676.0 391 84.4
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 7.9e-192 673.7 359 88.3
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 7.1e-185 650.6 360 83.9
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 1.2e-184 649.8 339 91.4
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.2e-184 649.8 360 84.4
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 1.3e-183 646.4 360 84.4
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 3.9e-183 644.8 359 83.3
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 3.9e-183 644.8 360 83.1
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 3.3e-182 641.7 359 82.7
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 3.3e-182 641.7 359 82.5
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 5.7e-182 641.0 359 83.3
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 9.6e-182 640.2 359 82.7
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 2.1e-181 639.0 359 82.7
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 4.8e-181 637.9 359 83.3
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 8.2e-181 637.1 359 83.0
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 1.1e-180 636.7 359 83.0
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 1.4e-180 636.3 359 82.7
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 1.4e-180 636.3 359 83.0
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 1.8e-180 636.0 360 82.8
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 5.3e-180 634.4 360 83.1
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 1.5e-179 632.9 358 83.0
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 2.0e-179 632.5 359 81.3
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 3.4e-179 631.7 358 82.7
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 3.4e-179 631.7 359 81.9
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 3.4e-179 631.7 359 81.9
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 3.4e-179 631.7 359 82.2
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 4.5e-179 631.3 359 81.6
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 4.5e-179 631.3 359 81.9
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 1.0e-178 630.2 359 80.5
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 1.0e-178 630.2 359 81.9
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 1.7e-178 629.4 359 81.3
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 1.7e-178 629.4 359 81.6
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 2.2e-178 629.0 359 81.3
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 5.0e-178 627.9 359 82.2
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 6.5e-178 627.5 359 82.2
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 6.5e-178 627.5 359 81.6
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 8.5e-178 627.1 359 81.1
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 1.1e-177 626.7 395 76.7
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 1.4e-177 626.3 359 82.5
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 1.9e-177 625.9 359 81.9
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 5.5e-177 624.4 358 82.1
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 5.5e-177 624.4 358 82.1
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 7.2e-177 624.0 360 80.6
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 7.2e-177 624.0 359 80.8
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.2e-176 623.2 358 81.8
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 2.7e-176 622.1 359 81.6
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 3.6e-176 621.7 361 80.3
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 6.1e-176 620.9 359 79.4
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 1.0e-175 620.2 359 81.6
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 1.0e-175 620.2 358 81.3
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 3.9e-175 618.2 359 80.2
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 5.1e-175 617.8 359 79.9
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.1e-174 616.7 358 81.3
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 1.9e-174 615.9 359 79.9
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 4.3e-174 614.8 359 80.2
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 5.7e-174 614.4 357 80.1
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 2.8e-173 612.1 359 79.4
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 3.7e-173 611.7 359 80.5
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 4.8e-173 611.3 359 78.8
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 1.4e-172 609.8 357 79.3
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 6.9e-172 607.4 360 76.7
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 9.0e-172 607.1 385 75.3
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 1.2e-171 606.7 359 78.8
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 1.5e-171 606.3 369 77.5
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 7.7e-171 604.0 359 78.6
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 1.4e-169 599.7 343 81.0
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 2.5e-169 599.0 359 77.2
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 9.4e-169 597.0 359 76.9
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 2.7e-168 595.5 426 69.0
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 2.7e-168 595.5 401 71.3
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 1.0e-167 593.6 417 70.3
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 5.1e-167 591.3 359 76.3
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 2.6e-166 589.0 358 77.7
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 4.4e-166 588.2 360 76.4
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 1.7e-165 586.3 359 76.9
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 1.4e-164 583.2 359 75.5
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 1.2e-160 570.1 368 72.6
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 3.9e-159 565.1 359 74.7
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 5.7e-158 561.2 313 83.4
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 2.8e-157 558.9 368 69.8
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 2.8e-157 558.9 358 72.6
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 7.5e-150 534.3 359 72.1
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 1.4e-148 530.0 360 69.7
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 2.9e-146 522.3 304 81.6
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 6.5e-146 521.2 314 77.4
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 2.5e-145 519.2 359 69.4
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 6.8e-143 511.1 359 68.0
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 2.0e-142 509.6 308 78.6
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 7.0e-140 501.1 348 70.1
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 1.6e-136 490.0 359 65.7
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 4.0e-135 485.3 405 60.2
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 3.0e-127 459.1 369 60.7
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 2.0e-126 456.4 249 85.1
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 1.2e-123 447.2 359 63.0
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 1.6e-123 446.8 240 86.7
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 2.5e-121 439.5 371 61.7
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 1.9e-113 413.3 239 80.3
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 4.3e-113 412.1 206 95.1
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 1.6e-99 367.1 213 78.4
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 7.1e-76 288.5 164 84.8
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 5.5e-60 235.7 149 72.5
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 1.7e-53 214.2 156 66.0
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 1.4e-50 204.5 121 75.2
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 9.7e-49 198.4 331 38.4
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 2.2e-48 197.2 128 71.9
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 1.1e-44 184.9 203 50.2
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 1.3e-37 161.4 98 79.6
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 1.3e-32 144.8 117 60.7
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 1.7e-24 117.9 55 94.5
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 8.3e-24 115.5 107 56.1
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 3.6e-19 100.1 162 41.4
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 1.8e-18 97.8 79 59.5
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 2.4e-15 87.4 38 97.4
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 1.9e-12 77.8 52 67.3
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 2.9e-08 63.9 233 27.5


User provided reference genes

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